Gene

KWMTBOMO16074

Pre Gene Modal

BGIBMGA004576

Annotation

PREDICTED:_NACHT_and_WD_repeat_domain-containing_protein_2_[Papilio_xuthus]

Location

Bomo_Chr27(-):8211385-8222684      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.854

CDS

ATGAATAAGAAATCTCCATTGTATACTGTGGAATGGATCGGTCGAGACGGTCTAGATACAGAGACGCACAGCGAATATCTCAACCATTTCATTGCTCATTTTTATAAGAACATCATCAAATTGGTCGACAGGGCAATGCGTAAAGAAGACAGTAGCGCACAAGGTCAAATTGTAACAGAAATCCTGCAGCATTTACATGCTTGTAATAATTCTGTCAAAGTTTTTCATGGCAGAGAAGAAGATTTGAAATTCATCGAGGACTATATGAAAGACGCTTCCGATAAACCATTGGTTTTGTATGGTGAAGGCGGCTGCGGAAAGACCAGTTTACTAGCCAAGAGTTCCGCCATGTCCCTCGATACATGGTTCGCAGAGGCCCGTCCTACAAACATCATCAGATTCCTTGGAACTACACCTGATTCCAGCGCCTTAACTCCGACGCTTATCTCAATTTGTCAACAGATATCCTACAACTTTGCCCTTCCGTTCGAGAGCATCCCAGACGACCTCGTGCCCTTGACTGCTCATTTCAAACAGCTACTGACAATGGCAAGCCAGAACCAACCCCTACTACTCTTTTTAGATTCCGTTGATCAGCTAACTGGCATTGGCACAGAAAACAATAAAGTATCTTGGCTACCCACAAGATTGCCACCACACTGCAAGATAATTGTAACATGTGCGTGCGAAGAAGCTAATCCAGATGTGTCCAAAGAATATGACGTACTTCGGAGGATGATTGACTCAGAAGACAGCTTTTTAGAAGTCAAAGCTCTCGGCGAAGATCTAGCCATGCAAGTTCTGAAATTGTGGATGGCATCTGCAGCCAGAGATCTCACAAATTACCAGTGGCGTTTGGTTTCTAATGCCATTGGACAATGCTCTTTACCGATATTCGTGAAACTTGTTTTTGCAGAGGTCTGCAGATGGAGAAGCTACACCAAGCCTCAGGATACCCACCTCGCTTCTACAGTCATGGATTCGATTATGATGTTGTTTGAGAGGATCGAAAAACAGCATGGACGTCTACTGGTCTTTCACGCTTTGGCTTACATCACGGCAGCCCGCAGCGGTCTTTCCGAGACGGAACTTGAAGATCTCATATCGTTGGACGACAGAGTCTTGGACGACGTATACCAGTACCATTTGCCGCCTGTCAGGAGAATTCCTCCTCTGCTTTGGACTAGGATCCGTAACGATTTGCCTAACTACCTCTCTGAACGCGAAGCCGACGGTGTTTCCGTGATGAACTGGTACCACAGGCAGTTTCGTGACACAGCCCGCGAGAGATACTTCAAGAATATGAATATGGCGATGTACTTTCATTCTATGATTGCTGATTACTACCTCGGTATCTGGGGTGGTGGTGTACCAAAGCCGTTCAAGTATACAGAAATCCAGCGTCATCGGTTCAATCTTGCGGATAGGGAGGGTGTGGCTGACAGGAAGGTCCCACTTCAGCCTTTGGTCTTCATGTCAGCCGATGGAACATCCAAGAGATACAATTTACGAAAGTTTGGAGAATTGCCATTTCATCTAGTAAGATCGAAGCGATTCACCGATTTATACGCAGAAGTACTCTTCAACTACGAGTGGCTTCACGCGAAACTCAACTGCTGTCCTCTGCAAGCTGTCCTGGCTGATTTCGAAGATGCTAAGCTACATGTTAATAAAGACGCAGTGAGAGAATTAATGCTAGTAGCAGATGCTTTGCGTCTTGGTGGTGCTATTCTGGGTACATACCCTGATATGTTGGCGCCCCAATTGGTTGGAAGACTTTTGCCGGAGGCCCCTCATAATCCTGCTGTAGCGTCTCTGCTGAAACAATGTCACGATAAAGGAAAAAATCACTGCGCTTTACTGCCATCCCACCATTGCTTACACACCCCGGGCGGTCCTTTGAAGTATTCTTTAGAAGGTCACCAATTCGCTGTTTTCGCATTTCGCCTAAGCTCGGACAAACGCTACGTTGTGTCAATCTCTAGTAGGGTTATATCCTGGGACCTTTCCACTTCGGACCTGGCTCGAGATCTATGTCCACAATTGGAAGGTATTATGCAGAATCTGGAGCTCTCACCCGACAATAAATGGGCCGCTGCTTCAACGAATAACTCTGTCTCCATGTTGTTGAACATGCTGACCAGTGAATACGTGACCATTGATAATCCACTTGATGAAGGGGAAACAGTCCGAGGAGTTTTCGTCCTCAACCATCACATGATAATTTACGGTCCTCGCTCCTGGGTCCAGTACAGCATGAGAGGTGAACACGAGAAGACTATTCCTGCTCCCGATACCGCTCCGTATGATGACGTCGAATGGGAGATACTCTCAATGGAGTTTCGTGATTTGGAGAACTTCGTTCTGGTTATGTGGAGCGGGGATTTGGATGAAGATAGGTTGCTGGTGTTGTTCTGTAAGGAGGGGGCTTGGATGCGGCCTCTGAGATGCAGAGGTGCCATGGCTCTCAGCAAAAACTGGAACAAGATCTACTCTAGTGACCCTGATAGAGGATACCAGATATCAATTTACCAGCTCAATGACGAAGAAGGCTGTTGGGACAAAATCGAAGAGTTACATCATCGCGAGACGGACACCGCTGAAGCAATGCTCCAATTAAAACGCGGGAAAAAGGACAAAATGTTGCTTGGTTAG

