Gene

KWMTBOMO16077

Pre Gene Modal

BGIBMGA004574

Annotation

PREDICTED:_solute_carrier_family_12_member_9_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr27(-):8424302-8444340      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.642

CDS

ATGATTGATACTTTTTTTGTACCCCAGCTGAAAGAAGTGGATGTTGACGAGTCAGGTTATTTAGTAGGTAATGCCGGTCTTCTGGTGACATTAGCGCAATTCGCCGTGGCGTACCTCATAGTGCTGTTCACGGTGACCTCAATATGTGCGATATCGACAAACGGGGCGGTCGAAGGAGGCGGCGTGTATTTCATGTTGAGCAGAACCCTAGGTCCCGAATTCGGAGGTGCAATAGGGACGTTGTTCTTCTTCGCGAATGTGGTGTCCAGTGCTTTGTGCATATCAGCGTGCACTGAGGCCTTGGTTGAAAACTTCGGAACCAATGGGTACTTAGTGGGTGAGAGTGGTGGTATCCCGGACAGCTGGTGGTACCGCTTCCTGTATCGCTCCGTGCTGAATGCGGTCGGGCTGGGTGTGTCCCTCGCGGGCGCCTCGCTGTTCGCCAGGACCAGCCTCGCCATCTGGGTCACGATGCTGGTCTGCTTAGCCAGCGCCTTCTTGAGCTTCTTCATCACGAGTCCTGCGCAGATCGAGAAGCCAGATTCGAATCACTTAATAAACACGACGTATCTGAACTACACCGGGCTGAGCGTGTCGACGCTGGCTTCGAACATGTACCCGCAGTACGGGCGCGACTACACAACGGCGAGCGGGCAGCTCGTGGACTTCGCGTCGGTGCTGGGCGTGCTGTTCACCGGCGTCACCGGCGTCATGGCCGGCGCCAACATGAGCGGGGAGTTGAAGCACCCGTCGCGCAGTATCCCGCGCGGCACGCTCGCGGCGCTGCTGTTCACGGCCGCGTCCTACGCCGCGCTGAGCCTGCTGACCGCGGCCACGTGCTCCAGGGAGCTGCTGCAGAACAACTACGTGTACCTGCTGCCCATCAACGTGTGGCCACCCTTCATAGCCGTCGGTATGATAGTAGCTACATTTTCGGCCGCACTCTCCAACCTGATCGGCGCTTCTAGAGTGTTGGAAGCGTTGGCCAAAGATGACATATTTGGTTTCCTTCTTCGTCCGATGGTGTCGCGTTCCGGGAACCCTGTGCTGGCGGTGGTGGTGTCCTGGGCGCTGGTGCAGGTGGGCGTGGCGGCGGACTCCCTCAACGCCATAGCGCAAGTCAACTCGGTCCTCTTCATGACGAGCTATTTCGCCATCAATCTGGCTTGCTTGGGACTGGAGCTCGCTTCGGCTCCTAACTTCAGGCCGACGTTCCGTCAGTTCTCGTGGGCGACGTCGCTGGCGGGGCTGTGCGGCAGCGCGGCGCTGATGTTCTCGCTGCGCGCGCTGTACGCGGCGGGCGGCGCGCTGGCGGCCGCGGGGCTGGTGCTGGCGCTGCACCTGCTGTCGCCCGCCGCCGCCGAGCCCAAGTGGGGCAGCCTCAGCCAGGCGCTCATCTTCCACCAGGTCCGCAAGTACCTGCTGCTTCTGGACCCGCGGCGGGAGCACGTCAAGTTCTGGCGGCCGCAGATGCTGCTGCTGGTAGCCTCGCCGAGACAGTCCGCGCCGCTCATAGACTTCGTCAACGACCAGAAGAAGGGCGGGCTGTTCGTGCTGGGCCACGTGCGCGTGGGGCGGCTGGACGGCGCAGGGGACCCGCTCGCGGAGGAGCACCAGTACTGGCTGAAGCTCATCGACCATCTCAAGGTGAAGGCGTTCGTGGAGCTGTGCCTGGCGGAGTCGGTGCGCAGCGGCGCCGCCCACCTGGCGCGCCTGTCCGGTCTGGGCGCCATGAAGCCCGACACCGTGATGCTCGGCTTCTGGGACGACGCGCAGCCGCGGGACTTCTTCAGGGAACCGGAGTCGCCGTACCGCACGGAGCTGTTCGACGCGGGCGGCGGCGCCTTCCCCGCCCGCCGCGCCGGCGCCGCGCGCCTGCCGCCCGCCGAGTACGTGCGCATACTGTCCGACGTGCTCTGCGTCAACAAGAACGTGTGCATATGCAGGCACTTCCATCTGCTGGATATGGCGGCGGTCGAACGTAAGTCCCCGAGGTTGAAGTACATCGACGTGTGGCTGGTGGATCTGCTGGCGCCGAGCCGCGAGGAGGCGTTCTCGGTGCGGGGGCTGTTCGCGCTGCAGCTGGCGGCCGTGGTGCGGTCCGCGCGCGGCTGGCAACACCTGCAACTCCGCGTGCACACCACCAGACACGCAAGCCTGACCGTGGGCTCCGGCGACAGTCCGGCGCCGGACGGGCCGCCGCTGCAGCAGCGCCTCGAGGAGCTCCTAAAGCTGCTGCGGATCAATGCCACTACGCACATCATCTCAGATTGGCCGAAGCTGGACCTGAGCAGGTGGTCCGATACGGACGAGGACCTGTACCAGCGGGTCCCCGCCACCTACCTCAAGACCGTGAACAGTATAGTCCGGGAGCGCTGCGAGCAGGGCACCGCCGTGACCTTCGTCCAGCTTAGCGCCCCGCCCCGCGAGGCCGACGAGCTGTGCGAGCAGTACCTGCAGGTGCTGGACGAATTCACGAAGGATTTATCGCCGACGATTCTAGTGAGGGGCTTAAAGTCGGTCACGTCCACGTCTCTGTAA

