Gene

KWMTBOMO16075

Pre Gene Modal

BGIBMGA004576

Annotation

Uncharacterized_protein_OBRU01_19530?_partial_[Operophtera_brumata]

Location

Bomo_Chr27(-):8225243-8227194      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.336 Mitochondrial   Reliability : 1.606

CDS

ATGCGATGGGGAGTAAGAGATGAGGCCACAGACGATCATATGACCACAGAGCTGTGTATGAGAGAGATCAAGAACTGCCAGAGGCTATCAATGGGGCCTAATTTTGTCGTTTTTCTGGGTCAAAAATATGGCTACAGGCCAATACCTACTTACGTCCTGTCGTCAGAGCTACAGATGTTAAGAGAGGAGCTAGCAGCTGGTGGTGTGGACGTCATACTTCTAGACACTTGGTACAAAAAGGATTCGAATGCTGTTCCCCCTATATCAGTTCTTCAGCCTATTTCATCTATATTGATTAACTTCAATAATAAGAGGGTACCCAAACTCCAAGCTGAAGATCAAGCAATCTGGTGGGACACTCTTGGAAAGATGCAGAAGCTTTTCCGGAAAGCTTCATTGCAATTGTACAACGCCGGAAAAATCGATAAAGACACAATGCACAATTACTTCATGTCTGGTTAG

Protein

MRWGVRDEATDDHMTTELCMREIKNCQRLSMGPNFVVFLGQKYGYRPIPTYVLSSELQMLREELAAGGVDVILLDTWYKKDSNAVPPISVLQPISSILINFNNKRVPKLQAEDQAIWWDTLGKMQKLFRKASLQLYNAGKIDKDTMHNYFMSG

Uniprot

H9J4Y6   A0A0L7KWT5   A0A2A4JCC0   A0A2W1BJX8   A0A0N1IE15   A0A3S2TKP3   + More
A0A212F853   A0A2P8YJ33   A0A182S8Q7   A0A182TQR7   D2A4Y1   T1I544   E0VJC5   A0A067QH37   A0A1B0DBQ4   A0A182WDI4   A0A182JNC1   A0A1Q3FSW4   W5J7I9   A0A182N2C0   A0A182FKK4   A0A182X5M2   A0A182LYL0   A0A182RTD4   Q7QHF1   A0A182U632   A0A182L3H2   A0A182HWC7   A0A084VHT9   A0A182J713   B0WL71   A0A182VE12   A0A182YB27   A0A182QN31   A0A182NZL9   Q0IFD7   A0A0N0U7I8   A0A088AR94   A0A1I8N5Z0   A0A182G340   K7JQM8   A0A2A3ED85   A0A1I8NYT7   A0A1I8NYU7   E2AUX2   A0A336MEJ1   A0A151XF31   F4WAY8   A0A158NRE9   A0A195BFH5   A0A151JBR8   A0A151IFS8   A0A1A9X452   A0A0L0BP11   A0A3L8DKH5   A0A195FJX0   A0A026WF60   A0A1B0BF52   A0A1A9X8M2   A0A1A9ZY44   A0A1B0GDT5   A0A0L7RCH5   A0A1A9V657   A0A1W4XMN4   A0A1B0CWF8   B4KAF4   B4NL15   B4LY14   A0A0M4EGP6   A0A3B0JTE2   B3MXB4   B4JGA1   A0A0R3NQ94   B4GML1   Q294U8   A0A2S2PDS7   A0A0P6H794   A0A0P5PYI5   A0A0P5QE52   A0A0P5V2T4   A0A0P4XWA2   A0A0N8BN08   A0A0N8D6F9   B4QXQ8   A0A0P5QKR9   B4PR45   A0A1W4VEG6   Q9VEZ2   A0A0P5S4L2   B3P0X9   B4HLE3   A0A0P4Z3M2   A0A0N8CD67   A0A0N8CJR6   E2BLG4   J9JUM0   A0A226DA16   A0A232F7U5   A0A162R3C6   A0A0P6A0G0  