Protein

MNKKSPLYTVEWIGRDGLDTETHSEYLNHFIAHFYKNIIKLVDRAMRKEDSSAQGQIVTEILQHLHACNNSVKVFHGREEDLKFIEDYMKDASDKPLVLYGEGGCGKTSLLAKSSAMSLDTWFAEARPTNIIRFLGTTPDSSALTPTLISICQQISYNFALPFESIPDDLVPLTAHFKQLLTMASQNQPLLLFLDSVDQLTGIGTENNKVSWLPTRLPPHCKIIVTCACEEANPDVSKEYDVLRRMIDSEDSFLEVKALGEDLAMQVLKLWMASAARDLTNYQWRLVSNAIGQCSLPIFVKLVFAEVCRWRSYTKPQDTHLASTVMDSIMMLFERIEKQHGRLLVFHALAYITAARSGLSETELEDLISLDDRVLDDVYQYHLPPVRRIPPLLWTRIRNDLPNYLSEREADGVSVMNWYHRQFRDTARERYFKNMNMAMYFHSMIADYYLGIWGGGVPKPFKYTEIQRHRFNLADREGVADRKVPLQPLVFMSADGTSKRYNLRKFGELPFHLVRSKRFTDLYAEVLFNYEWLHAKLNCCPLQAVLADFEDAKLHVNKDAVRELMLVADALRLGGAILGTYPDMLAPQLVGRLLPEAPHNPAVASLLKQCHDKGKNHCALLPSHHCLHTPGGPLKYSLEGHQFAVFAFRLSSDKRYVVSISSRVISWDLSTSDLARDLCPQLEGIMQNLELSPDNKWAAASTNNSVSMLLNMLTSEYVTIDNPLDEGETVRGVFVLNHHMIIYGPRSWVQYSMRGEHEKTIPAPDTAPYDDVEWEILSMEFRDLENFVLVMWSGDLDEDRLLVLFCKEGAWMRPLRCRGAMALSKNWNKIYSSDPDRGYQISIYQLNDEEGCWDKIEELHHRETDTAEAMLQLKRGKKDKMLLG