Protein

MIDTFFVPQLKEVDVDESGYLVGNAGLLVTLAQFAVAYLIVLFTVTSICAISTNGAVEGGGVYFMLSRTLGPEFGGAIGTLFFFANVVSSALCISACTEALVENFGTNGYLVGESGGIPDSWWYRFLYRSVLNAVGLGVSLAGASLFARTSLAIWVTMLVCLASAFLSFFITSPAQIEKPDSNHLINTTYLNYTGLSVSTLASNMYPQYGRDYTTASGQLVDFASVLGVLFTGVTGVMAGANMSGELKHPSRSIPRGTLAALLFTAASYAALSLLTAATCSRELLQNNYVYLLPINVWPPFIAVGMIVATFSAALSNLIGASRVLEALAKDDIFGFLLRPMVSRSGNPVLAVVVSWALVQVGVAADSLNAIAQVNSVLFMTSYFAINLACLGLELASAPNFRPTFRQFSWATSLAGLCGSAALMFSLRALYAAGGALAAAGLVLALHLLSPAAAEPKWGSLSQALIFHQVRKYLLLLDPRREHVKFWRPQMLLLVASPRQSAPLIDFVNDQKKGGLFVLGHVRVGRLDGAGDPLAEEHQYWLKLIDHLKVKAFVELCLAESVRSGAAHLARLSGLGAMKPDTVMLGFWDDAQPRDFFREPESPYRTELFDAGGGAFPARRAGAARLPPAEYVRILSDVLCVNKNVCICRHFHLLDMAAVERKSPRLKYIDVWLVDLLAPSREEAFSVRGLFALQLAAVVRSARGWQHLQLRVHTTRHASLTVGSGDSPAPDGPPLQQRLEELLKLLRINATTHIISDWPKLDLSRWSDTDEDLYQRVPATYLKTVNSIVRERCEQGTAVTFVQLSAPPREADELCEQYLQVLDEFTKDLSPTILVRGLKSVTSTSL

Cofactor

Mn(2+)

Similarity

Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily.

