Gene

KWMTBOMO16086

Pre Gene Modal

BGIBMGA004630

Annotation

PREDICTED:_protein_lethal(2)essential_for_life-like_[Amyelois_transitella]

Location

Bomo_Chr27(-):8733989-8734684      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.226

CDS

ATGGCGTTGTTACCATACTTATTGGATGATTTGCGTCCTCATCGCATTCGGGACCAGCTCTTCGGTATGGATTTGTCTCCGGACGATTTTCTAGCGGACATTATTGATCGGCCAATTGTGCGCATGAAATATGTACGTCCGTGGCGAAACTTGGCAGCTGCCGCTCGCGACGTCGGTTCGACCATCAAGACTGACAGAGACAAACTCCAGATCAATCTGGATGTTCAACATTTCACGCCTGAGGAGATATCTGTGAAGACTGCGGACGGGTACATCGTGATCGAAGGACAACACGAAGAGAAACAAGATGAGCATGGTTACGTTACGCGCCATTTCAAGCGTCGTTATGCTCTGCCTGAAGGATGTAAGCCGGAGACCGTGGAATCTAGACTGTCTTCGGATGGGGTGTTGACGGTTATAGCTCCGAAATCCTCTCAGAGTAAGGACGAGAGAGCTGTTCCTATTACCCACACCGGTCCGGTTAGAAGAAAGCAGCATGACGACGACCAGATCAATGGAAATGCGGAAGAAGAAACTAAATCGCCTCAGAAGAAACGAAAACGGTAA

Protein

MALLPYLLDDLRPHRIRDQLFGMDLSPDDFLADIIDRPIVRMKYVRPWRNLAAAARDVGSTIKTDRDKLQINLDVQHFTPEEISVKTADGYIVIEGQHEEKQDEHGYVTRHFKRRYALPEGCKPETVESRLSSDGVLTVIAPKSSQSKDERAVPITHTGPVRRKQHDDDQINGNAEEETKSPQKKRKR

Similarity

Belongs to the small heat shock protein (HSP20) family.

Uniprot

H9J540   A0A2W1BH28   A0A2A4K9P8   A0A2H1WKW0   A0A0L7L8L1   F1C930   + More
A0A222NUK4   A0A0K0XR51   A0A212FBC6   A0A2H4G806   A0A194QKZ3   A0A220W0C8   A0A3S2L9M7   A0A385PHG6   A0A0A7BZ27   A0A0N1PFQ5   A0A0A7BZF0   A0A212FIM4   A0A194Q5N9   A0A212F0A4   F1C928   A0A212ERQ7   A0A0N1PIZ2   Q1AMF5   A0A222NUL2   A0A0K0XQY0   Q5R1P6   B9VTS0   A0A161GJ22   A0A2W1BHM1   A0A0N1INR0   Q9GSB6   A0A2H1X0S0   A0A2A4J9F7   E2F3A1   A0A0A7BZM3   A0A222NUK8   A0A2A4JK93   Q1HAT5   I4DMV4   A0A2A4J3F8   R4HL93   Q5MGN8   A0A0N0PBJ9   Q5R1P7   A0A2H4LI82   A0A0A7BZF3   A0A0K0XQX1   Q5MGL1   B9VTS8   M1FKQ7   A0A212FJB9   A0A0A7RE39   Q0KKB1   A0A0A7RCH5   A0A194QB65   A0A0A7RCE5   A0A212EIS5   Q2LCS7   A0A0C5PKY8   Q9GN07   E2F399   A0A2H1W170   S4P4G2   A0A0P0CJ81   A0A3S2PJT0   A0A2H1W1Y8   A0A0L7K2K7   A0A0A7BZ70   B2ZHW3   A0A2H4LHL7   A0A2D1CRQ9   A0A2D1CRP7   A0A2A4J9J4   A0A343EU23   R9S0D1   A0A0L7L9D3   R9RZX9   E2F397   A0A1E1W5U5   A0A194Q6N8   O18634   A0A2H1W2W7   A0A212EIS8   A0A2A4JUN7   S4NMP5   A0A2W1BPZ5   A0A2A4JVR5   A0A075BR54   A0A2H1WH29   A0A2A4JLW2   A0A345W859   E2F398   A0A222NUL6   A0A194PVM7   U5QB76   H9J4S5   F1C929   Q5R1P4   Q1AMF7  

