Gene

KWMTBOMO16093

Pre Gene Modal

BGIBMGA004615

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Papilio_polytes]

Location

Bomo_Chr27(+):8800195-8827209      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.99

CDS

ATGGGTGAGACTGTTGAAATAAAAGAAGGCAAATACACACCTTTGCTTAGACAGTGCTTTGTGACGGCCAGCGTCGCCATTAACATCGTGGGCCATGGCTGCGTCATCGGCTTCCCGGCTATATTGATTCCGAGTCTCCGGAAATCAGATTCCCACATCCATCTTACCAGATCTGAGGAGTCATGGATAGCATCTGTCGTCGGTTTCGCCCTCATCGTGGGAAACTTCATAATCACATTAATTCTGGACAACATCGGCAGGAAGAAGTCTCACATCCTCACCATTTTCCCAAACCTCGCCGGCTGGTTCCTGTTTCTACTAGTCAACAACTTTCCTGGTCTCATGGCGGCCAGGTTCCTCCAAGGAATCGCGATGGGCATGCTTGGACCTTTGGGCTCAATAATAATTGGAGAAATGACGGACCCAAAAAGCCGTGGAGTCTTTCTGACTAGTGTTTCTTTGTCACTGACCCTTGGGGTACTTTCCAGTCACGCTTTAGGGACGTGCTTCACTTGGCAGATCAGTGCTTTGCTGTGTTCATTAGTGACATTCATTAGCCTGTGCTTGATTATATTCACTCCGGAATCTCCATCGTGGCTCCTTTCAAAAGGACGCTACGACGAAGCCAGAGAGGGTTTCTTTTGGTTGCGAGGGAAGAATGCGAAAACGGAGCATGAATTGGAACGGATGATAACGTCTCAGAAGATGACTCGTAAAGCCAGTATTACAGGACAAAAAGATACAGTGAAAGCAAATCTCAAGAACTACTTCAGGTATTTAAGCGAAGCGGGCAAGAAGCCGGAGTTTGTGAAGCCCGTAGTGATAATGGTGTTCCTTTACATCATGTTCCAGTTCGCCGGTATAAACGTGATCAGTTCCTACGCTACCGACATCTTAGCAGAACTCCTTGATTCCGAGGCGAATTCAAACTTTCTGATGGTCGCTTTGGACATCGAAAGGCTGATATGCAATTTAATCGCCATATACCTTATGAAAACGTTAAAGAGAAGAACCCTTCTGTTCAGTACAACGATCATTTGTATTCTGGCATACATCAGTAAAGGATCCTACGTTTACGCCAAGCAAGCTGGCATATTAACTTATGACAGCCAATGGATTCCAATCACTTTAATTGGCATATATATGTTTTCGTTAACTGTGGGCGTGTCTTCGATACCATTTGCGTTATCAGGGGAGCTTTTCCCGTTGGATTACCGTGGCTTAGGTGGCGGGGTCAGCTACTTAGCTTTGTCTCTTAATTTCTTCATCGCTGTTAAATGTTTCCCTGTTTTAAGCTCAGCAATAGGGTTGTCGTTCACGTACTTCTTGTACGCTGGTATTGTGACGATTTGCATGGTGGTAGTTTGGATTATGTTACCAGAAACTAAAGACAAAACCCTGCAAGAGATAGAGGATAGGTTTAGGGGTTACACTGCTGAGGATGTCAAGAGTTCTCAGCCTCTCAACGCGGCCAATGGAGGCGGGGAGATGATGCGTAGATGTAGCTCTCATATTTTGTACTGA

Protein

MGETVEIKEGKYTPLLRQCFVTASVAINIVGHGCVIGFPAILIPSLRKSDSHIHLTRSEESWIASVVGFALIVGNFIITLILDNIGRKKSHILTIFPNLAGWFLFLLVNNFPGLMAARFLQGIAMGMLGPLGSIIIGEMTDPKSRGVFLTSVSLSLTLGVLSSHALGTCFTWQISALLCSLVTFISLCLIIFTPESPSWLLSKGRYDEAREGFFWLRGKNAKTEHELERMITSQKMTRKASITGQKDTVKANLKNYFRYLSEAGKKPEFVKPVVIMVFLYIMFQFAGINVISSYATDILAELLDSEANSNFLMVALDIERLICNLIAIYLMKTLKRRTLLFSTTIICILAYISKGSYVYAKQAGILTYDSQWIPITLIGIYMFSLTVGVSSIPFALSGELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGIVTICMVVVWIMLPETKDKTLQEIEDRFRGYTAEDVKSSQPLNAANGGGEMMRRCSSHILY

