Gene

KWMTBOMO16073

Pre Gene Modal

BGIBMGA004576

Annotation

PREDICTED:_uncharacterized_protein_LOC106713509_[Papilio_machaon]

Location

Bomo_Chr27(-):8203398-8208504      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.44 Mitochondrial   Reliability : 1.424 Peroxisomal   Reliability : 1.154

CDS

ATGTGGCGTTTTGGTAAGAAAAACCTTTACGTCTGGAGTCTTGAAACCACGACGCTGATAAAAGTACTGGACGCTCACTTTGGCAGAATAGTCCAACTGGAACCGTTGACTGTTGGAGCTTGGAACAATGTGATAACGTCGTCCATAGACAGGACGGTCAAGATATGGAACATTGATAACATATTTGAGCAAGTACATAAGATTGATCGACAAGAACTGCCCATTGATTCTATTAGCCTAGCACGCGACAAGCAACTAGCGGTAACCGTCACCCGTAGCTGTTGGGGCCTCTGGGATACGAGCACCGGTCGGTTGATGGCGCAATTAGCTGACGCTCCGCTCGGCGCCATCGTCACGCACGCGGTCATCACGCCCACTGGAGATCACGTAGTCACTGCGGAATCGGGCTGCGTTATTATATGGGATACTCCTGAAAAACAGGGAATCTTCAAGGAAGAACAAAAAGGTGTAAAACAAGTTCTGCTTCTAGAAGACGGGACGAAATTCATCACGATATCTATGCAGGTGCCCGCTGATAACACGGATAACGTTGCTGTTGCTTATATCGTGGCAAGAACTATACCTGACGGTGAAAGAATTTACACAGCAGAATACGACGTTCGGGGTACCGGCTACAGAGCCGCTGTGGTTTCTGCAGAGGAACATCATCTAGTTGCTCCCGGAGTGGACAAGTCCTCCAGGGACTGTCTACATGTATTCCATGCTAGAACCGGAGCGAGGATACATAGGATACCAATTAAGAACAGCGGCATCAAAGACATGCAATCTATTGTGGCGTTGCCCCACAAGGCGCTCTGGGTGGCAGTCGTCGGTAATGACAAAGCCGGTATATTGGACATCAAAAGCAAAAGACTCATCAGATTTGTTCCACGTTGGAATGGCGCATGTACTCGCGATGGTAAGCTGGGGCTCTGTGCGCCTTCCAGAGGGGGGCTCGACCTCATAGAACTAAAGAGAGGAACATCGGTGCACCCCCTTATATACAGGGCGGCTGAAGGCGTATTTTCCATCATCACCATGTTTAGCTCGACAGACCATTATGTATTTTATTATCACAGCGGCAGGAAAACACTGAGAGTTTTCAGAACAATAGACGGTCGTGCTATAGCTGAGTACCGGGCGCCGGCCGAAGTCACAGGCGTGGCCAGCGCTCATGGAGGCAAAGCTGTCGCTATCGCCTCACAGGACGGTTGTCTCACAATCCTTAACATTGTTGACCCATACGAATGA

Protein

MWRFGKKNLYVWSLETTTLIKVLDAHFGRIVQLEPLTVGAWNNVITSSIDRTVKIWNIDNIFEQVHKIDRQELPIDSISLARDKQLAVTVTRSCWGLWDTSTGRLMAQLADAPLGAIVTHAVITPTGDHVVTAESGCVIIWDTPEKQGIFKEEQKGVKQVLLLEDGTKFITISMQVPADNTDNVAVAYIVARTIPDGERIYTAEYDVRGTGYRAAVVSAEEHHLVAPGVDKSSRDCLHVFHARTGARIHRIPIKNSGIKDMQSIVALPHKALWVAVVGNDKAGILDIKSKRLIRFVPRWNGACTRDGKLGLCAPSRGGLDLIELKRGTSVHPLIYRAAEGVFSIITMFSSTDHYVFYYHSGRKTLRVFRTIDGRAIAEYRAPAEVTGVASAHGGKAVAIASQDGCLTILNIVDPYE