Pubmed

19121390    28756777    26227816    28755305    26196395    22118469    + More
26354079    28687981    24947609    17031055    21510953    22651552    16023793    23763950    25514417    17630658    18804477    25527122    23622113    9654738   

EMBL

BABH01042227    KZ150133    PZC73025.1    NWSH01000008    PCG80951.1    ODYU01009326    + More
SOQ53668.1    JTDY01002346    KOB71621.1    HQ219477    ADX96002.1    KX958471    ASQ43187.1    KP843904    AKS40083.1    AGBW02009356    OWR51030.1    KU522480    APX61066.1    KQ458671    KPJ05575.1    KY701309    ASK86231.1    RSAL01000078    RVE48718.1    MG816464    AYA93248.1    KJ461920    AHW45922.1    KQ460891    KPJ10838.1    KJ461916    AHW45918.1    AGBW02008361    OWR53574.1    KQ459460    KPJ00669.1    AGBW02011158    OWR47131.1    HQ219475    ADX96000.1    AGBW02012988    OWR44131.1    KQ460126    KPJ17594.1    DQ063591    AAZ14792.1    KX958479    ASQ43195.1    KP843906    AKS40085.1    AB195971    BAD74196.1    FJ602780    ACM24346.1    KU096844    AMY63177.1    KZ150055    PZC74338.1    KPJ10837.1    BABH01025846    AF315318    AAG30945.2    ODYU01012514    SOQ58867.1    NWSH01002265    PCG68757.1    HM046617    ADK55524.1    KJ461917    AHW45919.1    KX958476    ASQ43192.1    NWSH01001148    PCG72391.1    JX491641    KC710020    AB244517    AGC23337.1    AGM90553.1    BAE94664.1    AK402622    BAM19244.1    NWSH01003339    PCG66520.1    PCG66521.1    HQ647012    AET10424.1    AY829748    AAV91362.1    KPJ10841.1    AB195970    BAD74195.1    KX845559    ATB54990.1    PZC74333.1    KJ461921    AHW45923.1    KP843896    AKS40075.1    AY829747    AY829775    AAV91361.1    AAV91389.1    FJ602788    ACM24354.1    JQ708200    AFQ02692.1    AGBW02008280    OWR53838.1    KM217077    KM217078    AJA32865.1    AB251898    BAF03558.1    KM217079    AJA32867.1    KPJ00666.1    KM217080    AJA32868.1    AGBW02014566    OWR41396.1    DQ336356    ABC68342.2    KM881570    AJQ22645.1    AF315317    AF315319    FJ602772    AAG30944.1    AAG30946.1    ACM24338.1    HM046615    ADK55522.1    ODYU01005718    SOQ46845.1    GAIX01009047    JAA83513.1    KR137569    ALI87024.1    RSAL01000012    RVE53492.1    SOQ46842.1    JTDY01014370    KOB52036.1    KJ461913    AHW45915.1    EU668902    ACD01216.1    KX845562    ATB54993.1    PZC74337.1    KX977584    ATN45243.1    KX977585    ATN45244.1    PCG68755.1    MF067296    ASM61894.1    KC710018    KC710022    AGM90551.1    AGM90555.1    JTDY01002160    KOB71979.1    KC710019    KC710024    AGM90552.1    AGM90557.1    RVE53491.1    HM046613    ADK55520.1    GDQN01008714    JAT82340.1    KPJ00670.1    U94328    AAC36146.1    SOQ46844.1    OWR41397.1    NWSH01000548    PCG75721.1    GAIX01014246    JAA78314.1    KZ150027    PZC74790.1    PCG75724.1    KC689795    KX845561    AGQ42773.1    ATB54992.1    PZC74791.1    ODYU01008627    SOQ52368.1    PCG72390.1    MH042022    AXJ21597.1    HM046614    ADK55521.1    KX958480    ASQ43196.1    KQ459597    KPI95180.1    KF251046    AGY56063.1    BABH01035507    HQ219476    ADX96001.1    AB195973    BAD74198.1    DQ063589    AAZ14790.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000007151    UP000053268    UP000283053    + More
UP000053240   