Pubmed

19121390    26227816    28756777    26354079    22118469    29403074    + More
18362917    19820115    20566863    24845553    20920257    23761445    12364791    14747013    17210077    20966253    24438588    25244985    17510324    25315136    26483478    20075255    20798317    21719571    21347285    26108605    30249741    24508170    17994087    15632085    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    28648823   

EMBL

BABH01025676    BABH01025677    JTDY01004831    KOB67697.1    NWSH01001908    PCG69725.1    + More
KZ149997    PZC75382.1    KQ458842    KPJ04911.1    RSAL01000078    RVE48741.1    AGBW02009801    OWR49898.1    PYGN01000560    PSN44258.1    KQ971345    EFA05162.2    ACPB03010524    DS235222    EEB13481.1    KK853768    KDQ84119.1    AJVK01030187    GFDL01004390    JAV30655.1    ADMH02002090    ETN59363.1    AXCM01001359    AAAB01008816    EAA05136.3    APCN01001484    ATLV01013235    KE524847    KFB37533.1    DS231980    EDS30244.1    AXCN02001729    CH477356    EAT42778.1    KQ435711    KOX79674.1    JXUM01140736    JXUM01140737    JXUM01140738    JXUM01140739    KQ569115    KXJ68757.1    KZ288289    PBC29252.1    GL442898    EFN62780.1    UFQT01001083    SSX28802.1    KQ982205    KYQ58996.1    GL888056    EGI68608.1    ADTU01023849    KQ976504    KYM82920.1    KQ979122    KYN22530.1    KQ977771    KYM99979.1    JRES01001582    KNC21746.1    QOIP01000007    RLU20944.1    KQ981522    KYN40557.1    KK107238    EZA54682.1    JXJN01013283    JXJN01013284    JXJN01013285    CCAG010012025    KQ414615    KOC68524.1    AJWK01032340    AJWK01032341    AJWK01032342    AJWK01032343    AJWK01032344    AJWK01032345    CH933806    EDW15667.1    CH964272    EDW84218.1    CH940650    EDW66880.1    CP012526    ALC45346.1    OUUW01000008    SPP83672.1    CH902629    EDV35337.1    CH916369    EDV92570.1    CM000070    KRT01136.1    CH479185    EDW38085.1    EAL28866.2    GGMR01014988    MBY27607.1    GDIQ01045141    JAN49596.1    GDIQ01122408    GDIQ01074175    JAL29318.1    GDIQ01136757    JAL14969.1    GDIP01105617    JAL98097.1    GDIP01235906    JAI87495.1    GDIQ01161795    JAK89930.1    GDIP01064175    JAM39540.1    CM000364    EDX12732.1    GDIQ01112861    JAL38865.1    CM000160    EDW97367.1    AE014297    AAF55270.1    GDIQ01098866    JAL52860.1    CH954181    EDV49098.1    CH480815    EDW41963.1    GDIP01219962    JAJ03440.1    GDIQ01091323    JAL60403.1    GDIP01124919    JAL78795.1    GL449017    EFN83516.1    ABLF02037162    LNIX01000028    OXA41694.1    NNAY01000701    OXU26911.1    LRGB01000243    KZS20194.1    GDIP01037234    JAM66481.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053268    UP000283053    UP000007151    + More
UP000245037    UP000075901    UP000075902    UP000007266    UP000015103    UP000009046    UP000027135    UP000092462    UP000075920    UP000075881    UP000000673    UP000075884    UP000069272    UP000076407    UP000075883    UP000075900    UP000007062    UP000075882    UP000075840    UP000030765    UP000075880    UP000002320    UP000075903    UP000076408    UP000075886    UP000075885    UP000008820    UP000053105    UP000005203    UP000095301    UP000069940    UP000249989    UP000002358    UP000242457    UP000095300    UP000000311    UP000075809    UP000007755    UP000005205    UP000078540    UP000078492    UP000078542    UP000091820    UP000037069    UP000279307    UP000078541    UP000053097    UP000092460    UP000092443    UP000092445    UP000092444    UP000053825    UP000078200    UP000192223    UP000092461    UP000009192    UP000007798    UP000008792    UP000092553    UP000268350    UP000007801    UP000001070    UP000001819    UP000008744    UP000000304    UP000002282    UP000192221    UP000000803    UP000008711    UP000001292    UP000008237    UP000007819    UP000198287    UP000215335    UP000076858   

