Gene

KWMTBOMO16108

Annotation

blastopia_polyprotein_[Lasius_niger]

Location

Bomo_Chr27(+):9292376-9296412      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.001

CDS

ATGCCTCGGAAGGGTGCTAAAGAAGACGAAGAATGCTTTGCTGAACCTGCTCCACAAATTTCCTTCTGCGAATTAGAAAAATCTATGACTGCATTTTCTGGTGACGATGCATACGGCGTGGATACCTTTATAAAGGATTTTGAAGATATCGCTAATCTCATGCAATGGACGGGCATTGAAAAACTGATCTACGCAAAAAGGCTTTTGAAGGGGACAGCAAAATTGTTCCTGAGATCTTTGACTGGTACGACTACATGGGAACTCTTGAAAACGGGATTAAAAGAGGAATTTGGACTACATCTGAACAGCGCAGCCATTCACAAGACCATATCAAATAGGAAGATGAAACCAGGTGAAACCTACCAACAATATTTTTTGCAACTCAAAGAACTAGCAGTACTCGGAAATATTGAAGATGACGCCCTAATGGAATACATCATTGATGGCATCCCTGACAATGAAATGAATAAAACTATTCTATATGGAGCTTCCAACATCAAAGAATTTAGGAAAAAACTTGATTTATATGCTGAAATAAAGAAGAAATGTCGAACGTCAAACAAAGCTTATAATCAATCAACAACATCCAAGCCTACAACATCTGGATGGAAGAAACCATTACCTAAGAAGAGATGTTTCAACTGCGGAGACCTAGATCATGAATCTTCAGGCTGCTCTAAAGGAATAAAGTGCTTCCGTTGTAATGACTTTGGTCATAAGTCAACTGACTGTCCCAAAAATATAAAGAAGACTCTAGAAATAAAATGTAACAAGGAGAATGATAGCCAAGCACCCTACAAAGAAGTTTTGATCAATAATGTTATGGTAAAATCACTTATTGACACTGGCAGTGATGTGAACCTAATGAATGAATCTACATTTACTCAAATACAAGGCGACACTTGTAACTACCACCCTGATTTAGTACAAAGCCTGACAGGCATTGGTGACTGTGAGGTACATACAAGAGGCTCATGTACTCCAAGAATTGAGATTGATGGTTGCCAATGTGAAGCAACGTTCTATATCATCGAAGATGACAAAATACCAGTTGATGTAATAATAGGGAACCCAATATTACAGGACATAGAACTCAGTTTTAAGTCTGGTGTTATTTCTGCTAAAAGAATTTTACAAGTCACAATGTTAGAGGATCAGGCTGAGGAACCAATGATTATAGGAAATTTCAAATATAAAGATCAGATTGAGAAAATACTGACAGAATATGACCCTGGAAAATGTTCTAAAGAATCCAGAGTTGAATTAAAGTTATTACTTACTGATGAAACCCCAGTGTACCAGAATCCACGACGCCTATCCCCTTTAGAACTAGAAATTGTAGATAAACAAATTAAGGAATGGCTAAAGGATGGTATAATTAAACCAAGTAATTCAGACTTTGCAAGTCCAATAGTACTGGCAAAAAAGAAGAATAAAGGATATCGACTGTGTGTCGACTATCGAAAACTAAACAAAAAGATAATCAAAGAAAGATTTCCTCTTCCACTCATAGAAGACCAGATAGACAGGTTGAAAGACGCTACAATGTTTACAACATTGGACCTGAAAAATGGATTTTTTCATGTTAATGTTTGCAAGGACAGCCAGAAGTATACATCGTTTGTGACTCCTCGTGCCCAATTCGAATTTCAAAAAATGCCTTTTGGTCTCTCCGTTGGACCCTCTGTGTTCCAGAGATTTGTTAATGATGTGTTTCAGGACCTGATCTTGGATGGTGTGGTGTTGACCTATTTAGATGATTTGATCCTGCCATTTAAACTTCCTAAAGAAGGTATTGAGAAGTTACAAAAAGTTTTATACAGAGCTGAAGAATATGGACTAACTTTCAACTGGAGTAAATGTCAATTTATGCAGAAGAAAATTAACTATTTGGGTTATATCATTGAGGATGGTAAAATCAGTCCATCAAAAGAGAAAGTGACTGCTGTTGCTCGTTTTCCAACCCCACACAATATTAAGACTTTACAATCATTTCTTGGACTTACAGGATATTTCAGAAAATTTATCAAAAATTATTCTCTTATAGCAAGACCGTTAACCAACCTTTTGAAAAAAGGTGTTGTTTTCAATTACGACGAAGAATGTGAGAAGGCAGTTGAGACCCTCAGAACTATTCTGTGTCAATCACCAGTTTTGCAGATCTACAATCAAGACTTAGAAACCGAACTCCACACTGATGCAAGTGCTGACGGCTATGGAGCTGTATTATTACAAAGAAACCTGAAAGATAATAAGATGCATCCAGTTTACTACATGAGTAGGAAGACTTCACCTGCAGAAAAGAAGTATCATAGTTACTATTTAGAAGTTTTAGCTGTTGTTGAAGCTATCAAGAAATTCAGAGTTTACCTGCTTGGAATCCATTTCAAAGTCATCACTGACTGCTCTGCTCTGACAACAACTCTAAAGAAAAAAGACTTACCTCCAAGAGTAGCACGCTGGGCTCTGTTGCTTGAAGAATATAATTACACTATTGAACATAGACCTGGAATAAGAATGAAGCATGCTGACGCTCTCAGTAGACAACCTGTAGAAAACATCTTTATACTTACCGACACAACCGCCCGCCTCCGTAGAGCACAAGATGATGACCTAAAAATAAAACTGATTAAAAAGGTCTTAGAAAAAGAACATTATGATGACTTTATGATTGAAGCTGGAATATTATGGAAAATAAAAGATGGAAAAAAATTAATGGTGGTACCTAAGAAAATGCAAAATGAAATTATTAGAAAAAATCATGACAAGGGACATTTTGGATTAATTAAAACAGAAGAATTGATTTCCAGAAACTATTACTTTGAAAACATGAAAGATAAGATCAAATCAGTATTAGAAAACTGCATAGAGTGTATTTTAATTTCACATAAAAAGGGAAAATCCGAAGGTTTTCTGCATGCCATAGACAAAGGAGACATACCACTATCTACTTACCATATTGACCATTTGGGACCGTTGACATCAACAAATAAGAATTACAAGTATATACTCACAGTTGTAGATGGGTTCACAAAATTTACATGGATTTACCCAACAAAGACTTTGTCCACTGATGAAGTTATTGACAAACTGAAGATTCAACAACAGACTTTTGGTTCACCACAGAGGATTATTAGTGACAGAAGTACCTCCTTTACATCCAACACTTTTAAAGAATTTTGTGAAACTGAAGGAATCTTACATCACATTATTACTACTGGCCAACCTAGAGGTAATGGTCAGGTTGAGAGAGTCCATCAGATAATAATTGATGCTCTAAGTAAATTATCAGCAGATGATCCCACTAAGTGGTACAAACACATCAGTAATATCCAGAGATGCTTAAATGGTTCATTTCAAAGAAGCATTAAGATGTCACCCTTTGAATTACTGACAGGAGTCAAAATTAATAATAAAAATGAAGCTATCTACAATTTAATTAAGGAAGAGAATCTTAAATTTTTCTGTGATGAAAGAGAAGACTTGAGGAAGAAAGCAAGGGAGAACATACAAAAAATTCAAGATGAGAATAGAAGAAATTTTAACCGAAGACGAAGGAAACCCAGAGAATATGAAGTAGGAAATCTTGTTGCTATCAAGAGGACACAATTTGTGCAAGGCTACAAACTGCATCCAAGATACTTAGGACCTTATGAAGTCGTGAAAAAGAAGAGGAACGACCGTTATGATCTCCAGAGGATTGGTCAAGGTGAAGGACCCCATCACACCAGTAGCTCCGTGGATATGATGAAACCTTGGGTCGCTGATGCTGTCGAGTATGAGTCATCTGGGACAGACGACTGA

