Gene

KWMTBOMO16119

Pre Gene Modal

BGIBMGA004510

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr27(+):9581546-9585049      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.923

CDS

ATGTGCCGTATAAGACGATGGAAAACGCCGTTTTTAAAACAGTGTCTTGTGATCTCCAGTGTAACTTTTAATATGATTTCATATGGTTTCGCATTTGGATTTAACGCTTCTTTAATCACATCATTAAGGAAGACAAATGAGATCCCACTGAATAGAGACTCGGAGTCGTGGTTGGCATCAGTCCTCGGATTATTCATATTCATTGGATCTATTATCACCTGTATTATCATGAAATACATCGGGCGAAGATTTTCTTTCCTACTCAGCTCTATTATAATAATATGCTCATGGATTTTATTTACATTATCTTCATCTTTCCTTGAATTATTAATCGCAAAAATCCTACAAGGTATAACGGTTGGATTGGGCAGCTTAGGATCCAATTTGATCGGGGAATATTCCAGTCCAAAATATAGAGCCTCTTTCATAGCAACTATACCGACTGGTTTGTTATTCGGTGAATTGCTGATTCATTGCCTTGGATTGATTTGCGAGTGGCGTGACGTGGCTTTAGTGATTGCCTTTCTCTGTTTACCGGGATTAATAGCAAGCGTATTTTCTCCTGAATCACCAAGCTTCCTGGTAACTAAAGGACGATACGATGAATGCAGGAAGGTGTTTCGTTGGTTGAGAGGAACGGACGAGGACACCGAACTCGAAGCAATGATTCAAACTGATAAAATTATTAAAGAAACAACAAAAAATTATCACAAACAAAGTTTAATAAAACTTTTTAAAGCTAAACTACTATACGTCTTGATTGTTTTCAGAAAACGTGAATTTCGTATTCCAATGATCATAATGATGCACTTGAATCTTATAAACCAATTCTGCGGTACTTTCGTTAACGATATGTACACCGTTGACATACACACGGCCATGTACGGTACCGATGCTTACATGTTTCAAACGGCTGCATCTTTGGATGTCCAAAGACTTGTGTCGACTATGCTAATGATATACGTGTCTTCTAAAGTACGAAGACGTCCACTCTTATTAGCCTTGGTGGGATTAAATGTATTGGCGTATCTATTGATAGCCGGTTACATATACGGTAGACGAAACAAAATTCTCCCTTTCGACCATATGGCTATAGGCATTATATTGCATCATTTTCATTTCTTCAGCATCGGAACTGGCTCCTTTCCATTGGTATTCATAATTAGTGGTGAAATATACCCTCTAACTGATAAAGGGTATTGTGTGTTGTTTTGCAGTATCCTTTATTCGATATACATGTTTACGAATATCAAAACCGCACCATATCTATTCTCTCTAATAGGTATAGAGGGTGCATTTTGTGTTTATGCTATATTACTGTTTTATTGTCTTGCTGTGACATTATATCTATTACCGGAGACCAAAGATAAGACCCTTCAAGAGATCGAGAATGAATTTAGAGGTTATGCTATAAATCACGAAACTGTCAAATTGAATGCTTAG

Protein

MCRIRRWKTPFLKQCLVISSVTFNMISYGFAFGFNASLITSLRKTNEIPLNRDSESWLASVLGLFIFIGSIITCIIMKYIGRRFSFLLSSIIIICSWILFTLSSSFLELLIAKILQGITVGLGSLGSNLIGEYSSPKYRASFIATIPTGLLFGELLIHCLGLICEWRDVALVIAFLCLPGLIASVFSPESPSFLVTKGRYDECRKVFRWLRGTDEDTELEAMIQTDKIIKETTKNYHKQSLIKLFKAKLLYVLIVFRKREFRIPMIIMMHLNLINQFCGTFVNDMYTVDIHTAMYGTDAYMFQTAASLDVQRLVSTMLMIYVSSKVRRRPLLLALVGLNVLAYLLIAGYIYGRRNKILPFDHMAIGIILHHFHFFSIGTGSFPLVFIISGEIYPLTDKGYCVLFCSILYSIYMFTNIKTAPYLFSLIGIEGAFCVYAILLFYCLAVTLYLLPETKDKTLQEIENEFRGYAINHETVKLNA