Uniprot

A0A2W1B7E2   A0A1E1W9H6   A0A026X0M0   E2BRE5   E2AV35   A0A195FJ83   + More
F4WUB9   A0A195C7H7   A0A151J6F0   A0A310SFS2   A0A087ZXW7   A0A154P0U6   A0A0J7KYF9   A0A151I4T2   A0A2A3EB55   A0A023EW80   A0A182H5M6   Q16K72   A0A1S4FYI0   W8AP20   A0A0K8UF73   A0A084W5J7   A0A2J7RFJ2   A0A182QR84   A0A182MUA1   A0A182YHG0   A0A182K2J1   A0A1A9XDN1   A0A067RLG4   A0A1Q3FDF0   A0A1Q3FCX5   A0A1Q3FDH9   A0A1I8NU70   A0A182N8T8   A0A1Q3FDK6   B0XBU1   Q7Q0N1   A0A182JCB5   A0A2M3ZF02   A0A0L0CHT8   A0A2M4BCI2   A0A2M4BCL8   W5JVY1   A0A1L8DF00   A0A2M4A833   A0A2M4A887   A0A182FMY1   U5ENZ6   A0A182VSV1   A0A0A9W9C4   A0A1B0DF86   A0A146M6A1   A0A1W4XW25   A0A0M8ZUT7   A0A1A9W0D8   D6WJT4   A0A182RAC2   A0A182X7B0   A0A182KJV3   A0A182I0T6   A0A1I8N2L1   A0A0C9RBD0   A0A182VNW4   A0A1W4V9S5   A0A0V0G4G4   A0A069DZM1   A0A182PK75   A0A224XJG4   A0A2S2PQA5   A0A0J9R419   Q9VJ75   A0A0K8W3V6   A0A0K8U9Y9   A0A2S2Q248   B4P9V3   B3NLC5   A0A2H8TGP2   A0A1J1HZ59   B4I5H9   Q16K71   E0VL18   Q29MP1   B4KK24   J9JR18   A0A0M4E5U5   A0A3B0K6A6   B4LTJ4   A0A1Y1K8K4   B3MM29   A0A336LS50   B4JDM5   B4MZF7   A0A0K8SW94   A0A2M3ZKU9   A0A1B0CEI6   A0A1D2NK86   A0A1Q3FDH2   A0A1Q3FDC1  

Pubmed

28756777    24508170    30249741    20798317    21719571    24945155    + More
26483478    17519023    17510324    24495485    24438588    25244985    24845553    12364791    14747013    17210077    26108605    20920257    23761445    25401762    26823975    18362917    19820115    20966253    25315136    26334808    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17994087    17550304    20566863    15632085    28004739    27289101   