PRIDE

H9J4Y6    Q9VEZ2   

Pfam

PF05729   NACHT        + More
PF00400   WD40
PF13271   DUF4062
PF13191   AAA_16

Interpro

IPR019775   WD40_repeat_CS        + More
IPR027417   P-loop_NTPase       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR007111   NACHT_NTPase       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR036322   WD40_repeat_dom_sf       
IPR011048   Haem_d1_sf       
IPR025139   DUF4062       
IPR041664   AAA_16       
IPR011044   Quino_amine_DH_bsu       

SUPFAM

SSF50998   SSF50998        + More
SSF52540   SSF52540       
SSF50978   SSF50978       
SSF51004   SSF51004       
SSF50969   SSF50969       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9J4Y6   A0A0L7KWT5   A0A2A4JCC0   A0A2W1BJX8   A0A0N1IE15   A0A3S2TKP3   + More
A0A212F853   A0A2P8YJ33   A0A182S8Q7   A0A182TQR7   D2A4Y1   T1I544   E0VJC5   A0A067QH37   A0A1B0DBQ4   A0A182WDI4   A0A182JNC1   A0A1Q3FSW4   W5J7I9   A0A182N2C0   A0A182FKK4   A0A182X5M2   A0A182LYL0   A0A182RTD4   Q7QHF1   A0A182U632   A0A182L3H2   A0A182HWC7   A0A084VHT9   A0A182J713   B0WL71   A0A182VE12   A0A182YB27   A0A182QN31   A0A182NZL9   Q0IFD7   A0A0N0U7I8   A0A088AR94   A0A1I8N5Z0   A0A182G340   K7JQM8   A0A2A3ED85   A0A1I8NYT7   A0A1I8NYU7   E2AUX2   A0A336MEJ1   A0A151XF31   F4WAY8   A0A158NRE9   A0A195BFH5   A0A151JBR8   A0A151IFS8   A0A1A9X452   A0A0L0BP11   A0A3L8DKH5   A0A195FJX0   A0A026WF60   A0A1B0BF52   A0A1A9X8M2   A0A1A9ZY44   A0A1B0GDT5   A0A0L7RCH5   A0A1A9V657   A0A1W4XMN4   A0A1B0CWF8   B4KAF4   B4NL15   B4LY14   A0A0M4EGP6   A0A3B0JTE2   B3MXB4   B4JGA1   A0A0R3NQ94   B4GML1   Q294U8   A0A2S2PDS7   A0A0P6H794   A0A0P5PYI5   A0A0P5QE52   A0A0P5V2T4   A0A0P4XWA2   A0A0N8BN08   A0A0N8D6F9   B4QXQ8   A0A0P5QKR9   B4PR45   A0A1W4VEG6   Q9VEZ2   A0A0P5S4L2   B3P0X9   B4HLE3   A0A0P4Z3M2   A0A0N8CD67   A0A0N8CJR6   E2BLG4   J9JUM0   A0A226DA16   A0A232F7U5   A0A162R3C6   A0A0P6A0G0  

KEGG

101745707    no KO assigned | (RefSeq) NACHT and WD repeat domain-containing protein 2

GO

GO:0097344   GO:0006364   GO:0005656   GO:0030174  

Length:

153

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.08328

Exp number, first 60 AAs:

0.02879

Total prob of N-in:

0.37822

outside

1  -  153

 

 

Pi

159.462349

Theta

112.081352

Tajima's D

1.329183

CLR

0.02789

CSRT

0.748212589370531

Interpretation

Uncertain