Uniprot

H9J4Y6   A0A2W1BJX8   A0A2A4JCC0   A0A3S2TKP3   A0A212F853   A0A194R440   + More
A0A1W4XMN4   A0A084VHT9   Q0IFD7   A0A182N2C0   A0A182QN31   T1I544   A0A182G340   U4UIZ9   A0A182J713   A0A1I8N5Z0   A0A336MEJ1   A0A182NZL9   N6TQT6   A0A182RTD4   A0A182WDI4   A0A0K8WB69   A0A1Q3FSW4   A0A182JNC1   A0A1W4VEG6   A0A182VE12   A0A182L3H2   B4PR45   A0A1I8NYU7   A0A182U632   A0A026WF60   A0A182X5M2   B3P0X9   A0A1I8NYT7   A0A182HWC7   Q7QHF1   A0A1A9V657   B0WL71   A0A182LYL0   A0A182YB27   A0A3B0JTE2   B4GML1   A0A1A9X452   Q294U8   A0A0R3NJD4   A0A0R3NQ94   A0A0L0BP11   A0A0R3NNX5   A0A1B0GDT5   A0A195BFH5   F4WAY8   A0A1A9ZY44   A0A151XF31   B4HLE3   B3MXB4   E2BLG4   B4KAF4   A0A158NRE9   A0A182FKK4   W5J7I9   A0A1B0BF52   Q9VEZ2   A0A1A9X8M2   A0A151JBR8   A0A151IFS8   A0A195FJX0   B4LY14   A0A3L8DKH5   E2AUX2   A0A0M4EGP6   B4QXQ8   A0A088AR94   A0A067QH37   B4NL15   B4JGA1   A0A2A3ED85   A0A232F7U5   A0A0L7RCH5   A0A2S2PDS7   J9JUM0   E9IS16   E9HFF2   E0VJC5   A0A0K2TJB3   T1J835   A0A310SMH0   K7JQM9   A0A0P5NBS2   A0A0P6G182   A0A0P5N8L5   A0A0P6HBY7   A0A0P6EH52   A0A0P5WGQ2   A0A0P6BKM1   A0A0N8CXZ7   A0A0P6A0G0   A0A0P5UKF9   A0A0P5MKE0   A0A162R3C6  

Pubmed

19121390    28756777    22118469    26354079    24438588    17510324    + More
26483478    23537049    25315136    20966253    17994087    17550304    24508170    12364791    14747013    17210077    25244985    15632085    26108605    21719571    20798317    21347285    20920257    23761445    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    30249741    24845553    28648823    21282665    21292972    20566863    20075255   

EMBL

BABH01025676    BABH01025677    KZ149997    PZC75382.1    NWSH01001908    PCG69725.1    + More
RSAL01000078    RVE48741.1    AGBW02009801    OWR49898.1    KQ460761    KPJ12573.1    ATLV01013235    KE524847    KFB37533.1    CH477356    EAT42778.1    AXCN02001729    ACPB03010524    JXUM01140736    JXUM01140737    JXUM01140738    JXUM01140739    KQ569115    KXJ68757.1    KB632344    ERL93057.1    UFQT01001083    SSX28802.1    APGK01055161    APGK01055162    KB741261    ENN71565.1    GDHF01004214    JAI48100.1    GFDL01004390    JAV30655.1    CM000160    EDW97367.1    KK107238    EZA54682.1    CH954181    EDV49098.1    APCN01001484    AAAB01008816    EAA05136.3    DS231980    EDS30244.1    AXCM01001359    OUUW01000008    SPP83672.1    CH479185    EDW38085.1    CM000070    EAL28866.2    KRT01137.1    KRT01136.1    JRES01001582    KNC21746.1    KRT01135.1    CCAG010012025    KQ976504    KYM82920.1    GL888056    EGI68608.1    KQ982205    KYQ58996.1    CH480815    EDW41963.1    CH902629    EDV35337.1    GL449017    EFN83516.1    CH933806    EDW15667.1    ADTU01023849    ADMH02002090    ETN59363.1    JXJN01013283    JXJN01013284    JXJN01013285    AE014297    AAF55270.1    KQ979122    KYN22530.1    KQ977771    KYM99979.1    KQ981522    KYN40557.1    CH940650    EDW66880.1    QOIP01000007    RLU20944.1    GL442898    EFN62780.1    CP012526    ALC45346.1    CM000364    EDX12732.1    KK853768    KDQ84119.1    CH964272    EDW84218.1    CH916369    EDV92570.1    KZ288289    PBC29252.1    NNAY01000701    OXU26911.1    KQ414615    KOC68524.1    GGMR01014988    MBY27607.1    ABLF02037162    GL765283    EFZ16709.1    GL732635    EFX69546.1    DS235222    EEB13481.1    HACA01008250    CDW25611.1    JH431948    KQ763581    OAD54968.1    GDIQ01144357    JAL07369.1    GDIQ01040043    JAN54694.1    GDIQ01145710    JAL06016.1    GDIQ01022359    JAN72378.1    GDIQ01076922    JAN17815.1    GDIP01086821    JAM16894.1    GDIP01013562    JAM90153.1    GDIP01087871    JAM15844.1    GDIP01037234    JAM66481.1    GDIP01111618    JAL92096.1    GDIQ01178037    JAK73688.1    LRGB01000243    KZS20194.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053240    UP000192223    + More
UP000030765    UP000008820    UP000075884    UP000075886    UP000015103    UP000069940    UP000249989    UP000030742    UP000075880    UP000095301    UP000075885    UP000019118    UP000075900    UP000075920    UP000075881    UP000192221    UP000075903    UP000075882    UP000002282    UP000095300    UP000075902    UP000053097    UP000076407    UP000008711    UP000075840    UP000007062    UP000078200    UP000002320    UP000075883    UP000076408    UP000268350    UP000008744    UP000091820    UP000001819    UP000037069    UP000092444    UP000078540    UP000007755    UP000092445    UP000075809    UP000001292    UP000007801    UP000008237    UP000009192    UP000005205    UP000069272    UP000000673    UP000092460    UP000000803    UP000092443    UP000078492    UP000078542    UP000078541    UP000008792    UP000279307    UP000000311    UP000092553    UP000000304    UP000005203    UP000027135    UP000007798    UP000001070    UP000242457    UP000215335    UP000053825    UP000007819    UP000000305    UP000009046    UP000002358    UP000076858   