Protein

MPRKGAKEDEECFAEPAPQISFCELEKSMTAFSGDDAYGVDTFIKDFEDIANLMQWTGIEKLIYAKRLLKGTAKLFLRSLTGTTTWELLKTGLKEEFGLHLNSAAIHKTISNRKMKPGETYQQYFLQLKELAVLGNIEDDALMEYIIDGIPDNEMNKTILYGASNIKEFRKKLDLYAEIKKKCRTSNKAYNQSTTSKPTTSGWKKPLPKKRCFNCGDLDHESSGCSKGIKCFRCNDFGHKSTDCPKNIKKTLEIKCNKENDSQAPYKEVLINNVMVKSLIDTGSDVNLMNESTFTQIQGDTCNYHPDLVQSLTGIGDCEVHTRGSCTPRIEIDGCQCEATFYIIEDDKIPVDVIIGNPILQDIELSFKSGVISAKRILQVTMLEDQAEEPMIIGNFKYKDQIEKILTEYDPGKCSKESRVELKLLLTDETPVYQNPRRLSPLELEIVDKQIKEWLKDGIIKPSNSDFASPIVLAKKKNKGYRLCVDYRKLNKKIIKERFPLPLIEDQIDRLKDATMFTTLDLKNGFFHVNVCKDSQKYTSFVTPRAQFEFQKMPFGLSVGPSVFQRFVNDVFQDLILDGVVLTYLDDLILPFKLPKEGIEKLQKVLYRAEEYGLTFNWSKCQFMQKKINYLGYIIEDGKISPSKEKVTAVARFPTPHNIKTLQSFLGLTGYFRKFIKNYSLIARPLTNLLKKGVVFNYDEECEKAVETLRTILCQSPVLQIYNQDLETELHTDASADGYGAVLLQRNLKDNKMHPVYYMSRKTSPAEKKYHSYYLEVLAVVEAIKKFRVYLLGIHFKVITDCSALTTTLKKKDLPPRVARWALLLEEYNYTIEHRPGIRMKHADALSRQPVENIFILTDTTARLRRAQDDDLKIKLIKKVLEKEHYDDFMIEAGILWKIKDGKKLMVVPKKMQNEIIRKNHDKGHFGLIKTEELISRNYYFENMKDKIKSVLENCIECILISHKKGKSEGFLHAIDKGDIPLSTYHIDHLGPLTSTNKNYKYILTVVDGFTKFTWIYPTKTLSTDEVIDKLKIQQQTFGSPQRIISDRSTSFTSNTFKEFCETEGILHHIITTGQPRGNGQVERVHQIIIDALSKLSADDPTKWYKHISNIQRCLNGSFQRSIKMSPFELLTGVKINNKNEAIYNLIKEENLKFFCDEREDLRKKARENIQKIQDENRRNFNRRRRKPREYEVGNLVAIKRTQFVQGYKLHPRYLGPYEVVKKKRNDRYDLQRIGQGEGPHHTSSSVDMMKPWVADAVEYESSGTDD

Uniprot

A0A0J7K9X8   J9JZ77   A0A023EYH9   A0A023EZG2   A0A0A1XB16   A0A023EYF0   + More
A0A023EY26   A0A023F013   J9JQ65   A0A1W7R6L8   W8C8Q1   W8APB2   A0A0A1XFE9   W8B0V9   A0A0J7K890   A0A0J7KLK4   A0A0J7NF11   X1X261   A0A2M4AEU2   A0A034VAM6   A0A034VLR3   Q24262   A0A034VKV9   Q961S4   A0A2M4CKM2   A0A224XHR1   A0A2S2PFS2   A0A2H8TRV6   J9LBS9   X1XU22   A0A2S2NKJ2   X1WPP0   A0A2S2NFQ4   X1X5H2   A0A1Y1MFA9   X1XU14   J9JJ45   A0A1W7R6H1   A0A2S2PGQ9   A0A1W7R6G2   X1XD76   A0A0J7KEC9   A0A1W7R6G1   A0A0C9RXL6   T1PMR9   A0A2S2QVZ0   A0A2S2PD17   A0A139WIB9   A0A0J7KQI5   J9L2R5   B7S8P8   A0A0J7KJ08   A0A2S2R3T0   A0A146M2J2   A0A034WRX5   A0A0A9X1Z8   X1XU38   J9KKW9  

Pubmed

25474469    25830018    24495485    25348373    8055714    28004739    + More
18362917    19820115    26823975    25401762   

EMBL

LBMM01010976    KMQ87102.1    ABLF02014660    ABLF02042774    GBBI01004550    JAC14162.1    + More
GBBI01004551    JAC14161.1    GBXI01005773    JAD08519.1    GBBI01004549    JAC14163.1    GBBI01004477    JAC14235.1    GBBI01004613    JAC14099.1    ABLF02005846    GEHC01000930    JAV46715.1    GAMC01007326    JAB99229.1    GAMC01020207    JAB86348.1    GBXI01004632    JAD09660.1    GAMC01015907    JAB90648.1    LBMM01011782    KMQ86633.1    LBMM01005919    KMQ91096.1    KMQ91095.1    ABLF02005127    ABLF02005129    ABLF02007401    GGFK01005990    MBW39311.1    GAKP01019383    JAC39569.1    GAKP01016237    JAC42715.1    Z27119    CAA81643.1    GAKP01016235    JAC42717.1    AY050234    AAK84933.1    GGFL01001689    MBW65867.1    GFTR01008753    JAW07673.1    GGMR01015682    MBY28301.1    GFXV01005120    MBW16925.1    ABLF02041876    ABLF02017401    GGMR01005091    MBY17710.1    ABLF02033943    ABLF02042737    GGMR01003388    MBY16007.1    ABLF02004401    ABLF02013544    ABLF02013550    GEZM01033083    JAV84424.1    ABLF02003120    ABLF02004015    ABLF02057179    ABLF02066208    ABLF02008401    ABLF02008404    GEHC01000876    JAV46769.1    GGMR01016004    MBY28623.1    GEHC01000888    JAV46757.1    ABLF02022032    LBMM01008871    KMQ88569.1    GEHC01000891    JAV46754.1    GBYB01013920    JAG83687.1    KA649989    AFP64618.1    GGMS01012726    MBY81929.1    GGMR01014665    MBY27284.1    KQ971339    KYB27733.1    LBMM01004291    KMQ92598.1    ABLF02008946    EF710649    ACE75273.1    LBMM01006880    KMQ90234.1    GGMS01015422    MBY84625.1    GDHC01004980    JAQ13649.1    GAKP01001563    JAC57389.1    GBHO01030786    JAG12818.1    ABLF02024793    ABLF02013955   