Uniprot

A0A2A4JCC0   A0A2W1BJX8   A0A2H1W6D7   A0A194R440   A0A3S2TKP3   A0A212F853   + More
A0A0N1IE15   A0A2J7RFG5   A0A2H8TJ14   A0A195FJX0   A0A158NRE9   F4WAY8   A0A195BFH5   A0A151JBR8   A0A0N0U7I8   A0A3L8DKH5   E2AUX2   A0A151IFS8   E0VJC5   A0A151XF31   A0A2A3ED85   A0A026WF60   A0A088AR94   A0A182SYU0   A0A182WDI4   A0A310SMH0   A0A1W4XMN4   A0A2S2PDS7   J9JUM0   E2BLG4   A0A182LYL0   A0A1B0CWF8   A0A182RTD4   A0A182N2C0   A0A182U632   A0A182HWC7   A0A182VE12   T1I544   A0A034V0T7   Q7QHF1   A0A182YB27   A0A182NZL9   A0A336MEJ1   A0A182L3H2   A0A182QN31   A0A182JNC1   A0A182X5M2   W5J7I9   A0A182J713   A0A084VHT9   A0A232F7U5   A0A182FKK4   Q0IFD7   B0WL71   A0A0L7RCH5   A0A067QH37   A0A182G340   N6TQT6   U4UIZ9   A0A1Q3FSW4   A0A0K8VJN8   A0A0L0BP11   A0A1I8N5Z0   A0A1W4VEG6   B4LY14   B3MXB4   A0A0K8WB69   B3P0X9   Q9VEZ2   B4PR45   B4QXQ8   B4JGA1   B4NL15   B4KAF4   A0A1I8NYU7   A0A1I8NYT7   A0A1D2N487   A0A3B0JTE2   Q294U8   A0A0R3NQ94   B4GML1   A0A0R3NNX5   A0A0R3NJD4   A0A1B0GDT5   A0A1A9X452   A0A1A9V657   A0A1A9X8M2   A0A1A9ZY44   A0A1B0BF52   A0A0M4EGP6   A0A226DAE0   A0A2P8XE62   K7JQM9   E9HFF2   A0A0P5WGQ2   A0A0P6HBY7   A0A0P5TR82   A0A162R3C6   A0A0P5UKF9  

Pubmed

28756777    26354079    22118469    21347285    21719571    30249741    + More
20798317    20566863    24508170    25348373    12364791    14747013    17210077    25244985    20966253    20920257    23761445    24438588    28648823    17510324    24845553    26483478    23537049    26108605    25315136    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    27289101    15632085    29403074    20075255    21292972   

EMBL

NWSH01001908    PCG69725.1    KZ149997    PZC75382.1    ODYU01006321    SOQ48064.1    + More
KQ460761    KPJ12573.1    RSAL01000078    RVE48741.1    AGBW02009801    OWR49898.1    KQ458842    KPJ04911.1    NEVH01004413    PNF39578.1    GFXV01001877    MBW13682.1    KQ981522    KYN40557.1    ADTU01023849    GL888056    EGI68608.1    KQ976504    KYM82920.1    KQ979122    KYN22530.1    KQ435711    KOX79674.1    QOIP01000007    RLU20944.1    GL442898    EFN62780.1    KQ977771    KYM99979.1    DS235222    EEB13481.1    KQ982205    KYQ58996.1    KZ288289    PBC29252.1    KK107238    EZA54682.1    KQ763581    OAD54968.1    GGMR01014988    MBY27607.1    ABLF02037162    GL449017    EFN83516.1    AXCM01001359    AJWK01032340    AJWK01032341    AJWK01032342    AJWK01032343    AJWK01032344    AJWK01032345    APCN01001484    ACPB03010524    GAKP01023219    JAC35737.1    AAAB01008816    EAA05136.3    UFQT01001083    SSX28802.1    AXCN02001729    ADMH02002090    ETN59363.1    ATLV01013235    KE524847    KFB37533.1    NNAY01000701    OXU26911.1    CH477356    EAT42778.1    DS231980    EDS30244.1    KQ414615    KOC68524.1    KK853768    KDQ84119.1    JXUM01140736    JXUM01140737    JXUM01140738    JXUM01140739    KQ569115    KXJ68757.1    APGK01055161    APGK01055162    KB741261    ENN71565.1    KB632344    ERL93057.1    GFDL01004390    JAV30655.1    GDHF01013227    JAI39087.1    JRES01001582    KNC21746.1    CH940650    EDW66880.1    CH902629    EDV35337.1    GDHF01004214    JAI48100.1    CH954181    EDV49098.1    AE014297    AAF55270.1    CM000160    EDW97367.1    CM000364    EDX12732.1    CH916369    EDV92570.1    CH964272    EDW84218.1    CH933806    EDW15667.1    LJIJ01000234    ODN00079.1    OUUW01000008    SPP83672.1    CM000070    EAL28866.2    KRT01136.1    CH479185    EDW38085.1    KRT01135.1    KRT01137.1    CCAG010012025    JXJN01013283    JXJN01013284    JXJN01013285    CP012526    ALC45346.1    LNIX01000028    OXA41697.1    PYGN01002564    PSN30262.1    GL732635    EFX69546.1    GDIP01086821    JAM16894.1    GDIQ01022359    JAN72378.1    GDIP01123917    JAL79797.1    LRGB01000243    KZS20194.1    GDIP01111618    JAL92096.1   

