Gene

KWMTBOMO16094

Pre Gene Modal

BGIBMGA004629

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Papilio_polytes]

Location

Bomo_Chr27(-):8827641-8859184      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.958

CDS

ATGGCCGACGAAGTTATTTGTCACGAACACAGCTTAACGCCGTTTTTTAGACAGCTATTGGCTGTAAGCGGAGTCGTGATGTACATGATAGGGACCGGAGCGAACATCGCGTATCCCGGGGTCCTGTTGCAGCAACTGCGGCAGCCAGACTCAGCAGTTCAACTCACCCCGGACCACGAGTCTTGGGTTGCCTCAATACTGGGCTTGGCGCTGATCTCGGGTATTATCGTGGCGCCGTTCAGTCTGGAGCATCTGGGCAGACGCATCACCAACCAGCTCAGCACGTTGCCGGCTCTGGGCGGGTGGGCGTTGATGATCACGGCCAAGGGACCGGCAACCATCCTCATTAGTCGTTCATTGCAGGGATTTGCGATGGGTGTGCAAGCAGCTGCATCACCGGTGTCCATCGCAGAATACTCCTCACCAAAATACCGTGGCGCCTTTCTGGCCACAATAGCATTCGCATTCGCCGCGGGAATGCTAATAGCACACATCTTTGGCACCTTGCTGTACTGGCGATCAGCGGCTTTAGCGTGCGGCAGCTTCTATGCACTGTCCTTAGTTCTCGTTTCACTGACTCTGGAGACTCCGTCGTATCTGGCTTCGAAAGGCCTGGCAAACGAATGCAGGAGATCGTTTCACTGGTTCCGGGGCTACGATCAAGATTCGGAGAAAGAGCTCGAAGTGCTTCTACAGAGTCAGAAGAAAACGGGACACACGTTGATAACGGCCAAACAATCTAAGCTGAAGACTTATGCAGAGCTGATTAAGAAACCGGAATTTTACAAACCAACTCTGATCATGATGTTCATGTTTGTGCTGTTTCAAATATCTGGGATGACTGTGATACCTTCGTACACTGTGCCCGTCATGTGTGACGTAACAAGCGGCCTGATCGATGACAATATTGGCATGTTAATGGTCGACGTCGTGAGGTTTGGAACAGCAATACTGGCCTGCATTGTGGTCAACAGATTCAATAGACGAACTGTCCTTTTCTTTGGGATTATCATGACAGTTATATCGTTATTGACGACTGCTTTACTATTGTACCTCCGAGATTTTGGGTACCTTCCTGATGAATACAAATGGACTCCAGTTATCCCAACTCTATTTTACATTTTCGGCAAAACGTTGGGTATTTTGCCCATTCCTTGGGCCATTGCCGGAGAGATTTTCCCGTTGGCATACCGCAGCCTCGGTAGTGGGATTTCAGGGATGTTTCTGTCTATAATGTTTTTTGTCGTGGTCAAAACGGCACCGGCGTCCTTTGGTACTATTGGTATCAAGGGGACGTTCTGTCTGTACGCTTTTTGGGTCGCGGTATGCGGAATCTTTTTATACTTCATCCTACCGGAGACTAAAGGGAAGACTCTTTACGAAATCGAGAGGCAGTTTAAAGGTATGGCGGAAGAGGTAGCAGACCCTCGCGAGAACGAGAGGATGTTGGAACTGGGGAAAGTGGAAGGAGGTTGA

Protein

MADEVICHEHSLTPFFRQLLAVSGVVMYMIGTGANIAYPGVLLQQLRQPDSAVQLTPDHESWVASILGLALISGIIVAPFSLEHLGRRITNQLSTLPALGGWALMITAKGPATILISRSLQGFAMGVQAAASPVSIAEYSSPKYRGAFLATIAFAFAAGMLIAHIFGTLLYWRSAALACGSFYALSLVLVSLTLETPSYLASKGLANECRRSFHWFRGYDQDSEKELEVLLQSQKKTGHTLITAKQSKLKTYAELIKKPEFYKPTLIMMFMFVLFQISGMTVIPSYTVPVMCDVTSGLIDDNIGMLMVDVVRFGTAILACIVVNRFNRRTVLFFGIIMTVISLLTTALLLYLRDFGYLPDEYKWTPVIPTLFYIFGKTLGILPIPWAIAGEIFPLAYRSLGSGISGMFLSIMFFVVVKTAPASFGTIGIKGTFCLYAFWVAVCGIFLYFILPETKGKTLYEIERQFKGMAEEVADPRENERMLELGKVEGG