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9J525   A0A0L7KZR3   A0A2H1WB04   A0A2W1BFI0   A0A212F9B1   A0A2A4J748   + More
A0A3S2LUZ6   A0A194QJ40   H9J4X7   A0A212F161   A0A3S2P2D1   A0A023PNK9   A0A194QPY2   A0A2A4JTG8   A0A212FJ74   A0A0N1IHN6   A0A2A4JUU3   A0A2W1BD78   A0A2H1W936   A0A2H1WFL6   A0A2H1WVP2   A0A2A4JT91   H9J4R6   A0A0N1IPS2   A0A194QHU0   A0A2W1BG84   A0A2A4KAY2   A0A194QJ23   A0A194QJI7   A0A2H1WAU6   H9J4S1   H9J4X1   A0A0N1I9K7   A0A2A4KA42   A0A194QKX0   A0A2A4JNG3   A0A212FCC0   H9J4X0   A0A2A4JSU4   A0A0N1IG19   A0A2W1B9E8   A0A0L7L8D8   A0A3S2NWF9   A0A194QJ30   A0A2A4JU29   A0A2H1V0I3   A0A0L7L8F3   A0A194QJ80   A0A2H1X0D6   A0A2H1W9B8   H9J4W9   A0A0L7LRT2   A0A3S2LEF2   H9J539   A0A212F9C9   A0A2H1WKZ9   A0A194QJ63   A0A2H1WK46   E0X906   H9J4U8   A0A336MDU0   A0A2A4KB29   H9J4X2   A0A0N1IPZ8   A0A0L7L7N1   A0A182PHI4   A0A182MLS9   A0A212ENJ2   A0A0L7LQ31   A0A182VI49   A0A182LJ94   A0A182WKH8   A0A182XN09   A0A0N0PE20   H9J4S0   A0A182NHP5   A0A084VC86   A0A194QJJ6   A0A182RRX2   H9J4X3   A0A182Y162   A0A182IUY7   A0A194QKY0   A0A2A4J655   A0A182KD28   A0A3S2NLE7   A0A1S4GQI2   A0A2W1BF54   A0A2W1BN20   Q7Q6Y6   A0A182HWW7   H9J4R7   A0A1L8DF47   A0A336MJD0   A0A182U3G7   A0A2A4IVM9   A0A1L8DFA5  

Pubmed

19121390    26227816    28756777    22118469    26354079    24730650    + More
20966253    24438588    25244985    12364791   

EMBL

BABH01038881    JTDY01004123    KOB68566.1    ODYU01007347    SOQ50032.1    KZ150133    + More
PZC73021.1    AGBW02009614    OWR50324.1    NWSH01002771    PCG67556.1    RSAL01000181    RVE44925.1    KQ458671    KPJ05573.1    BABH01025717    AGBW02010956    OWR47467.1    RSAL01000045    RVE50592.1    KJ439227    KZ150491    AHX25878.1    PZC70688.1    KPJ05561.1    NWSH01000704    PCG74682.1    AGBW02008317    OWR53759.1    KQ460077    KPJ17887.1    NWSH01000578    PCG75536.1    KZ150249    PZC71835.1    ODYU01007122    SOQ49615.1    ODYU01008354    SOQ51875.1    ODYU01011356    SOQ57052.1    PCG74683.1    BABH01035548    KPJ17881.1    KQ458981    KPJ04505.1    PZC71836.1    NWSH01000008    PCG80953.1    KPJ05558.1    KPJ05554.1    SOQ49614.1    BABH01035527    BABH01035528    BABH01035529    BABH01025731    KPJ17880.1    PCG80949.1    KPJ05555.1    NWSH01001042    PCG72950.1    AGBW02009205    OWR51384.1    BABH01025733    PCG74684.1    KPJ17891.1    PZC71838.1    JTDY01002352    KOB71610.1    RVE50589.1    KPJ05563.1    PCG75537.1    ODYU01000118    SOQ34347.1    KOB71609.1    KPJ05572.1    ODYU01012470    SOQ58795.1    SOQ49613.1    JTDY01000230    KOB78170.1    RVE44926.1    BABH01038877    BABH01038878    BABH01038879    BABH01038880    OWR50323.1    ODYU01009373    SOQ53753.1    KPJ05557.1    ODYU01009098    SOQ53272.1    GQ871756    ADM86147.1    BABH01035543    UFQT01001016    SSX28504.1    PCG80950.1    BABH01025724    KPJ17883.1    JTDY01002470    KOB71349.1    AXCM01002831    AGBW02013662    OWR43027.1    JTDY01000342    KOB77618.1    KQ460126    KPJ17588.1    BABH01035538    BABH01035539    ATLV01010625    KE524589    KFB35580.1    KPJ05559.1    BABH01025723    KPJ05560.1    PCG67555.1    RVE50591.1    AAAB01008960    PZC71837.1    KZ150067    PZC74120.1    EAA11457.4    APCN01001553    BABH01035544    GFDF01009026    JAV05058.1    UFQT01001316    SSX30005.1    NWSH01006268    PCG63546.1    GFDF01009027    JAV05057.1   