Proteomes

UP000036403    UP000007819    UP000007266   

PRIDE

Q24262    Q961S4   

Pfam

PF17919   RT_RNaseH_2        + More
PF17921   Integrase_H2C2
PF00665   rve
PF00078   RVT_1
PF00098   zf-CCHC
PF02037   SAP
PF17917   RT_RNaseH
PF09668   Asp_protease
PF03732   Retrotrans_gag
PF00077   RVP
PF12384   Peptidase_A2B
PF16064   DUF4806
PF13873   Myb_DNA-bind_5

Interpro

IPR001878   Znf_CCHC        + More
IPR012337   RNaseH-like_sf       
IPR036875   Znf_CCHC_sf       
IPR036361   SAP_dom_sf       
IPR001969   Aspartic_peptidase_AS       
IPR001995   Peptidase_A2_cat       
IPR041577   RT_RNaseH_2       
IPR001584   Integrase_cat-core       
IPR000477   RT_dom       
IPR003034   SAP_dom       
IPR036397   RNaseH_sf       
IPR041588   Integrase_H2C2       
IPR021109   Peptidase_aspartic_dom_sf       
IPR041373   RT_RNaseH       
IPR019103   Peptidase_aspartic_DDI1-type       
IPR005162   Retrotrans_gag_dom       
IPR018061   Retropepsins       
IPR024650   Peptidase_A2B       
IPR034145   RP_RTVL-H-like       
IPR032071   DUF4806       
IPR028002   Myb_DNA-bind_5       

SUPFAM

SSF53098   SSF53098        + More
SSF57756   SSF57756       
SSF68906   SSF68906       
SSF50630   SSF50630       

Gene 3D

1.10.720.30     2.40.70.10     3.30.420.10    

CDD

cd06095  RP_RTVL_H_like

ProteinModelPortal

A0A0J7K9X8   J9JZ77   A0A023EYH9   A0A023EZG2   A0A0A1XB16   A0A023EYF0   + More
A0A023EY26   A0A023F013   J9JQ65   A0A1W7R6L8   W8C8Q1   W8APB2   A0A0A1XFE9   W8B0V9   A0A0J7K890   A0A0J7KLK4   A0A0J7NF11   X1X261   A0A2M4AEU2   A0A034VAM6   A0A034VLR3   Q24262   A0A034VKV9   Q961S4   A0A2M4CKM2   A0A224XHR1   A0A2S2PFS2   A0A2H8TRV6   J9LBS9   X1XU22   A0A2S2NKJ2   X1WPP0   A0A2S2NFQ4   X1X5H2   A0A1Y1MFA9   X1XU14   J9JJ45   A0A1W7R6H1   A0A2S2PGQ9   A0A1W7R6G2   X1XD76   A0A0J7KEC9   A0A1W7R6G1   A0A0C9RXL6   T1PMR9   A0A2S2QVZ0   A0A2S2PD17   A0A139WIB9   A0A0J7KQI5   J9L2R5   B7S8P8   A0A0J7KJ08   A0A2S2R3T0   A0A146M2J2   A0A034WRX5   A0A0A9X1Z8   X1XU38   J9KKW9  

PDB

4OL8     E-value=3.31928e-72,     Score=696

KEGG

101741951    K08155 MFS transporter, DHA1 family, solute carrier family 18 (vesicular amine transporter), member

GO

GO:0004190   GO:0008270   GO:0003676   GO:0015074   GO:0003964   GO:0005634   GO:0006508  

Length:

1267

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00303

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00018

outside

1  -  1267

 

 

Pi

5.268591

Theta

6.229332

Tajima's D

-1.088367

CLR

52.440507

CSRT

0.119694015299235

Interpretation

Uncertain