Gene

KWMTBOMO16102

Pre Gene Modal

BGIBMGA004623

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1-like_[Bombyx_mori]

Location

Bomo_Chr27(-):9173699-9178665      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.982

CDS

ATGGAGTCTTTTATAAAACAGGCCTTCGTCGTGAGCGGCGCTGCACTGAACATAGCAGGACACGGCTGTGCTCATGGCTACCCAGCTGTGCTCTTTGCGCAAATCGAAAGCAGCAAAGGCGACTTCAAACTCAGCGACCACGACACGTCATGGATTGCTTCAGTTGTCGGCGTTATGGGAATAGTGGGTAACTTCATATCGCCGGTTCTAATGACGAAGTATGGCCGTCAAAAAGCTCATCTCCTCACAACTATACCAGCTCTACTCGGCTGGCTGATATTCGTATTCGGAAACTCTGTCCCTCTATTCATTCTGGCGAGGCTACTCCACGGTCTGGCTTTAGGGCTAAGAACACCTTTAGCAGCGATATTAGTGGCAGAGTATACGGACCCAAAGTACAGGGGAGCGTTCTTGGGGACATTCGCCATATCACTAGGTCTCGGGATCTTCTTGTCACATCTTTGGGGAGCGCATTTAACGTGGAAAATGACTGCTGTGGTTTGTTCCATGTTCCCGTTGATCGCCATGGCGATAATATCTTTTTCTCCGGAGTCGCCGAGCTGGCTGGTCTCCAAAGGTAGGTACGAAGAGGCTAGGAAGTCATTTAGGTGGATTCGAGGCGGAGGTCCCGTACAAATGGAGGAGTTCGAAGCGATGGTTAATGCGCAGAAGGAAGAAGTGGCATCGGAAAAAAACGAACCGATACCAAAAAGGAATGGAATCTTCAAAACCGCGATAAATTCGATAAAGAGCGTCCTCAGAGTATTCAAGAAGAAAGAGTTTTATAAGCCGGCCGTCATAGCGATCAGCATGTTGGTCGTTTTCGAGTTCGGAGGAGCCCATATGTTCGCAGCCTACGGCAACACGATCCTCCAAGCCGTTTTGGACAAAGAAAACGCCACAGACGTGGCGTGGCAACTGACCGTGATGGACTTACTCCGCACGATCTGCGCGTTCTTGGCCATCTTCCTTTTGAAATACTGCAAAAGAAGAACGATATTATTCACCAGTGGCCTCACAACGGTTCTATCGCTCGCTTTTATATCTAGTTTTATTTACATGAGAAAAGCCGGTCTCTTCACGGCGACTTGGCTGCTGGAGCTAATGCCGATGTCCCTGATGATATTCTACACGGTCTCGTTTTGTCTTGGCCTCGTTCCATTGAACTGGGTTATATGTGGCGAAGTATTCCCGTTAGCTTACCGAAGTCTAGGATCTACTTTGTCAACGTCATTTTTGACGCCGTCTTTTGTGATCTCCATGAAGACGGCTCCACATTTGTATTCTTCTGTGGGGGTCGAGGGAGCGTTCCTGCTGTACTCGGCCATTTTAACGTTCTTCTTGGTTATAATGTATATTTTACTACCCGAAACCAAAGACAGGACCCTTCAAGATATCGAAGAAAGTTTTAAAGGCAAAAAGAACGCAGACCCGGAAGTACAAATGACGCTTATAAATAAAACCGATAGTGTGTTAGTCACGTAA

Protein

MESFIKQAFVVSGAALNIAGHGCAHGYPAVLFAQIESSKGDFKLSDHDTSWIASVVGVMGIVGNFISPVLMTKYGRQKAHLLTTIPALLGWLIFVFGNSVPLFILARLLHGLALGLRTPLAAILVAEYTDPKYRGAFLGTFAISLGLGIFLSHLWGAHLTWKMTAVVCSMFPLIAMAIISFSPESPSWLVSKGRYEEARKSFRWIRGGGPVQMEEFEAMVNAQKEEVASEKNEPIPKRNGIFKTAINSIKSVLRVFKKKEFYKPAVIAISMLVVFEFGGAHMFAAYGNTILQAVLDKENATDVAWQLTVMDLLRTICAFLAIFLLKYCKRRTILFTSGLTTVLSLAFISSFIYMRKAGLFTATWLLELMPMSLMIFYTVSFCLGLVPLNWVICGEVFPLAYRSLGSTLSTSFLTPSFVISMKTAPHLYSSVGVEGAFLLYSAILTFFLVIMYILLPETKDRTLQDIEESFKGKKNADPEVQMTLINKTDSVLVT

