Gene

KWMTBOMO16114

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr27(+):9488646-9491981      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.928

CDS

ATGCCTCGTCGCAGACAATGGATGACGCCATTTATAAAACAGTGTTTCGTCACATCAGGTGTGACACTCAATATGTTGACACACGGCTTCATGTACGGATTCAATACGGGACTGTTCGCACAGTTGAGGAAGACTAAAGAAATACAGTTGGATTTGGAGTTAGAGTCTTGGCTGGCGTCGTCAACCAGCTTATCATTCATCGTTGGATCGCTATTCAGTTCAATATTCATGGATCGGTTCGGCAGGAGACCTGCATTCATAATTGCATCGGCCACCATGATAATCAGCTGGTTAATATTCATTGCAGCTAAATCCTTCACCGCTTTATTAGTTGCCAAAATATTTCAAGGCTTCTCTGCAGCGGCTGGATCTGTTTCATTACCAAATATTGTGGCCGGAGAAATATTCCCTTTGGCAAATAGAAGCGCTTGTGGAATGATTTGTAACATAACATTTTCATTATACATGTTCGTTAATATCAAAAACGTTCCTTATATCTTTTCTGGGGCTGGGGTCAGCGGTGTTTTTTTTATGAACGCCGCCCTGCTTTCATATGCCCTCGGCATGACAATGTACACGTTACCGGAAACAAAAGATAAAACGCTCTTAGAAATAGAACACATATTAAGAGGATGTCCTATTGCTGATGATGATGAGACAATGATTAATCTGAAAGAACATAATGAGACAAATTTCTAA

Protein

MPRRRQWMTPFIKQCFVTSGVTLNMLTHGFMYGFNTGLFAQLRKTKEIQLDLELESWLASSTSLSFIVGSLFSSIFMDRFGRRPAFIIASATMIISWLIFIAAKSFTALLVAKIFQGFSAAAGSVSLPNIVAGEIFPLANRSACGMICNITFSLYMFVNIKNVPYIFSGAGVSGVFFMNAALLSYALGMTMYTLPETKDKTLLEIEHILRGCPIADDDETMINLKEHNETNF

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9J4R9   H9J4S0   A0A2A4JT91   H9J4X7   A0A2A4JTG8   A0A023PNK9   + More
A0A2H1W936   A0A2W1BBH7   A0A2W1BD78   A0A2A4JUU3   A0A0N1IPS2   A0A2A4JKJ9   H9J017   A0A0N1IPZ0   A0A0N1IDG3   A0A2H1WKZ9   A0A194QKX0   A0A0N0PEE0   A0A0N0PEP7   A0A1S4FT49   A0A0N0PAH4   A0A2A4JJR5   A0A2H1W9B8   A0A0D6MUP8   J9KWZ6   A0A2S3W2F7   A0A2V4R238   A0A2H8TN79   D5QII2   A0A143WL99   A0A318Q7D5   A0A0L7LRT2   A0A336MDU0   A0A336LS95   B4KG70  

Pubmed

19121390    24730650    28756777    26354079    17510324    20543071    + More
26227816    17994087   

EMBL

BABH01035541    BABH01035538    BABH01035539    NWSH01000704    PCG74683.1    BABH01025717    + More
PCG74682.1    KJ439227    KZ150491    AHX25878.1    PZC70688.1    ODYU01007122    SOQ49615.1    PZC70687.1    KZ150249    PZC71835.1    NWSH01000578    PCG75536.1    KQ460077    KPJ17881.1    NWSH01001160    PCG72306.1    BABH01018801    KQ460126    KPJ17589.1    KQ459158    KPJ03590.1    ODYU01009373    SOQ53753.1    KQ458671    KPJ05555.1    KQ459890    KPJ19576.1    KPJ19577.1    KQ458842    KPJ04897.1    PCG72307.1    SOQ49613.1    BAMU01000017    GAN57452.1    ABLF02025479    ABLF02025480    POTC01000012    POF63050.1    NKUB01000002    PYD70956.1    GFXV01003635    MBW15440.1    ADTV01000060    EFG83150.1    FBVP01000001    CUW48336.1    NKUD01000004    PYD73328.1    JTDY01000230    KOB78170.1    UFQT01001016    SSX28504.1    UFQS01000083    UFQT01000083    SSW99067.1    SSX19449.1    CH933807    EDW11057.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000032677    UP000007819    + More
UP000237344    UP000247371    UP000006468    UP000075237    UP000248218    UP000037510    UP000009192   

PRIDE

H9J4R9    H9J4S0    H9J4X7    H9J017   

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR003663   Sugar/inositol_transpt       
IPR011701   MFS       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9J4R9   H9J4S0   A0A2A4JT91   H9J4X7   A0A2A4JTG8   A0A023PNK9   + More
A0A2H1W936   A0A2W1BBH7   A0A2W1BD78   A0A2A4JUU3   A0A0N1IPS2   A0A2A4JKJ9   H9J017   A0A0N1IPZ0   A0A0N1IDG3   A0A2H1WKZ9   A0A194QKX0   A0A0N0PEE0   A0A0N0PEP7   A0A1S4FT49   A0A0N0PAH4   A0A2A4JJR5   A0A2H1W9B8   A0A0D6MUP8   J9KWZ6   A0A2S3W2F7   A0A2V4R238   A0A2H8TN79   D5QII2   A0A143WL99   A0A318Q7D5   A0A0L7LRT2   A0A336MDU0   A0A336LS95   B4KG70  

PDB

4LDS     E-value=0.000608201,     Score=99

KEGG

101736616    no KO assigned | (RefSeq) monosaccharide-sensing protein 1-like

GO

GO:0022857   GO:0016021   GO:0008643   GO:0055085   GO:0005215   GO:0022891   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259  

Length:

232

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

107.45045

Exp number, first 60 AAs:

26.57953

Total prob of N-in:

0.98911

POSSIBLE N-term signal

sequence

inside

1  -  19

TMhelix

20  -  42

outside

43  -  56

TMhelix

57  -  76

inside

77  -  87

TMhelix

88  -  110

outside

111  -  164

TMhelix

165  -  187

inside

188  -  232

 

 

Pi

178.683179

Theta

183.223457

Tajima's D

-0.34069

CLR

344.67027

CSRT

0.27863606819659

Interpretation

Uncertain