SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16095  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004628
Annotation
PREDICTED:_uncharacterized_protein_LOC101746247_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.472
 

Sequence

CDS
ATGATGACGGTCAGCGAGACTCAGTTCTCTTCGAACAAAATGTCCAGCATCCACAAGATCAACGACAGGGTTGTCCACCGCGACAGCTTTGATGACGTCCAGAGCTCTTCATCAGTCAACAGTACTCTGGTCACGAAGCGAGGGTTCAAGCCGTCAGACATGTTCGACCCGCAGAAGAAGGAATTCCTCACCAATCTCAGTTATAAGTTGTTCCCTGTAAGTTGGGAAGACGTCGAGAACAAGGCCATCCTGGTGGGGGACAAGACGGTGGACCTGAACAAGATTTTCACACCAGCGCCTGATGCTGAAGAGCATATCATCAAGAAAGACCGTAAATTCGAAAAGACGTTCGCATCGTCCGCGTTCTATGTGCCCGGCGTCCACCCTACAGTCAAGGAACAGATGGATCTGGCGCGAGCCATTTCCAAGTCCTTGAGCGATTCCAGCAACCACATGAGCAAGGGCCAGAGCATGTACGTGAACAGGAAGAAGAGATCGGTCAAGTGGGTGCACGAGGGAAGAGGCCGGAACACTTCGAACACGTGCTCGACCCCCACCCCGGTGGCCAGCCACGACACGCCGTACCGACCGCCGTCCAGCCTGCGCAATCAGAAGACGTACCCAAAATCGGCACTAAAGCACTCGAGCCTGCCCAAAATCGACCCTCCAGTTTTTCCGCCTACAATAACGGTCCAGAACGTTGATCTGCCGGTACCAATGGCTCCGACGAAGCTGAATGACGTGTACGCTTCGCCGAAGAGCCCGCGGCTGCCCCTAGTGTCCGGGCCGAATTTCAATGTGGCGCCACGAGGCTGGGGCGACATGAAAGATTACTACCGACCGGTTTCGCTAGATGGCGTTGGCAAGGTGGCCGTCGGATTCTCTGATTTTTAA
Protein
MMTVSETQFSSNKMSSIHKINDRVVHRDSFDDVQSSSSVNSTLVTKRGFKPSDMFDPQKKEFLTNLSYKLFPVSWEDVENKAILVGDKTVDLNKIFTPAPDAEEHIIKKDRKFEKTFASSAFYVPGVHPTVKEQMDLARAISKSLSDSSNHMSKGQSMYVNRKKRSVKWVHEGRGRNTSNTCSTPTPVASHDTPYRPPSSLRNQKTYPKSALKHSSLPKIDPPVFPPTITVQNVDLPVPMAPTKLNDVYASPKSPRLPLVSGPNFNVAPRGWGDMKDYYRPVSLDGVGKVAVGFSDF

Summary

Ontologies

GO

Topology

Length:
297
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00117
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02714
outside
1  -  297
 
 

Population Genetic Test Statistics

Pi
354.124128
Theta
186.873029
Tajima's D
2.771267
CLR
0.246735
CSRT
0.966801659917004
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 QLIIMYGSVPLIVRLLASSVSVANRAGKIVRDVMSKGELGIVEKVRC 100.00 4e-39
28467696 NTSCVAAIIPTCHCDDGFIFDK 96.15 4e-11
28467696 TFANSIEGVR 100.00 3e-05
28467696 IFTIVTYVPVASIK 100.00 0.004
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