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9J4S0   E0X905   H9J4T7   H9J4U8   H9J4R7   D0PWZ5   + More
A0A212F161   A0A3S2P2D1   A0A0N1IHN6   A0A2H1WVP2   A0A212FJ74   A0A194QPY2   A0A194QJ23   A0A2W1BG84   A0A2A4KAY2   H9J4S1   A0A0N1IPS2   H9J4X7   H9J4R6   A0A023PNK9   H9J4X0   A0A3S2NWF9   A0A2A4JTG8   A0A0L7L8D8   A0A194QHU0   A0A2A4JT91   A0A2A4JUU3   A0A194QJI7   H9J4X1   A0A2W1BD78   A0A2H1W936   A0A2A4KA42   A0A2H1WAU6   A0A2H1WFL6   A0A2W1B9E8   A0A0N1I9K7   A0A2H1V0I3   A0A3S2LUZ6   A0A2A4J748   A0A0L7LQ31   H9J525   A0A2A4JU29   A0A194QKX0   A0A2W1BFI0   A0A212F9B1   A0A2H1WB04   A0A194QJ40   A0A2A4JSU4   A0A0L7L8F3   A0A194QJ47   A0A0L7KZR3   A0A212FCC0   H9J4X6   A0A2W1BBH7   A0A2H1W9B8   A0A0N1IG19   A0A212F9C9   A0A2A4JNG3   A0A194QJ80   A0A0N1IIX6   H9J539   H9J4W9   A0A194QJJ6   A0A3S2LEF2   A0A194QJ30   A0A0N0PE20   A0A0L7LRT2   A0A2A4KB29   A0A2A4J655   A0A2H1WK46   A0A2H1X0D6   A0A2W1BJW9   A0A2H1WX63   A0A336MJD0   A0A2W1BF54   A0A336M7L2   A0A2A4JBS9   A0A0L7KZ73   A0A0N0PEP7   A0A2A4JKJ9   A0A0N0PEE0   A0A182RRX2   E0X906   A0A182MLS9   A0A336MDU0   A0A182GCQ0   A0A182GTB3   A0A0N0PAH4   A0A2W1BJK8   A0A2H1WAF2   A0A2W1BN20   Q17LS5   A0A2W1BR72   A0A084VC86   H9J4X2   A0A182Y162   A0A182WKH8  

Pubmed

19121390    22118469    26354079    28756777    24730650    26227816    + More
26483478    17510324    24438588    25244985   

EMBL

BABH01035538    BABH01035539    GQ871755    ADM86146.1    BABH01035469    BABH01035543    + More
BABH01035544    FJ373021    ACQ66002.1    AGBW02010956    OWR47467.1    RSAL01000045    RVE50592.1    KQ460077    KPJ17887.1    ODYU01011356    SOQ57052.1    AGBW02008317    OWR53759.1    KQ458671    KPJ05561.1    KPJ05558.1    KZ150249    PZC71836.1    NWSH01000008    PCG80953.1    BABH01035527    BABH01035528    BABH01035529    KPJ17881.1    BABH01025717    BABH01035548    KJ439227    KZ150491    AHX25878.1    PZC70688.1    BABH01025733    RVE50589.1    NWSH01000704    PCG74682.1    JTDY01002352    KOB71610.1    KQ458981    KPJ04505.1    PCG74683.1    NWSH01000578    PCG75536.1    KPJ05554.1    BABH01025731    PZC71835.1    ODYU01007122    SOQ49615.1    PCG80949.1    SOQ49614.1    ODYU01008354    SOQ51875.1    PZC71838.1    KPJ17880.1    ODYU01000118    SOQ34347.1    RSAL01000181    RVE44925.1    NWSH01002771    PCG67556.1    JTDY01000342    KOB77618.1    BABH01038881    PCG75537.1    KPJ05555.1    KZ150133    PZC73021.1    AGBW02009614    OWR50324.1    ODYU01007347    SOQ50032.1    KPJ05573.1    PCG74684.1    KOB71609.1    KPJ05583.1    JTDY01004123    KOB68566.1    AGBW02009205    OWR51384.1    BABH01025720    PZC70687.1    SOQ49613.1    KPJ17891.1    OWR50323.1    NWSH01001042    PCG72950.1    KPJ05572.1    KPJ17884.1    BABH01038877    BABH01038878    BABH01038879    BABH01038880    KPJ05559.1    RVE44926.1    KPJ05563.1    KQ460126    KPJ17588.1    JTDY01000230    KOB78170.1    PCG80950.1    PCG67555.1    ODYU01009098    SOQ53272.1    ODYU01012470    SOQ58795.1    PZC73020.1    ODYU01011726    SOQ57638.1    UFQT01001316    SSX30005.1    PZC71837.1    UFQT01000224    SSX22028.1    NWSH01001973    PCG69525.1    KOB68563.1    KQ459890    KPJ19577.1    NWSH01001160    PCG72306.1    KPJ19576.1    GQ871756    ADM86147.1    AXCM01002831    UFQT01001016    SSX28504.1    JXUM01009472    KQ560284    KXJ83288.1    JXUM01086634    KQ563580    KXJ73638.1    KQ458842    KPJ04897.1    KZ150004    PZC75262.1    SOQ50033.1    KZ150067    PZC74120.1    CH477213    EAT47626.1    PZC75260.1    ATLV01010625    KE524589    KFB35580.1    BABH01025724   

