SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16109
Pre Gene Modal
BGIBMGA004621
Annotation
PREDICTED:_nose_resistant_to_fluoxetine_protein_6-like_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.953
 

Sequence

CDS
ATGCCACCTCTCTTCGATTTGGACGAATATGAATTTTGTTTAAATGGGGATAGAGGTATTTATTGCTTGGTCCGGATGGATCTAGTTGGACCTGACGACAGTGATTTGATTCAACTTATAAGGGACTACTCAGCGGTTACGACAAAACATTACAACCACAGTTATTTGGAGAGAGGCATCTGTGTTACTAGAACGTGCAGGAAATACTTCGAATACGAACAAAACGTTTCAGACTTCGACGCAAATCTGGAGGCTTGTCTTAACGAAACTATCTACAAAGATTACGAACTGAAAATTAATTTAACCAAAATCTATTATTGCAAGAAACACGAAGACGGCATTCAAATTGACTCGTACGATTGGATTGTGTTTGGAATATTTGGATTCTTTGTCGCCATCAATGCGATCGGAACTGTGTACCATCAGTTTGTGTATAGGCGTGAAGAAGAAAAGAACATTGGTAACAAATACCTTCTATGTTTTTCAATCAAACGTAACTGGGGTTGGTTGATTCAGTCTGAACCAAAAGATCCTAGGATAAGGAGACTCAAAGGCTTTTATGGTGTCAGAACAATAACGAATGTTTTAATAATATTCGCCCACATCATCACTATATTGGGAAACGGGTTCGTTGCAAATCCGCGCGACTTCGAAGAGGCATACGATCATTTGCTCTACCAGATGATCTTCAACGGTGTTATGGTGGTTCACGTCTTCTTCTGCATATCAGGCTTCCTACTGGTATACAACTTCTTAATCCGCGTCGAGAAACTACCGGCAACTTGGGCATCTATACCATTTGTCATGTTCCTGAGGTGGTGGAGGTTGACGCCGGTTTACGCATTAATCATAGCGTTCAATTCAACTTGGATGCGGCATTTAAGCTCCGGCCCGCTTTGGGACCACTACGTGACCAACAGCTTCGTGAGAGATTGCCGAAGATATTGGTGGCAGCATCTAATCTACATCAACAACTATATGACGGAAAATAAGTTCTGCGCATTGCACACTTGGCACGTAGCATCAGACACACAGCTTTTCTTTATTGGACTGGTTGCTTATGTGCTAACGATGAAACGAGGAAGGAAGATCGTGATGATCTTGCTTCTGATCACATCTCTCATACTACCGTCCCTGCACGTCTGGTTCCAGGATTTGGATGGCATTATGATCTTGATGCCAGAGTTTTTCAGAACTTTAAACAACGATAGCTTTTATTTGATGTGTAAATTGGGACATAACAATTTGGTCAGCTATACGGTCGGAATGGCCAGTGGGAATCTGGTCTATAACTGGCAGAAGAGAGGTGTGGATATTTCAAAAAATAAGGTATTTGCTAAGTTCCTATGGTTAGTGATTCCGGCCATCGCATTAATTATGTACTCCGGGCAGATGTTCTACATTGAGGGTCCAAGAGCCTCTGTGTTCTTGCGAATGGCATATGCGTCTTTGCACCGATTAATTATCGCAGTAATCATTGCTGGTGGATTAATTGGAATGGTCATGAAGAGCCCCATTATATTAAGAAACATCCTGGAGTGGAAGGGATGGGTTTTGCCCGGCAGACTGACCTACTGCGTGTATTTGATTCATTTCAACTTTATCCATATAATTTCTGGAATTAAGATCACCTTGAATCAAGCCGCGATGTTTAATATGTTCATCACCACTGCAGGCGTCACCTGTCTATCCTACATCCTTGCTTTACTGCTATTCCTGCTAGTGGAAGGACCACTGAACAACTTAATGAAGACTTGGACTGATTCTGTGAAGAAAGAATGA
Protein
MPPLFDLDEYEFCLNGDRGIYCLVRMDLVGPDDSDLIQLIRDYSAVTTKHYNHSYLERGICVTRTCRKYFEYEQNVSDFDANLEACLNETIYKDYELKINLTKIYYCKKHEDGIQIDSYDWIVFGIFGFFVAINAIGTVYHQFVYRREEEKNIGNKYLLCFSIKRNWGWLIQSEPKDPRIRRLKGFYGVRTITNVLIIFAHIITILGNGFVANPRDFEEAYDHLLYQMIFNGVMVVHVFFCISGFLLVYNFLIRVEKLPATWASIPFVMFLRWWRLTPVYALIIAFNSTWMRHLSSGPLWDHYVTNSFVRDCRRYWWQHLIYINNYMTENKFCALHTWHVASDTQLFFIGLVAYVLTMKRGRKIVMILLLITSLILPSLHVWFQDLDGIMILMPEFFRTLNNDSFYLMCKLGHNNLVSYTVGMASGNLVYNWQKRGVDISKNKVFAKFLWLVIPAIALIMYSGQMFYIEGPRASVFLRMAYASLHRLIIAVIIAGGLIGMVMKSPIILRNILEWKGWVLPGRLTYCVYLIHFNFIHIISGIKITLNQAAMFNMFITTAGVTCLSYILALLLFLLVEGPLNNLMKTWTDSVKKE