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9J533   A0A2A4JNG3   A0A0N1IG19   A0A194QJ30   A0A2H1X0D6   A0A0L7LRT2   + More
A0A212FPF6   H9J525   A0A2A4JTG8   A0A023PNK9   A0A2A4JT91   A0A2H1W936   A0A212F9B1   A0A194QJ23   A0A2H1WFL6   H9J4X7   A0A2W1BD78   A0A3S2LUZ6   A0A2A4JUU3   A0A2H1WAU6   A0A194QHU0   A0A194QJI7   A0A0N1IPS2   A0A212F161   A0A3S2P2D1   A0A2A4J748   A0A0L7KZR3   A0A2H1WVP2   A0A194QJ40   A0A2W1BG84   A0A2A4KAY2   A0A2H1WB04   A0A2W1BFI0   A0A212FJ74   A0A2A4JSU4   A0A0N1I9K7   A0A194QPY2   A0A0N1IHN6   A0A212FCC0   A0A2A4KA42   H9J4X0   H9J4X2   E0X906   A0A194QKX0   A0A2W1B9E8   A0A2H1WK46   A0A182KD28   H9J4R6   A0A2H1WFM1   A0A182RRX2   A0A182WKH8   A0A212F9C9   A0A3S2NWF9   A0A182XN09   A0A182VI49   A0A182NHP5   A0A2W1BDG5   A0A182MLS9   A0A0L7L8D8   A0A182LJ94   A0A182Y162   A0A182PHI4   A0A2A4JU31   A0A194QJ63   A0A1S4GQI2   H9J4S1   A0A194QJ80   A0A182IUY7   A0A3S2LEF2   Q7Q6Y6   A0A194QKY0   B0W5I2   A0A182U3G7   H9J4X1   A0A2A4KB29   A0A2A4JU29   A0A084VC86   A0A182HWW7   A0A139WGJ0   A0A0L7L7N1   A0A3S2NLE7   A0A2H1V0I3   A0A182GTB3   A0A0L7L8F3   A0A182GCQ0   A0A0N1IPZ8   A0A2W1BF54   A0A194R9K8   A0A336MJD0   Q17LS5   A0A336M7L2   W5JEJ5   A0A2H1W9B8   H9J4X3   A0A182FDK9   A0A1J1IVY8   A0A212FCB5   A0A194QEH9   B0W5I1   A0A2H1WKZ9  

Pubmed

19121390    26354079    26227816    22118469    24730650    28756777    + More
20966253    25244985    12364791    24438588    18362917    19820115    26483478    17510324    20920257    23761445   

EMBL

BABH01038850    NWSH01001042    PCG72950.1    KQ460077    KPJ17891.1    KQ458671    + More
KPJ05563.1    ODYU01012470    SOQ58795.1    JTDY01000230    KOB78170.1    AGBW02002687    OWR55626.1    BABH01038881    NWSH01000704    PCG74682.1    KJ439227    KZ150491    AHX25878.1    PZC70688.1    PCG74683.1    ODYU01007122    SOQ49615.1    AGBW02009614    OWR50324.1    KPJ05558.1    ODYU01008354    SOQ51875.1    BABH01025717    KZ150249    PZC71835.1    RSAL01000181    RVE44925.1    NWSH01000578    PCG75536.1    SOQ49614.1    KQ458981    KPJ04505.1    KPJ05554.1    KPJ17881.1    AGBW02010956    OWR47467.1    RSAL01000045    RVE50592.1    NWSH01002771    PCG67556.1    JTDY01004123    KOB68566.1    ODYU01011356    SOQ57052.1    KPJ05573.1    PZC71836.1    NWSH01000008    PCG80953.1    ODYU01007347    SOQ50032.1    KZ150133    PZC73021.1    AGBW02008317    OWR53759.1    PCG74684.1    KPJ17880.1    KPJ05561.1    KPJ17887.1    AGBW02009205    OWR51384.1    PCG80949.1    BABH01025733    BABH01025724    GQ871756    ADM86147.1    KPJ05555.1    PZC71838.1    ODYU01009098    SOQ53272.1    BABH01035548    SOQ51878.1    OWR50323.1    RVE50589.1    PZC71834.1    AXCM01002831    JTDY01002352    KOB71610.1    PCG75535.1    KPJ05557.1    AAAB01008960    BABH01035527    BABH01035528    BABH01035529    KPJ05572.1    RVE44926.1    EAA11457.4    KPJ05560.1    DS231843    EDS35465.1    BABH01025731    PCG80950.1    PCG75537.1    ATLV01010625    KE524589    KFB35580.1    APCN01001553    KQ971345    KYB27009.1    JTDY01002470    KOB71349.1    RVE50591.1    ODYU01000118    SOQ34347.1    JXUM01086634    KQ563580    KXJ73638.1    KOB71609.1    JXUM01009472    KQ560284    KXJ83288.1    KPJ17883.1    PZC71837.1    KQ460761    KPJ12541.1    UFQT01001316    SSX30005.1    CH477213    EAT47626.1    UFQT01000224    SSX22028.1    ADMH02001735    ETN61249.1    SOQ49613.1    BABH01025723    CVRI01000059    CRL03302.1    OWR51386.1    KQ459299    KPJ01871.1    EDS35464.1    ODYU01009373    SOQ53753.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000037510    UP000007151    + More
UP000283053    UP000075881    UP000075900    UP000075920    UP000076407    UP000075903    UP000075884    UP000075883    UP000075882    UP000076408    UP000075885    UP000075880    UP000007062    UP000002320    UP000075902    UP000030765    UP000075840    UP000007266    UP000069940    UP000249989    UP000008820    UP000000673    UP000069272    UP000183832   