PRIDE

H9J4Y6    Q9VEZ2   

Pfam

PF05729   NACHT        + More
PF00400   WD40
PF13271   DUF4062
PF13191   AAA_16

Interpro

IPR019775   WD40_repeat_CS        + More
IPR027417   P-loop_NTPase       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR007111   NACHT_NTPase       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR025139   DUF4062       
IPR011048   Haem_d1_sf       
IPR036322   WD40_repeat_dom_sf       
IPR041664   AAA_16       
IPR011044   Quino_amine_DH_bsu       

SUPFAM

SSF50998   SSF50998        + More
SSF52540   SSF52540       
SSF51004   SSF51004       
SSF50978   SSF50978       
SSF50969   SSF50969       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9J4Y6   A0A2W1BJX8   A0A2A4JCC0   A0A3S2TKP3   A0A212F853   A0A194R440   + More
A0A1W4XMN4   A0A084VHT9   Q0IFD7   A0A182N2C0   A0A182QN31   T1I544   A0A182G340   U4UIZ9   A0A182J713   A0A1I8N5Z0   A0A336MEJ1   A0A182NZL9   N6TQT6   A0A182RTD4   A0A182WDI4   A0A0K8WB69   A0A1Q3FSW4   A0A182JNC1   A0A1W4VEG6   A0A182VE12   A0A182L3H2   B4PR45   A0A1I8NYU7   A0A182U632   A0A026WF60   A0A182X5M2   B3P0X9   A0A1I8NYT7   A0A182HWC7   Q7QHF1   A0A1A9V657   B0WL71   A0A182LYL0   A0A182YB27   A0A3B0JTE2   B4GML1   A0A1A9X452   Q294U8   A0A0R3NJD4   A0A0R3NQ94   A0A0L0BP11   A0A0R3NNX5   A0A1B0GDT5   A0A195BFH5   F4WAY8   A0A1A9ZY44   A0A151XF31   B4HLE3   B3MXB4   E2BLG4   B4KAF4   A0A158NRE9   A0A182FKK4   W5J7I9   A0A1B0BF52   Q9VEZ2   A0A1A9X8M2   A0A151JBR8   A0A151IFS8   A0A195FJX0   B4LY14   A0A3L8DKH5   E2AUX2   A0A0M4EGP6   B4QXQ8   A0A088AR94   A0A067QH37   B4NL15   B4JGA1   A0A2A3ED85   A0A232F7U5   A0A0L7RCH5   A0A2S2PDS7   J9JUM0   E9IS16   E9HFF2   E0VJC5   A0A0K2TJB3   T1J835   A0A310SMH0   K7JQM9   A0A0P5NBS2   A0A0P6G182   A0A0P5N8L5   A0A0P6HBY7   A0A0P6EH52   A0A0P5WGQ2   A0A0P6BKM1   A0A0N8CXZ7   A0A0P6A0G0   A0A0P5UKF9   A0A0P5MKE0   A0A162R3C6  

KEGG

101745707    no KO assigned | (RefSeq) NACHT and WD repeat domain-containing protein 2

GO

GO:0097344   GO:0006364   GO:0005656   GO:0030174   GO:0005515   GO:0005509   GO:0016021   GO:0016020   GO:0022857   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259  

Length:

884

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.735919999999999

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.02151

outside

1  -  884

 

 

Pi

263.014967

Theta

195.025769

Tajima's D

1.713287

CLR

0.279683

CSRT

0.828558572071396

Interpretation

Uncertain