EMBL

KZ150249    PZC71839.1    GDQN01007431    JAT83623.1    KK107054    QOIP01000004    + More
EZA61551.1    RLU23582.1    GL449962    EFN81723.1    GL443013    EFN62702.1    KQ981522    KYN40720.1    GL888355    EGI62227.1    KQ978143    KYM96797.1    KQ979854    KYN18797.1    KQ761729    OAD57161.1    KQ434796    KZC05559.1    LBMM01002020    KMQ95381.1    KQ976445    KYM86103.1    KZ288308    PBC28704.1    GAPW01000138    JAC13460.1    JXUM01112102    KQ565562    KXJ70879.1    EF173370    CH477974    ABM68597.1    EAT34694.1    GAMC01018793    GAMC01018791    JAB87762.1    GDHF01027098    JAI25216.1    ATLV01020668    KE525304    KFB45491.1    NEVH01004413    PNF39599.1    AXCN02001866    AXCM01000224    KK852439    KDR23883.1    GFDL01009475    JAV25570.1    GFDL01009611    JAV25434.1    GFDL01009438    JAV25607.1    GFDL01009399    JAV25646.1    DS232653    EDS44470.1    AAAB01008980    EAA13952.3    GGFM01006338    MBW27089.1    JRES01000359    KNC31953.1    GGFJ01001614    MBW50755.1    GGFJ01001629    MBW50770.1    ADMH02000247    ETN67250.1    GFDF01009154    JAV04930.1    GGFK01003618    MBW36939.1    GGFK01003629    MBW36950.1    GANO01000381    JAB59490.1    GBHO01042149    JAG01455.1    AJVK01058606    GDHC01003346    JAQ15283.1    KQ435834    KOX71575.1    KQ971343    EFA04772.2    APCN01005264    GBYB01012684    GBYB01012688    GBYB01013779    JAG82451.1    JAG82455.1    JAG83546.1    GECL01003192    JAP02932.1    GBGD01000400    JAC88489.1    GFTR01008255    JAW08171.1    GGMR01019033    MBY31652.1    CM002910    KMY90838.1    AE014134    AY047570    AAF53679.1    AAK77302.1    GDHF01006592    JAI45722.1    GDHF01028916    JAI23398.1    GGMS01002654    MBY71857.1    CM000158    EDW90294.1    CH954179    EDV54775.1    GFXV01001460    MBW13265.1    CVRI01000037    CRK93243.1    CH480822    EDW55635.1    EAT34695.1    DS235263    EEB14074.1    CH379060    EAL33652.1    CH933807    EDW11542.1    ABLF02027289    CP012523    ALC39558.1    OUUW01000004    SPP78998.1    CH940649    EDW64967.1    GEZM01089085    JAV57724.1    CH902620    EDV30844.1    UFQT01000144    SSX20842.1    CH916368    EDW03395.1    CH963920    EDW77742.1    GBRD01008656    JAG57165.1    GGFM01008374    MBW29125.1    AJWK01008903    AJWK01008904    AJWK01008905    LJIJ01000021    ODN05525.1    GFDL01009431    JAV25614.1    GFDL01009526    JAV25519.1   

Proteomes

UP000053097    UP000279307    UP000008237    UP000000311    UP000078541    UP000007755    + More
UP000078542    UP000078492    UP000005203    UP000076502    UP000036403    UP000078540    UP000242457    UP000069940    UP000249989    UP000008820    UP000030765    UP000235965    UP000075886    UP000075883    UP000076408    UP000075881    UP000092443    UP000027135    UP000095300    UP000075884    UP000002320    UP000007062    UP000075880    UP000037069    UP000000673    UP000069272    UP000075920    UP000092462    UP000192223    UP000053105    UP000091820    UP000007266    UP000075900    UP000076407    UP000075882    UP000075840    UP000095301    UP000075903    UP000192221    UP000075885    UP000000803    UP000002282    UP000008711    UP000183832    UP000001292    UP000009046    UP000001819    UP000009192    UP000007819    UP000092553    UP000268350    UP000008792    UP000007801    UP000001070    UP000007798    UP000092461    UP000094527   

PRIDE

Q9VJ75   

Pfam

PF03522   SLC12        + More
PF00324   AA_permease
PF05186   Dpy-30
PF06957   COPI_C
PF00400   WD40
PF04053   Coatomer_WDAD
PF00248   Aldo_ket_red
PF00652   Ricin_B_lectin
PF00535   Glycos_transf_2

Interpro

IPR018491   SLC12_C        + More
IPR004841   AA-permease/SLC12A_dom       
IPR007858   Dpy-30_motif       
IPR020472   G-protein_beta_WD-40_rep       
IPR019775   WD40_repeat_CS       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR018170   Aldo/ket_reductase_CS       
IPR001680   WD40_repeat       
IPR006692   Coatomer_WD-assoc_reg       
IPR023210   NADP_OxRdtase_dom       
IPR010714   Coatomer_asu_C       
IPR036322   WD40_repeat_dom_sf       
IPR036812   NADP_OxRdtase_dom_sf       
IPR017986   WD40_repeat_dom       
IPR020471   Aldo/keto_reductase       
IPR001173   Glyco_trans_2-like       
IPR000772   Ricin_B_lectin       
IPR035992   Ricin_B-like_lectins       
IPR029044   Nucleotide-diphossugar_trans       

