SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16118
Pre Gene Modal
BGIBMGA004509
Annotation
PREDICTED:_monosaccharide-sensing_protein_3-like_isoform_X1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.699
 

Sequence

CDS
ATGATGTCGTATGGCATGTGTATCGGGTTTAACGCATCACTCTTCTCAGAACTGAAGAAGACCGGAGAGATACCCCTGGACAGGGATTCAGAATCTTGGTTGGCATCACTCATTGGAATAACAACGCTTATTGGAGCGCTACTCACATCATTTATCATAGACAGCATCGGCCGAAGACCAGCAGTTATTACCAGCTCGGTCCTCATGGTCAGCGGGTGGATCTCATTTAGCTTAGCTTCATCACTTTCTATTTTATTGGTAGCGAAAATTTTTCAAGGAATGTCCATTGGTCTTGGCACAACAATGGGAGGAGTTTTGATTGCAGAATACAGCAGTCCGAAATACAGAGGGTCTTTCACGGCCACAATCCAAACTGCTATGCTATCAGGGAGTCTAATTGCTCATTCGTTTGGATTGTTTTACAACTGGCATCAAATTTCAACAATACTAGTGTTTTTCGCTCTACTTGGATTGTTGATAGCTGTTTTTTCACCTGAATCCCCAAGTTTCTTGGCAACTAAAGGACGTTATGATGATTGCAGAAAAGTTTTTCGCTGGTTAAGAGGTCCAAATGAAGAAGATGAACTCGAAAATATGATTAACACTGATATGGTAGTTAAAGAAACTAAAAAGGGTCGTCGAAAAAAGACTACGTCTAAAATAATACAAAAAAAATTGACGTACGTTATCACTTCATTCAAAAAGCGAGAATTTCACATTCCAGTATTTATAGTTATTCACCTAAATGCTGTAAATCAATTCTGTGGTTCTCTCATCCACGATATATATGCATTTGACATCCACAAAGCTTTATATGGTACCGATATCTACATGTTTAAAGTGATTGCATCTCTGGACATCCAAAGAATTTTATCAACAGTTCTAACGGTTTACTTAACGAGTAGAGTACGGAGGCGTCCATTATTATTCACATTAGTTGGATTGAATATATTGGCGTATATCTGTGAGGCGGGATACATATACGCCAGACGTCATAGTATACTTCCCTTTGACCACATGGCTATAGGAGTATTTCTACATCATTTCCATTATTTCACCAACGGAGCTGGCTCCATGTCCTTGCCAACTATAATTAGTTGCGAATTATTTCCAACAGCAGACAAAGGATTCTGTGGACTGATTTGTAGTATGGTATTCTCAATGTTCATGTTTGCGAATATCAAAAGTGCACCGTATTTATTCGCCCTCGTGGGTGTAGAAGGAACATTTTGTGCTTACGCTCTCTTACTACTTTACTGTCAGGTAATGTTGTTTTATATATTGCCAGAAACTAAAGATAAGACCCTCCAAGAAATCGAAGATAAAATTAGAGGATTTTCTTTTGCTGATCGTGTTGAAACTTTGAAAACAGAGGAAGATGAGCTTTTGAGTTGA
Protein
MMSYGMCIGFNASLFSELKKTGEIPLDRDSESWLASLIGITTLIGALLTSFIIDSIGRRPAVITSSVLMVSGWISFSLASSLSILLVAKIFQGMSIGLGTTMGGVLIAEYSSPKYRGSFTATIQTAMLSGSLIAHSFGLFYNWHQISTILVFFALLGLLIAVFSPESPSFLATKGRYDDCRKVFRWLRGPNEEDELENMINTDMVVKETKKGRRKKTTSKIIQKKLTYVITSFKKREFHIPVFIVIHLNAVNQFCGSLIHDIYAFDIHKALYGTDIYMFKVIASLDIQRILSTVLTVYLTSRVRRRPLLFTLVGLNILAYICEAGYIYARRHSILPFDHMAIGVFLHHFHYFTNGAGSMSLPTIISCELFPTADKGFCGLICSMVFSMFMFANIKSAPYLFALVGVEGTFCAYALLLLYCQVMLFYILPETKDKTLQEIEDKIRGFSFADRVETLKTEEDELLS