PRIDE

H9J533    H9J525    H9J4X7    H9J4X0    H9J4X2    E0X906    + More
H9J4R6    H9J4S1    H9J4X1    H9J4X3   

Pfam

PF07690   MFS_1        + More
PF00083   Sugar_tr

Interpro

IPR011701   MFS        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR003663   Sugar/inositol_transpt       
IPR005828   MFS_sugar_transport-like       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9J533   A0A2A4JNG3   A0A0N1IG19   A0A194QJ30   A0A2H1X0D6   A0A0L7LRT2   + More
A0A212FPF6   H9J525   A0A2A4JTG8   A0A023PNK9   A0A2A4JT91   A0A2H1W936   A0A212F9B1   A0A194QJ23   A0A2H1WFL6   H9J4X7   A0A2W1BD78   A0A3S2LUZ6   A0A2A4JUU3   A0A2H1WAU6   A0A194QHU0   A0A194QJI7   A0A0N1IPS2   A0A212F161   A0A3S2P2D1   A0A2A4J748   A0A0L7KZR3   A0A2H1WVP2   A0A194QJ40   A0A2W1BG84   A0A2A4KAY2   A0A2H1WB04   A0A2W1BFI0   A0A212FJ74   A0A2A4JSU4   A0A0N1I9K7   A0A194QPY2   A0A0N1IHN6   A0A212FCC0   A0A2A4KA42   H9J4X0   H9J4X2   E0X906   A0A194QKX0   A0A2W1B9E8   A0A2H1WK46   A0A182KD28   H9J4R6   A0A2H1WFM1   A0A182RRX2   A0A182WKH8   A0A212F9C9   A0A3S2NWF9   A0A182XN09   A0A182VI49   A0A182NHP5   A0A2W1BDG5   A0A182MLS9   A0A0L7L8D8   A0A182LJ94   A0A182Y162   A0A182PHI4   A0A2A4JU31   A0A194QJ63   A0A1S4GQI2   H9J4S1   A0A194QJ80   A0A182IUY7   A0A3S2LEF2   Q7Q6Y6   A0A194QKY0   B0W5I2   A0A182U3G7   H9J4X1   A0A2A4KB29   A0A2A4JU29   A0A084VC86   A0A182HWW7   A0A139WGJ0   A0A0L7L7N1   A0A3S2NLE7   A0A2H1V0I3   A0A182GTB3   A0A0L7L8F3   A0A182GCQ0   A0A0N1IPZ8   A0A2W1BF54   A0A194R9K8   A0A336MJD0   Q17LS5   A0A336M7L2   W5JEJ5   A0A2H1W9B8   H9J4X3   A0A182FDK9   A0A1J1IVY8   A0A212FCB5   A0A194QEH9   B0W5I1   A0A2H1WKZ9  

PDB

6H7D     E-value=7.6603e-17,     Score=214

KEGG

101746944    no KO assigned | (RefSeq) facilitated trehalose transporter Tret1-like

GO

GO:0022857   GO:0016021   GO:0008643   GO:0005351   GO:0005887   GO:0005215   GO:0016020   GO:0022891   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259   GO:0055085  

Length:

494

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

241.91177

Exp number, first 60 AAs:

31.56052

Total prob of N-in:

0.91326

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  49

TMhelix

50  -  72

inside

73  -  83

TMhelix

84  -  106

outside

107  -  134

TMhelix

135  -  157

inside

158  -  265

TMhelix

266  -  288

outside

289  -  302

TMhelix

303  -  325

inside

326  -  331

TMhelix

332  -  354

outside

355  -  373

TMhelix

374  -  392

inside

393  -  398

TMhelix

399  -  421

outside

422  -  435

TMhelix

436  -  455

inside

456  -  494

 

 

Pi

234.772127

Theta

198.844269

Tajima's D

0.652952

CLR

0.169565

CSRT

0.56087195640218

Interpretation

Uncertain