Proteomes

UP000005204    UP000037510    UP000007151    UP000218220    UP000283053    UP000053268    + More
UP000053240    UP000075885    UP000075883    UP000075903    UP000075882    UP000075920    UP000076407    UP000075884    UP000030765    UP000075900    UP000076408    UP000075880    UP000075881    UP000007062    UP000075840    UP000075902   

PRIDE

H9J525    H9J4X7    H9J4R6    H9J4S1    H9J4X1    H9J4X0    + More
H9J4W9    H9J539    E0X906    H9J4U8    H9J4X2    H9J4S0    H9J4X3    H9J4R7   

Pfam

PF00083   Sugar_tr

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR036259   MFS_trans_sf       
IPR003663   Sugar/inositol_transpt       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9J525   A0A0L7KZR3   A0A2H1WB04   A0A2W1BFI0   A0A212F9B1   A0A2A4J748   + More
A0A3S2LUZ6   A0A194QJ40   H9J4X7   A0A212F161   A0A3S2P2D1   A0A023PNK9   A0A194QPY2   A0A2A4JTG8   A0A212FJ74   A0A0N1IHN6   A0A2A4JUU3   A0A2W1BD78   A0A2H1W936   A0A2H1WFL6   A0A2H1WVP2   A0A2A4JT91   H9J4R6   A0A0N1IPS2   A0A194QHU0   A0A2W1BG84   A0A2A4KAY2   A0A194QJ23   A0A194QJI7   A0A2H1WAU6   H9J4S1   H9J4X1   A0A0N1I9K7   A0A2A4KA42   A0A194QKX0   A0A2A4JNG3   A0A212FCC0   H9J4X0   A0A2A4JSU4   A0A0N1IG19   A0A2W1B9E8   A0A0L7L8D8   A0A3S2NWF9   A0A194QJ30   A0A2A4JU29   A0A2H1V0I3   A0A0L7L8F3   A0A194QJ80   A0A2H1X0D6   A0A2H1W9B8   H9J4W9   A0A0L7LRT2   A0A3S2LEF2   H9J539   A0A212F9C9   A0A2H1WKZ9   A0A194QJ63   A0A2H1WK46   E0X906   H9J4U8   A0A336MDU0   A0A2A4KB29   H9J4X2   A0A0N1IPZ8   A0A0L7L7N1   A0A182PHI4   A0A182MLS9   A0A212ENJ2   A0A0L7LQ31   A0A182VI49   A0A182LJ94   A0A182WKH8   A0A182XN09   A0A0N0PE20   H9J4S0   A0A182NHP5   A0A084VC86   A0A194QJJ6   A0A182RRX2   H9J4X3   A0A182Y162   A0A182IUY7   A0A194QKY0   A0A2A4J655   A0A182KD28   A0A3S2NLE7   A0A1S4GQI2   A0A2W1BF54   A0A2W1BN20   Q7Q6Y6   A0A182HWW7   H9J4R7   A0A1L8DF47   A0A336MJD0   A0A182U3G7   A0A2A4IVM9   A0A1L8DFA5  

PDB

4LDS     E-value=2.3754e-22,     Score=262

KEGG

101746523    no KO assigned | (RefSeq) facilitated trehalose transporter Tret1-like

GO

GO:0016021   GO:0022857   GO:0008643   GO:0005351   GO:0005887   GO:0005215   GO:0051082   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259   GO:0055085  

Length:

507

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

241.81319

Exp number, first 60 AAs:

23.03916

Total prob of N-in:

0.86902

POSSIBLE N-term signal

sequence

inside

1  -  20

TMhelix

21  -  43

outside

44  -  62

TMhelix

63  -  82

inside

83  -  94

TMhelix

95  -  117

outside

118  -  144

TMhelix

145  -  167

inside

168  -  173

TMhelix

174  -  193

outside

194  -  272

TMhelix

273  -  295

inside

296  -  337

TMhelix

338  -  360

outside

361  -  374

TMhelix

375  -  397

inside

398  -  409

TMhelix

410  -  432

outside

433  -  436

TMhelix

437  -  459

inside

460  -  507

 

 

Pi

19.988224

Theta

15.961123

Tajima's D

0.884956

CLR

0.15276

CSRT

0.634818259087046

Interpretation

Uncertain