Summary

Catalytic Activity
S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.
EMBL
BABH01038834    KQ461184    KPJ07525.1    KPJ07535.1    KQ459449    KPJ00884.1    + More
ODYU01007420    SOQ50170.1    AGBW02012502    OWR44975.1    NWSH01001667    PCG70472.1    KQ459053    KPJ04119.1    RSAL01000205    RVE44373.1    SOQ50171.1    KPJ00879.1    KZ150085    PZC73777.1    NWSH01001633    PCG70632.1    KZ150068    PZC74095.1    KPJ07529.1    PZC74094.1    KPJ04116.1    SOQ50173.1    KQ461073    KPJ09500.1    AGBW02015045    OWR40663.1    KPJ04118.1    PCG70631.1    JTDY01004025    KOB68696.1    JX846987    AGG55004.1    ODYU01007576    SOQ50462.1    KPJ04127.1    AGBW02008687    OWR52781.1    SOQ50174.1    KPJ09497.1    GEZM01074205    GEZM01074204    JAV64641.1    KPJ00868.1    GEZM01042633    JAV79751.1    KQ460635    KPJ13420.1    AAAB01008807    EDO64706.1    AXCM01001275    EAU77672.2    EDO64708.1    NWSH01000045    PCG80257.1    EDO64709.1    EDO64707.1    AXCN02000449    AXCN02000448    DS232017    EDS31995.1    KZ149997    PZC75396.1    APCN01000148    APCN01000149    APCN01000146    ATLV01023202    ATLV01023203    ATLV01023204    KE525341    KFB48579.1    EAA04081.4    PCG70475.1    CH478064    EAT34133.1    GEZM01096350    JAV54960.1    CH902619    EDV36810.2    KQ459900    KPJ19352.1    AXCM01001276    AXCM01001277    CH478446    EAT32978.1    DS231911    EDS45872.1    EAA03947.5    GEHC01001406    JAV46239.1    APCN01000152    CH940662    EDW58809.2    GEZM01096331    JAV54981.1    CH478459    EAT32956.1    JXUM01082219    JXUM01082220    JXUM01082221    JXUM01082222    JXUM01082223    JXUM01082224    JXUM01082225    KQ563298    KXJ74104.1    DS233388    EDS29732.1   
Pfam
PF01757   Acyl_transf_3        + More
PF02958   EcKinase
PF04488   Gly_transf_sug
PF00632   HECT
PF00397   WW
PF00168   C2
Interpro
IPR002656   Acyl_transf_3        + More
IPR004119   EcKinase-like       
IPR011009   Kinase-like_dom_sf       
IPR015897   CHK_kinase-like       
IPR007577   GlycoTrfase_DXD_sugar-bd_CS       
IPR000569   HECT_dom       
IPR035983   Hect_E3_ubiquitin_ligase       
IPR035892   C2_domain_sf       
IPR036020   WW_dom_sf       
IPR001202   WW_dom       
IPR000008   C2_dom       
SUPFAM
SSF56112   SSF56112        + More
SSF56204   SSF56204       
SSF51045   SSF51045       
Gene 3D

Ontologies

Topology

Length:
593
Number of predicted TMHs:
11
Exp number of AAs in TMHs:
237.23346
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.00021
outside
1  -  121
TMhelix
122  -  144
inside
145  -  185
TMhelix
186  -  208
outside
209  -  227
TMhelix
228  -  250
inside
251  -  270
TMhelix
271  -  293
outside
294  -  334
TMhelix
335  -  357
inside
358  -  363
TMhelix
364  -  383
outside
384  -  414
TMhelix
415  -  432
inside
433  -  444
TMhelix
445  -  467
outside
468  -  486
TMhelix
487  -  509
inside
510  -  515
TMhelix
516  -  538
outside
539  -  552
TMhelix
553  -  575
inside
576  -  593
 
 

Population Genetic Test Statistics

Pi
276.296098
Theta
153.722195
Tajima's D
2.427864
CLR
0.005718
CSRT
0.937453127343633
Interpretation
Uncertain
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