Proteomes

UP000218220    UP000053240    UP000283053    UP000007151    UP000053268    UP000235965    + More
UP000078541    UP000005205    UP000007755    UP000078540    UP000078492    UP000053105    UP000279307    UP000000311    UP000078542    UP000009046    UP000075809    UP000242457    UP000053097    UP000005203    UP000075901    UP000075920    UP000192223    UP000007819    UP000008237    UP000075883    UP000092461    UP000075900    UP000075884    UP000075902    UP000075840    UP000075903    UP000015103    UP000007062    UP000076408    UP000075885    UP000075882    UP000075886    UP000075881    UP000076407    UP000000673    UP000075880    UP000030765    UP000215335    UP000069272    UP000008820    UP000002320    UP000053825    UP000027135    UP000069940    UP000249989    UP000019118    UP000030742    UP000037069    UP000095301    UP000192221    UP000008792    UP000007801    UP000008711    UP000000803    UP000002282    UP000000304    UP000001070    UP000007798    UP000009192    UP000095300    UP000094527    UP000268350    UP000001819    UP000008744    UP000092444    UP000091820    UP000078200    UP000092443    UP000092445    UP000092460    UP000092553    UP000198287    UP000245037    UP000002358    UP000000305    UP000076858   

PRIDE

Q9VEZ2   

Pfam

PF00400   WD40        + More
PF13271   DUF4062
PF05729   NACHT
PF13191   AAA_16

Interpro

IPR011047   Quinoprotein_ADH-like_supfam        + More
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR011048   Haem_d1_sf       
IPR019775   WD40_repeat_CS       
IPR027417   P-loop_NTPase       
IPR025139   DUF4062       
IPR007111   NACHT_NTPase       
IPR011044   Quino_amine_DH_bsu       
IPR036322   WD40_repeat_dom_sf       
IPR041664   AAA_16       

SUPFAM

SSF51004   SSF51004        + More
SSF50998   SSF50998       
SSF52540   SSF52540       
SSF50969   SSF50969       
SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

A0A2A4JCC0   A0A2W1BJX8   A0A2H1W6D7   A0A194R440   A0A3S2TKP3   A0A212F853   + More
A0A0N1IE15   A0A2J7RFG5   A0A2H8TJ14   A0A195FJX0   A0A158NRE9   F4WAY8   A0A195BFH5   A0A151JBR8   A0A0N0U7I8   A0A3L8DKH5   E2AUX2   A0A151IFS8   E0VJC5   A0A151XF31   A0A2A3ED85   A0A026WF60   A0A088AR94   A0A182SYU0   A0A182WDI4   A0A310SMH0   A0A1W4XMN4   A0A2S2PDS7   J9JUM0   E2BLG4   A0A182LYL0   A0A1B0CWF8   A0A182RTD4   A0A182N2C0   A0A182U632   A0A182HWC7   A0A182VE12   T1I544   A0A034V0T7   Q7QHF1   A0A182YB27   A0A182NZL9   A0A336MEJ1   A0A182L3H2   A0A182QN31   A0A182JNC1   A0A182X5M2   W5J7I9   A0A182J713   A0A084VHT9   A0A232F7U5   A0A182FKK4   Q0IFD7   B0WL71   A0A0L7RCH5   A0A067QH37   A0A182G340   N6TQT6   U4UIZ9   A0A1Q3FSW4   A0A0K8VJN8   A0A0L0BP11   A0A1I8N5Z0   A0A1W4VEG6   B4LY14   B3MXB4   A0A0K8WB69   B3P0X9   Q9VEZ2   B4PR45   B4QXQ8   B4JGA1   B4NL15   B4KAF4   A0A1I8NYU7   A0A1I8NYT7   A0A1D2N487   A0A3B0JTE2   Q294U8   A0A0R3NQ94   B4GML1   A0A0R3NNX5   A0A0R3NJD4   A0A1B0GDT5   A0A1A9X452   A0A1A9V657   A0A1A9X8M2   A0A1A9ZY44   A0A1B0BF52   A0A0M4EGP6   A0A226DAE0   A0A2P8XE62   K7JQM9   E9HFF2   A0A0P5WGQ2   A0A0P6HBY7   A0A0P5TR82   A0A162R3C6   A0A0P5UKF9  

PDB

6J6Q     E-value=0.000442876,     Score=103

KEGG

101745707    no KO assigned | (RefSeq) NACHT and WD repeat domain-containing protein 2

GO

GO:0097344   GO:0006364   GO:0005656   GO:0030174   GO:0005515   GO:0005509   GO:0016021   GO:0016020   GO:0022857   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259  

Length:

416

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.71391

Exp number, first 60 AAs:

0.0279

Total prob of N-in:

0.01547

outside

1  -  416

 

 

Pi

306.830286

Theta

164.466183

Tajima's D

3.467589

CLR

0.364735

CSRT

0.993200339983001

Interpretation

Uncertain