Proteomes

UP000005204    UP000007151    UP000283053    UP000053240    UP000053268    UP000218220    + More
UP000037510    UP000075900    UP000075883    UP000069940    UP000249989    UP000008820    UP000030765    UP000076408    UP000075920   

PRIDE

H9J4S0    E0X905    H9J4T7    H9J4U8    H9J4R7    D0PWZ5    + More
H9J4S1    H9J4X7    H9J4R6    H9J4X0    H9J4X1    H9J525    H9J4X6    H9J539    H9J4W9    E0X906    H9J4X2   

Pfam

PF00083   Sugar_tr

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR003663   Sugar/inositol_transpt       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9J4S0   E0X905   H9J4T7   H9J4U8   H9J4R7   D0PWZ5   + More
A0A212F161   A0A3S2P2D1   A0A0N1IHN6   A0A2H1WVP2   A0A212FJ74   A0A194QPY2   A0A194QJ23   A0A2W1BG84   A0A2A4KAY2   H9J4S1   A0A0N1IPS2   H9J4X7   H9J4R6   A0A023PNK9   H9J4X0   A0A3S2NWF9   A0A2A4JTG8   A0A0L7L8D8   A0A194QHU0   A0A2A4JT91   A0A2A4JUU3   A0A194QJI7   H9J4X1   A0A2W1BD78   A0A2H1W936   A0A2A4KA42   A0A2H1WAU6   A0A2H1WFL6   A0A2W1B9E8   A0A0N1I9K7   A0A2H1V0I3   A0A3S2LUZ6   A0A2A4J748   A0A0L7LQ31   H9J525   A0A2A4JU29   A0A194QKX0   A0A2W1BFI0   A0A212F9B1   A0A2H1WB04   A0A194QJ40   A0A2A4JSU4   A0A0L7L8F3   A0A194QJ47   A0A0L7KZR3   A0A212FCC0   H9J4X6   A0A2W1BBH7   A0A2H1W9B8   A0A0N1IG19   A0A212F9C9   A0A2A4JNG3   A0A194QJ80   A0A0N1IIX6   H9J539   H9J4W9   A0A194QJJ6   A0A3S2LEF2   A0A194QJ30   A0A0N0PE20   A0A0L7LRT2   A0A2A4KB29   A0A2A4J655   A0A2H1WK46   A0A2H1X0D6   A0A2W1BJW9   A0A2H1WX63   A0A336MJD0   A0A2W1BF54   A0A336M7L2   A0A2A4JBS9   A0A0L7KZ73   A0A0N0PEP7   A0A2A4JKJ9   A0A0N0PEE0   A0A182RRX2   E0X906   A0A182MLS9   A0A336MDU0   A0A182GCQ0   A0A182GTB3   A0A0N0PAH4   A0A2W1BJK8   A0A2H1WAF2   A0A2W1BN20   Q17LS5   A0A2W1BR72   A0A084VC86   H9J4X2   A0A182Y162   A0A182WKH8  

PDB

4ZWC     E-value=1.51546e-09,     Score=151

KEGG

101744985    K08145 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member

GO

GO:0022857   GO:0016021   GO:0008643   GO:0022891   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259   GO:0055085  

Length:

480

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

217.69627

Exp number, first 60 AAs:

26.54131

Total prob of N-in:

0.99842

POSSIBLE N-term signal

sequence

inside

1  -  19

TMhelix

20  -  42

outside

43  -  56

TMhelix

57  -  79

inside

80  -  83

TMhelix

84  -  106

outside

107  -  139

TMhelix

140  -  162

inside

163  -  168

TMhelix

169  -  186

outside

187  -  260

TMhelix

261  -  283

inside

284  -  329

TMhelix

330  -  352

outside

353  -  366

TMhelix

367  -  389

inside

390  -  401

TMhelix

402  -  424

outside

425  -  428

TMhelix

429  -  451

inside

452  -  480

 

 

Pi

69.049928

Theta

71.942944

Tajima's D

-1.240835

CLR

103.923462

CSRT

0.0976951152442378

Interpretation

Uncertain