SUPFAM

SSF50978   SSF50978        + More
SSF51430   SSF51430       
SSF50370   SSF50370       
SSF53448   SSF53448       

Gene 3D

2.130.10.10     3.20.20.100     3.90.550.10    

CDD

cd06660  Aldo_ket_red
cd00161  RICIN

ProteinModelPortal

A0A2W1B7E2   A0A1E1W9H6   A0A026X0M0   E2BRE5   E2AV35   A0A195FJ83   + More
F4WUB9   A0A195C7H7   A0A151J6F0   A0A310SFS2   A0A087ZXW7   A0A154P0U6   A0A0J7KYF9   A0A151I4T2   A0A2A3EB55   A0A023EW80   A0A182H5M6   Q16K72   A0A1S4FYI0   W8AP20   A0A0K8UF73   A0A084W5J7   A0A2J7RFJ2   A0A182QR84   A0A182MUA1   A0A182YHG0   A0A182K2J1   A0A1A9XDN1   A0A067RLG4   A0A1Q3FDF0   A0A1Q3FCX5   A0A1Q3FDH9   A0A1I8NU70   A0A182N8T8   A0A1Q3FDK6   B0XBU1   Q7Q0N1   A0A182JCB5   A0A2M3ZF02   A0A0L0CHT8   A0A2M4BCI2   A0A2M4BCL8   W5JVY1   A0A1L8DF00   A0A2M4A833   A0A2M4A887   A0A182FMY1   U5ENZ6   A0A182VSV1   A0A0A9W9C4   A0A1B0DF86   A0A146M6A1   A0A1W4XW25   A0A0M8ZUT7   A0A1A9W0D8   D6WJT4   A0A182RAC2   A0A182X7B0   A0A182KJV3   A0A182I0T6   A0A1I8N2L1   A0A0C9RBD0   A0A182VNW4   A0A1W4V9S5   A0A0V0G4G4   A0A069DZM1   A0A182PK75   A0A224XJG4   A0A2S2PQA5   A0A0J9R419   Q9VJ75   A0A0K8W3V6   A0A0K8U9Y9   A0A2S2Q248   B4P9V3   B3NLC5   A0A2H8TGP2   A0A1J1HZ59   B4I5H9   Q16K71   E0VL18   Q29MP1   B4KK24   J9JR18   A0A0M4E5U5   A0A3B0K6A6   B4LTJ4   A0A1Y1K8K4   B3MM29   A0A336LS50   B4JDM5   B4MZF7   A0A0K8SW94   A0A2M3ZKU9   A0A1B0CEI6   A0A1D2NK86   A0A1Q3FDH2   A0A1Q3FDC1  

KEGG

101745558    K14429 solute carrier family 12 (potassium/chloride transporters), member 9 | (RefSeq) solute carrie

GO

GO:0016021   GO:0055085   GO:0006811   GO:0005215   GO:1902476   GO:0005623   GO:0015379   GO:0055064   GO:0006884   GO:0055075   GO:1990573   GO:0005198   GO:0016192   GO:0016491   GO:0006886   GO:0030126   GO:0030246   GO:0016757   GO:0006486   GO:0005794   GO:0016020   GO:0006810   GO:0022857   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259  

Length:

846

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

245.5721

Exp number, first 60 AAs:

25.75424

Total prob of N-in:

0.33718

POSSIBLE N-term signal

sequence

outside

1  -  19

TMhelix

20  -  42

inside

43  -  73

TMhelix

74  -  96

outside

97  -  125

TMhelix

126  -  148

inside

149  -  152

TMhelix

153  -  175

outside

176  -  184

TMhelix

185  -  207

inside

208  -  219

TMhelix

220  -  242

outside

243  -  256

TMhelix

257  -  276

inside

277  -  288

TMhelix

289  -  311

outside

312  -  348

TMhelix

349  -  371

inside

372  -  375

TMhelix

376  -  398

outside

399  -  407

TMhelix

408  -  427

inside

428  -  428

TMhelix

429  -  451

outside

452  -  846

 

 

Pi

326.027348

Theta

159.31821

Tajima's D

3.497042

CLR

0.257665

CSRT

0.994550272486376

Interpretation

Uncertain