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9J539   A0A194QJ80   A0A3S2LEF2   A0A212F9C9   A0A0N0PE20   A0A2A4J655   + More
A0A2W1BJW9   A0A0L7KZ73   A0A2H1WAF2   A0A2H1WVP2   A0A212F9B1   H9J525   A0A3S2LUZ6   A0A2W1BFI0   A0A023PNK9   A0A2A4JTG8   A0A2A4J748   A0A0N1IG19   A0A2A4KAY2   A0A2W1BG84   H9J4X7   A0A2A4JUU3   A0A2H1W936   A0A2W1BD78   A0A182MLS9   A0A194QJ23   A0A182WKH8   A0A194QJ63   A0A182GCQ0   A0A182GTB3   B0W5I2   A0A2H1WB04   A0A194QJ30   A0A084VC86   A0A194R9K8   A0A336M7L2   A0A3S2P2D1   A0A212ENJ2   A0A336MJD0   A0A0L7L7N1   A0A2H1WFL6   A0A2A4JT91   A0A182RRX2   Q17LS5   A0A212F161   A0A194QPY2   A0A2H1WFM1   A0A182Y162   A0A2H1WAU6   A0A182PHI4   A0A0N1IPS2   A0A182KD28   A0A182VI49   H9J4S1   A0A2A4JU31   A0A182LJ94   A0A182XN09   A0A1B0CWH0   A0A0N1IHN6   A0A1L8DF47   A0A1L8DFA5   A0A182NHP5   A0A2W1BDG5   A0A2A4JNG3   A0A2H1V7H3   A0A194QEH9   A0A0N1IPZ8   A0A0L7KZR3   A0A139WGJ0   A0A1S4GQI2   A0A182IUY7   B0W5I1   A0A194QHU0   A0A2A4IVM9   A0A212FJ74   Q7Q6Y6   A0A2W1BF54   A0A0N1I9K7   A0A3S2NLE7   A0A182U3G7   A0A2J7RF66   A0A1S3CXE4   H9J4X3   A0A194QJI7   A0A3S2NWF9   A0A182HWW7   H9J4R6   A0A212FCB5   A0A2P8YLG4   A0A182QST8   A0A2A4KB29   A0A2A4JU29   A0A1B0DPM5   W5JEJ5   E0X906   A0A0A8J8L7   A0A0L7KM51   H9J4X2   H9IV67   A0A2H1WK46  

Pubmed

19121390    26354079    22118469    28756777    26227816    24730650    + More
26483478    24438588    17510324    25244985    20966253    18362917    19820115    12364791    29403074    20920257    23761445   

EMBL

BABH01038877    BABH01038878    BABH01038879    BABH01038880    BABH01038881    KQ458671    + More
KPJ05572.1    RSAL01000181    RVE44926.1    AGBW02009614    OWR50323.1    KQ460126    KPJ17588.1    NWSH01002771    PCG67555.1    KZ150133    PZC73020.1    JTDY01004123    KOB68563.1    ODYU01007347    SOQ50033.1    ODYU01011356    SOQ57052.1    OWR50324.1    RVE44925.1    PZC73021.1    KJ439227    KZ150491    AHX25878.1    PZC70688.1    NWSH01000704    PCG74682.1    PCG67556.1    KQ460077    KPJ17891.1    NWSH01000008    PCG80953.1    KZ150249    PZC71836.1    BABH01025717    NWSH01000578    PCG75536.1    ODYU01007122    SOQ49615.1    PZC71835.1    AXCM01002831    KPJ05558.1    KPJ05557.1    JXUM01009472    KQ560284    KXJ83288.1    JXUM01086634    KQ563580    KXJ73638.1    DS231843    EDS35465.1    SOQ50032.1    KPJ05563.1    ATLV01010625    KE524589    KFB35580.1    KQ460761    KPJ12541.1    UFQT01000224    SSX22028.1    RSAL01000045    RVE50592.1    AGBW02013662    OWR43027.1    UFQT01001316    SSX30005.1    JTDY01002470    KOB71349.1    ODYU01008354    SOQ51875.1    PCG74683.1    CH477213    EAT47626.1    AGBW02010956    OWR47467.1    KPJ05561.1    SOQ51878.1    SOQ49614.1    KPJ17881.1    BABH01035527    BABH01035528    BABH01035529    PCG75535.1    AJWK01032461    KPJ17887.1    GFDF01009026    JAV05058.1    GFDF01009027    JAV05057.1    PZC71834.1    NWSH01001042    PCG72950.1    ODYU01001065    SOQ36788.1    KQ459299    KPJ01871.1    KPJ17883.1    KOB68566.1    KQ971345    KYB27009.1    AAAB01008960    EDS35464.1    KQ458981    KPJ04505.1    NWSH01006268    PCG63546.1    AGBW02008317    OWR53759.1    EAA11457.4    PZC71837.1    KPJ17880.1    RVE50591.1    NEVH01004413    PNF39483.1    BABH01025723    KPJ05554.1    RVE50589.1    APCN01001553    BABH01035548    AGBW02009205    OWR51386.1    PYGN01000511    PSN45090.1    AXCN02000368    PCG80950.1    PCG75537.1    AJVK01008157    ADMH02001735    ETN61249.1    GQ871756    ADM86147.1    AB901078    BAQ02378.1    JTDY01008796    KOB64392.1    BABH01025724    BABH01000587    ODYU01009098    SOQ53272.1   

