SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16092
Annotation
PREDICTED:_carbohydrate_sulfotransferase_4-like_[Papilio_polytes]
Location in the cell
Mitochondrial   Reliability : 3.065
 

Sequence

CDS
ATGTGGCGACTAGTCAAACTGTATTCAATATGTTTCGCATTCTGTCTCAGTGTCCTTTTGATCCTAACCCGAACCCGAAGCGCAGGTAACACAAATTACTTGACACCTGAACTCCTTAAGAACGCCAGGTACTTTTTAGACTTAAATAATAGACGGGATGCCGAATCGCATCCAATACCAACGAATCGTCAAGATCAAACACCGAACATCGAGAAAATATTAGATAGAACCAGAGCGAAAATTAAATTTGAACTACGAGACTACAACTTCACTTATTCCGGAGTTCAAAGATTGGAGGACTTAGTGATGGAAACCAACGGTCGTCCCTTGAGGAATATCATCATATCCTCTTGGAGATCGGGCACCACGTTCCTCGGCGAGGTCCTTAACGCTATACCTGGGAACTACTATCATTTTCAGCCCTTACTGAAATATGGACACGTTCAACTCAAACGGTATTCGCAAATAAAAACAGCTTTAAGCTCCATAAAAAGTTTGCTCAACTGTAACTTTCAAGGTATGGACGGCTACTTTGATTACGGAAGACAACACGATTTTCAGTTTAGCCACAACACCAGATTATGGGATCATTGTAAACACAACATTGACCTGTGTTCAGATTCTGATTTCATGTCGAAATATTGCAAATTATTCCCGTTTCAAAGTATGAAAATCCTTCGCCTCAGGTTGCGTTTTGTTAAACAAATATTGAATGATACGAAACTGGACGTGAAAGTGGTGTTCCTGACCCGTGATCCTCGTGGAGTGATGCAGTCGAGGCTGCACCGTGGATTCTGTCGCGCCGCTCCGGATTGCTCGAATGCTGAGACCCTTTGCATGGGCATGACAAGCGATTATATGGCTGCAGGTCGCTTGCTGAAACGTTATCCTAATAGACTTCTTCTACTACGCTTCGAAGAGCTAGCCCTAAACCTGAATAGTACAATGCAAAAACTGCTGAAGTTCTTAAGGCTCGAACACAAACAAGCGCTTGATGAGTACCTCAACTCCCATACTAACACCGAAGTGAGTGGAGTGACCTCTACATTCAGAATATCCCGTGACGTTCCTTTTCGCTGGAAGGATACTTTAAATTTTGAATATGCTGACAGAATCCAAGCTACTTGTAAAGGTGCTATGAAATTATGGGGCTATCGTATAGCTCACAATGCCAGGCATATGGCCAGTAAGGACTTTGATCCCCTAGAACCGTACAAGGTACCTCATTAA
Protein
MWRLVKLYSICFAFCLSVLLILTRTRSAGNTNYLTPELLKNARYFLDLNNRRDAESHPIPTNRQDQTPNIEKILDRTRAKIKFELRDYNFTYSGVQRLEDLVMETNGRPLRNIIISSWRSGTTFLGEVLNAIPGNYYHFQPLLKYGHVQLKRYSQIKTALSSIKSLLNCNFQGMDGYFDYGRQHDFQFSHNTRLWDHCKHNIDLCSDSDFMSKYCKLFPFQSMKILRLRLRFVKQILNDTKLDVKVVFLTRDPRGVMQSRLHRGFCRAAPDCSNAETLCMGMTSDYMAAGRLLKRYPNRLLLLRFEELALNLNSTMQKLLKFLRLEHKQALDEYLNSHTNTEVSGVTSTFRISRDVPFRWKDTLNFEYADRIQATCKGAMKLWGYRIAHNARHMASKDFDPLEPYKVPH