PRIDE

H9J540    Q5R1P6    B9VTS0    Q9GSB6    Q5R1P7    B9VTS8    + More
Q9GN07    H9J4S5    Q5R1P4   

Pfam

PF00011   HSP20

Interpro

IPR001436   Alpha-crystallin/HSP        + More
IPR002068   A-crystallin/Hsp20_dom       
IPR008978   HSP20-like_chaperone       
IPR036116   FN3_sf       
IPR003961   FN3_dom       

SUPFAM

SSF49764   SSF49764        + More
SSF49265   SSF49265       

Gene 3D

2.60.40.790    

CDD

cd00063  FN3

ProteinModelPortal

H9J540   A0A2W1BH28   A0A2A4K9P8   A0A2H1WKW0   A0A0L7L8L1   F1C930   + More
A0A222NUK4   A0A0K0XR51   A0A212FBC6   A0A2H4G806   A0A194QKZ3   A0A220W0C8   A0A3S2L9M7   A0A385PHG6   A0A0A7BZ27   A0A0N1PFQ5   A0A0A7BZF0   A0A212FIM4   A0A194Q5N9   A0A212F0A4   F1C928   A0A212ERQ7   A0A0N1PIZ2   Q1AMF5   A0A222NUL2   A0A0K0XQY0   Q5R1P6   B9VTS0   A0A161GJ22   A0A2W1BHM1   A0A0N1INR0   Q9GSB6   A0A2H1X0S0   A0A2A4J9F7   E2F3A1   A0A0A7BZM3   A0A222NUK8   A0A2A4JK93   Q1HAT5   I4DMV4   A0A2A4J3F8   R4HL93   Q5MGN8   A0A0N0PBJ9   Q5R1P7   A0A2H4LI82   A0A0A7BZF3   A0A0K0XQX1   Q5MGL1   B9VTS8   M1FKQ7   A0A212FJB9   A0A0A7RE39   Q0KKB1   A0A0A7RCH5   A0A194QB65   A0A0A7RCE5   A0A212EIS5   Q2LCS7   A0A0C5PKY8   Q9GN07   E2F399   A0A2H1W170   S4P4G2   A0A0P0CJ81   A0A3S2PJT0   A0A2H1W1Y8   A0A0L7K2K7   A0A0A7BZ70   B2ZHW3   A0A2H4LHL7   A0A2D1CRQ9   A0A2D1CRP7   A0A2A4J9J4   A0A343EU23   R9S0D1   A0A0L7L9D3   R9RZX9   E2F397   A0A1E1W5U5   A0A194Q6N8   O18634   A0A2H1W2W7   A0A212EIS8   A0A2A4JUN7   S4NMP5   A0A2W1BPZ5   A0A2A4JVR5   A0A075BR54   A0A2H1WH29   A0A2A4JLW2   A0A345W859   E2F398   A0A222NUL6   A0A194PVM7   U5QB76   H9J4S5   F1C929   Q5R1P4   Q1AMF7  

PDB

3J07     E-value=1.75514e-23,     Score=266

KEGG

101743710    K09542 crystallin, alpha B | (RefSeq) protein lethal(2)essential for life-like

GO

GO:0046872   GO:0005840   GO:0016021  

Length:

188

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0002

Exp number, first 60 AAs:

0.0002

Total prob of N-in:

0.04246

outside

1  -  188

 

 

Pi

71.586351

Theta

154.13649

Tajima's D

-1.564231

CLR

293.723357

CSRT

0.0513974301284936

Interpretation

Uncertain