Proteomes

UP000005204    UP000053268    UP000283053    UP000007151    UP000053240    UP000218220    + More
UP000037510    UP000075883    UP000075920    UP000069940    UP000249989    UP000002320    UP000030765    UP000075900    UP000008820    UP000076408    UP000075885    UP000075881    UP000075903    UP000075882    UP000076407    UP000092461    UP000075884    UP000007266    UP000075880    UP000007062    UP000075902    UP000235965    UP000079169    UP000075840    UP000245037    UP000075886    UP000092462    UP000000673   

PRIDE

H9J539    H9J525    H9J4X7    H9J4S1    H9J4X3    H9J4R6    + More
E0X906    H9J4X2    H9IV67   

Pfam

PF00083   Sugar_tr

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR003663   Sugar/inositol_transpt       
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
IPR005829   Sugar_transporter_CS       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9J539   A0A194QJ80   A0A3S2LEF2   A0A212F9C9   A0A0N0PE20   A0A2A4J655   + More
A0A2W1BJW9   A0A0L7KZ73   A0A2H1WAF2   A0A2H1WVP2   A0A212F9B1   H9J525   A0A3S2LUZ6   A0A2W1BFI0   A0A023PNK9   A0A2A4JTG8   A0A2A4J748   A0A0N1IG19   A0A2A4KAY2   A0A2W1BG84   H9J4X7   A0A2A4JUU3   A0A2H1W936   A0A2W1BD78   A0A182MLS9   A0A194QJ23   A0A182WKH8   A0A194QJ63   A0A182GCQ0   A0A182GTB3   B0W5I2   A0A2H1WB04   A0A194QJ30   A0A084VC86   A0A194R9K8   A0A336M7L2   A0A3S2P2D1   A0A212ENJ2   A0A336MJD0   A0A0L7L7N1   A0A2H1WFL6   A0A2A4JT91   A0A182RRX2   Q17LS5   A0A212F161   A0A194QPY2   A0A2H1WFM1   A0A182Y162   A0A2H1WAU6   A0A182PHI4   A0A0N1IPS2   A0A182KD28   A0A182VI49   H9J4S1   A0A2A4JU31   A0A182LJ94   A0A182XN09   A0A1B0CWH0   A0A0N1IHN6   A0A1L8DF47   A0A1L8DFA5   A0A182NHP5   A0A2W1BDG5   A0A2A4JNG3   A0A2H1V7H3   A0A194QEH9   A0A0N1IPZ8   A0A0L7KZR3   A0A139WGJ0   A0A1S4GQI2   A0A182IUY7   B0W5I1   A0A194QHU0   A0A2A4IVM9   A0A212FJ74   Q7Q6Y6   A0A2W1BF54   A0A0N1I9K7   A0A3S2NLE7   A0A182U3G7   A0A2J7RF66   A0A1S3CXE4   H9J4X3   A0A194QJI7   A0A3S2NWF9   A0A182HWW7   H9J4R6   A0A212FCB5   A0A2P8YLG4   A0A182QST8   A0A2A4KB29   A0A2A4JU29   A0A1B0DPM5   W5JEJ5   E0X906   A0A0A8J8L7   A0A0L7KM51   H9J4X2   H9IV67   A0A2H1WK46  

PDB

6H7D     E-value=2.30751e-13,     Score=184

KEGG

101746387    no KO assigned | (RefSeq) facilitated trehalose transporter Tret1-like

GO

GO:0022857   GO:0016021   GO:0008643   GO:0005351   GO:0005887   GO:0016020   GO:0022891   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259   GO:0055085  

Length:

491

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

226.9352

Exp number, first 60 AAs:

22.8523

Total prob of N-in:

0.84297

POSSIBLE N-term signal

sequence

inside

1  -  19

TMhelix

20  -  42

outside

43  -  61

TMhelix

62  -  82

inside

83  -  145

TMhelix

146  -  168

outside

169  -  171

TMhelix

172  -  194

inside

195  -  265

TMhelix

266  -  288

outside

289  -  302

TMhelix

303  -  324

inside

325  -  330

TMhelix

331  -  353

outside

354  -  367

TMhelix

368  -  390

inside

391  -  394

TMhelix

395  -  417

outside

418  -  431

TMhelix

432  -  451

inside

452  -  491

 

 

Pi

201.372912

Theta

171.363531

Tajima's D

0.716861

CLR

0.378609

CSRT

0.575021248937553

Interpretation

Uncertain