Summary

EMBL
BABH01002828    KZ150252    PZC71813.1    NWSH01001165    PCG72299.1    BABH01035433    + More
KQ459596    KPI95547.1    JTDY01006122    KOB66269.1    GDQN01007329    JAT83725.1    AGBW02010386    OWR48599.1    ODYU01008345    SOQ51850.1    NWSH01001302    PCG71793.1    ODYU01009801    SOQ54463.1    KQ981037    KYN10153.1    KQ977372    KYN03270.1    KQ434781    KZC04460.1    KQ982351    KYQ57277.1    GL436803    EFN71447.1    KQ981208    KYN44742.1    KQ435798    KOX73445.1    ADTU01021189    KQ976738    KYM75862.1    GL445346    EFN89717.1    KQ414618    KOC67872.1    GBBI01000854    JAC17858.1    GL888208    EGI64923.1    GFDL01004106    JAV30939.1    GBGD01002022    JAC86867.1    GFTR01005883    JAW10543.1    KK107109    EZA59087.1    KQ768301    OAD53180.1    QOIP01000008    RLU19480.1    GEDC01006830    JAS30468.1    KZ150220    PZC72110.1    GDKW01000995    JAI55600.1    LBMM01009033    KMQ88446.1    GANO01003598    JAB56273.1    GL765974    EFZ15802.1    GECU01030951    GECU01011815    JAS76755.1    JAS95891.1    NEVH01002552    PNF42123.1    KT000411    ANI86009.1    GFDF01000388    JAV13696.1    KQ971379    EEZ97506.1    GBXI01015028    JAC99263.1    ATLV01023441    ATLV01023442    KE525343    KFB49191.1    ACPB03008218    GFDF01000347    JAV13737.1    GAMC01015499    JAB91056.1    GGFJ01006886    MBW56027.1    GDHF01000558    JAI51756.1    LJIG01022773    KRT78793.1    AAAB01008980    EAA13965.4    GAKP01011303    JAC47649.1    KK852463    KDR23407.1    APCN01001736    APCN01001737    GGFJ01005564    MBW54705.1    NNAY01003711    OXU18970.1    GGFL01003157    MBW67335.1    GGFL01003155    MBW67333.1    GGFJ01006989    MBW56130.1    KK854611    PTY17342.1    GGFL01003156    MBW67334.1    CH916372    EDV99064.1    LJIJ01000428    ODM97584.1    CH954177    EDV59088.1    GAHY01002424    JAA75086.1    GEBQ01004182    JAT35795.1    CM000157    EDW87883.1    GBRD01017735    GBRD01017734    JAG48092.1    CM000361    CM002910    EDX03971.1    KMY88539.1    AE014134    AY058647    AAF52398.2    AAL13876.1    GBHO01044786    GBHO01044781    GBHO01040122    GBHO01016022    JAF98817.1    JAF98822.1    JAG03482.1    JAG27582.1    GBHO01044787    GBHO01027405    GBHO01027400    GBHO01011544    GBHO01004808    JAF98816.1    JAG16199.1    JAG16204.1    JAG32060.1    JAG38796.1    CH933807    EDW11697.1    GBHO01044784    GBHO01044778    GBHO01040135    GBHO01027415    GBHO01027398    GBHO01017744    GBHO01011554    GBHO01004806    GBHO01004790    GBHO01004626    GDHC01010460    JAF98819.1    JAF98825.1    JAG03469.1    JAG16189.1    JAG16206.1    JAG25860.1    JAG32050.1    JAG38798.1    JAG38814.1    JAG38978.1    JAQ08169.1    GDHC01020608    JAP98020.1    CP012523    ALC40205.1    GBHO01044785    GBHO01044777    GBHO01017003    GBHO01016015    GBHO01004627    JAF98818.1    JAF98826.1    JAG26601.1    JAG27589.1    JAG38977.1    CH940654    EDW57887.1    AAZX01008730    AAZX01013956    CH379058    EAL34361.2    CH964214    EDW80374.1    GDRN01092452    JAI60106.1    OUUW01000006    SPP82351.1    DS235171    EEB12846.1    CH902620    EDV32185.2    AXCN02000692    IACF01008011    LAB73594.1    JRES01000933    KNC27105.1    KA648844    AFP63473.1    ADMH02002127    ETN58633.1   
Pfam
PF00685   Sulfotransfer_1
Interpro
IPR000863   Sulfotransferase_dom        + More
IPR027417   P-loop_NTPase       
SUPFAM
SSF52540   SSF52540       

Ontologies

Topology

SignalP
Position:   1 - 27,         Likelihood:  0.598808
 
 
Length:
409
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
17.27712
Exp number, first 60 AAs:
17.19065
Total prob of N-in:
0.85722
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  24
outside
25  -  409
 
 

Population Genetic Test Statistics

Pi
311.189341
Theta
224.592388
Tajima's D
1.008512
CLR
0
CSRT
0.662816859157042
Interpretation
Uncertain
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