Summary

Similarity
Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
EMBL
BABH01035543    GQ871755    ADM86146.1    BABH01035538    BABH01035539    BABH01035469    + More
BABH01035544    FJ373021    ACQ66002.1    KQ460077    KPJ17887.1    KQ458671    KPJ05561.1    AGBW02008317    OWR53759.1    AGBW02010956    OWR47467.1    RSAL01000045    RVE50592.1    ODYU01011356    SOQ57052.1    KZ150249    PZC71836.1    KPJ05558.1    BABH01035548    NWSH01000008    PCG80953.1    BABH01025733    BABH01035527    BABH01035528    BABH01035529    KQ458981    KPJ04505.1    KPJ17881.1    RVE50589.1    BABH01025717    JTDY01002352    KOB71610.1    KJ439227    KZ150491    AHX25878.1    PZC70688.1    NWSH01000704    PCG74682.1    KPJ17880.1    KPJ05554.1    JTDY01000342    KOB77618.1    PZC71835.1    NWSH01000578    PCG75536.1    ODYU01007122    SOQ49615.1    PCG74683.1    KPJ05583.1    KPJ05555.1    PCG80949.1    BABH01025731    RSAL01000181    RVE44925.1    ODYU01008354    SOQ51875.1    BABH01038881    PCG75537.1    KPJ17884.1    ODYU01000118    SOQ34347.1    PZC71838.1    AGBW02009614    OWR50324.1    NWSH01002771    PCG67556.1    KZ150133    PZC73021.1    AGBW02009205    OWR51384.1    KOB71609.1    SOQ49614.1    JTDY01004123    KOB68566.1    ODYU01007347    SOQ50032.1    BABH01025720    KPJ05573.1    SOQ49613.1    PCG74684.1    OWR50323.1    PZC70687.1    KPJ05559.1    KPJ05572.1    NWSH01001042    PCG72950.1    RVE44926.1    KQ460126    KPJ17588.1    BABH01038877    BABH01038878    BABH01038879    BABH01038880    KPJ17891.1    KQ458842    KPJ04897.1    KQ459890    KPJ19577.1    KPJ19576.1    KPJ05563.1    GQ871756    ADM86147.1    JTDY01000230    KOB78170.1    AXCM01002831    BABH01025723    AGBW02013662    OWR43027.1    PCG67555.1    SOQ50033.1    BABH01025724    PZC73020.1    ADMH02001735    ETN61249.1    ODYU01012470    SOQ58795.1    KOB68563.1    KQ459299    KPJ01871.1    JXUM01086634    KQ563580    KXJ73638.1    JXUM01009472    KQ560284    KXJ83288.1    DS231843    EDS35465.1    KQ460761    KPJ12541.1    CH477213    EAT47626.1    KPJ05560.1    PZC70686.1    NWSH01006268    PCG63546.1    ODYU01009373    SOQ53753.1    KQ971345    KYB27009.1    UFQT01000224    SSX22028.1   
Pfam
PF00083   Sugar_tr
Interpro
IPR020846   MFS_dom        + More
IPR036259   MFS_trans_sf       
IPR005828   MFS_sugar_transport-like       
IPR005829   Sugar_transporter_CS       
IPR003663   Sugar/inositol_transpt       
SUPFAM
SSF103473   SSF103473       
PDB
4YB9     E-value=5.37064e-10,     Score=155

Ontologies

Topology

Length:
464
Number of predicted TMHs:
9
Exp number of AAs in TMHs:
191.19931
Exp number, first 60 AAs:
21.57469
Total prob of N-in:
0.17170
POSSIBLE N-term signal
sequence
outside
1  -  33
TMhelix
34  -  53
inside
54  -  65
TMhelix
66  -  88
outside
89  -  92
TMhelix
93  -  110
inside
111  -  116
TMhelix
117  -  139
outside
140  -  148
TMhelix
149  -  171
inside
172  -  306
TMhelix
307  -  329
outside
330  -  348
TMhelix
349  -  371
inside
372  -  375
TMhelix
376  -  394
outside
395  -  408
TMhelix
409  -  428
inside
429  -  464
 
 

Population Genetic Test Statistics

Pi
178.106683
Theta
149.877653
Tajima's D
1.261397
CLR
0.059398
CSRT
0.729963501824909
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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