SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16072  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004571
Annotation
PREDICTED:_fibrillin-3-like_[Bombyx_mori]
Location
Bomo_Chr27(+):8162385-8200746      View in EpiBrowser
Location in the cell
Extracellular   Reliability : 2.472
 

Sequence

CDS
ATGTGGTTAAGAAATACGCTAATAATTGCATTCCTGACTGTGTGTCGGGATGTCTCTGGTGACATAGGCGACGATATGACAGAAGCCATCCAGCTATGCTGCAACGCGGGGACTGCTGATGCACGGAACCAAACCACGCCAGACTGTTCGGCTGAGCACCCCCTACCATCGAAGGTGCCGGCAGCCTTCAACACACTCTGCATCATAGCCAGATCTCAATGCTGTAAAGAGTATACTCAGAAGAAGCGAGACTGCGAAAACGGTATCGACATTGGAATTAGTACGAAGCGCTGTGACTCTACATCTGGTTCCACTAAGGTTTGCTGTGGGGAGTGCGTCAGGGGAAAGAACATAGGACTTGTTAAAGGTTTCTCGATCTGCGATGTCCTGACACGCGGTAACAGCGCCGAGGAGTTGTTGGCTGATGATGCTTACGCGCAATGCTGCAAGAATGGAGCGCAGGAGAGCAACAGGAGTATGGTACATACTAACGTTAGTCCGGAATCGATTGGAAAAATAGCATCGCTTTGTGAAGACTACGCTCCAACCGAACTCTGTGCCCACCACTGCATTCCGGTACCAGGGTCTTACAAGTGCGAATGTAATCCTGGATTCATGCTTATGGCTGACGGGAGGAATTGCAAGGAGGTTATAAAAAACCGCTGCCGACCACGGAATCCTTGTCAGCACAAATGCAACGACAATGGCATCACAGTGAAATGCTCCTGTCGACGTGGCTATGAACTCATGCCGGATGGGAAGTCCTGTAAAGATATAGATGAATGCCAACTAGATTTGTCGATCTGCCTCCCTGGAACCAAATGCTTCAATACACGAGGCTCTTACAAATGTGTGCCCGTACAAATGAACTTCAATCGTGAAGGACTCATGAAGGAATGCCCTCCGGGATTCTTTAGGAACATCTATAAAGATCTCTGTGACGACATTAACGAATGTAAGCTGCCGAAGCCCCCTTGTCCCGTGCACGTGTGCGAGAATACAGTCGGAGGCTACAAATGCGATGGAGTCAGTGGAGATCCAGTCAACTTGAGCAGTACTCCGATGACTCCGGAACAAGACAAATGCCCTCAAGGATTCAAGTTCGGTCATCACGGAGAATGTGAAGATATGGACGAATGCGTTTCACATGAAGACGACTGCAATCCTCTTTCACAATTCTGCATAAACACGCACGGCTCCTTCCACTGTCAAGATATGGTATCAAAGCACTGCCCTCCAGGCTTTAAGATCAACGAAGTTAATGGTAGATGTGAAGATATAAACGAATGCGAAGACGATACAGAAATCTGTCGGTCAGATCAGGACTGCATCAATCAACTCGGTCGATATGACTGCAAATCGAAAGTCAGCAGATTCAAATCCAATCAGCAGTGTCCAGATGGAATGCGCAATAATTCAAAAGTTTGCGAAGACATAAACGAGTGCCTTGAAGGAACCCATCTTTGCGACCAGCATCAGAACTGTCTCAACACAAATGGCAGTTACGAATGTCACTGCAAAGTTGGATACGAATTGGACGTTACCACTAGTGCTTGTATTGATATGAACGAATGCGCTACCGGCCAACACAACTGCATTATCGGTTCGCAGCGTTGCGATAACACAGTTGGTTCCTTCCTCTGCATCAGGATTACATCTTGTGGCACCGGATACATTTTGCATCATTCAACCGGCACATGTGAAGATATCGACGAGTGCGCACTAGGAACTCACAATTGCGCTCGCGCCGGCCCAGAGTACCAGTGCATCAACATCCCAGGGTCTTTCCGCTGCGTAAGGCGGAGGACATCAACAACTTCCACAACAGCTCTACCCGAATATGAATACGTCTATTACGATATAGAAGATGGAGAAAATCCTGAGGAAAAACAAACAGTAGCAGTGAATAATCTGGATAATAGCACACCTTCTACTACAACTACCAGCACTTCAACTACTGAGCTCTCATCATCTTCTACGCAATCTATTCAACCGAGTTCACCATCACCCTCACCGTCCAGCGAAATACCAACTATAAATATTCCTACGCACCCTTCACCCGATGAAGATATAAATAGTATAATTCCACCGCCGAATTATAACGAGCCAATCCAACCGGATATATTTTATTCCGAACCAAAATCGACAACAACAGAATCACGCCCACTTACTATACCAGTAACTACAGTAACACCGATCCCAGCAACATCGCAACCCGAACCATCTCAATCAGAGCCTTCGAAATTTGAACCTAATACCGAAACGCCGAAACCGGAACCTCCAAAAACCGAATATCCCGAACTTCAGTCTCCGAAGCCTACGGAACCAGAGCCAACTGAACCGGGTATCTTCTACAGTGAACCGAAAACTGATATTTCTTCAACAACAACAACCCACGAATACATTACTGACAGTGAACCGAAGTCAAATCTAATACCTTACGAGCCGAGATATCCAGAGCCGACAATTACTTATGCAGAACTTAAACCGGACCAAGATATCTCAACGAACTTTGTTCCTTACGAAATCGATAAAGATACAACCTACGAGAAAACTTCTGAGAAGTATCCGTACAGTACCGAATCCGGAAAGCCTATTTATCCGCATACAATATTTGTTGATGTTAGCAAAGACGCGCCTACTGTTGAAGGCAAGAGAACAAGCGATGGATCTGTGGTTATCGACGCGAACAGTATACCGGAAAATGAATGGACGAAAGTCAGCGTTAAGCCCATTAGTTGTCCCCATGGATACGAACCAGATGAATACGGAGCATGTTTTGATGTCGATGAATGTTTCACGAATCGCCACACGTGCTATAATAATACTGAGGTCTGTAAGAACACCGTCGGCGGATATATTTGCAACTGCGCTCCGGGATACACAAAATATAATGACACAGGCTTTTGTACGATTATAACAACGTCGTCTACCTCGACGAGTACATCCACAACAACAAGTACCACTACAACAGCTCCTACGACCAGCGAAAAGAACTTTTTCTGGAGCTATCCTGATTATCGGCCGATCACAACGCGGCCATTCCGACCTAGGAACCCATGCGATGTTGGATTTTATCTGGATCAAAAAACAGGCACCTGTGAAGATATTAACGAATGCACAAACGGTCAAGCGGACTGTGCTGCTGTGGAGATCTGCGTCAACACTCAAGGAGGATACAAATGTGAATGCCCACCGAACTGGAGTCTCGATGATGTTCGGCATCGATGCGTGCCGATCAGGAGACATGGTCTATTCCCACCCGGTTATGGGAATGAGCCTCCACATGATTCGAGACCAGTAGTCAGCTATACAAGCAAGCCTCCAGAAAGTCCGGTCAGTCCAAAAGTCACACACGTCGATGACCGCGGTAGAGTTTTTAAATGCCCGTGGGGATACCGCCTCGGTATAGACAATGTTTGCGAAGATATCAACGAATGTGTAACCGGAGAAGCTAGATGTGGGCCGTTGCAAATTTGTACGAACTTGCCCGGAGGATACACGTGTAGCTGTCCTAATGGTCACCGTTTAGCTGGTGACCATGAATGTGAGGACGTGGACGAGTGTGACCTTGCTGGGAAGATGATGATCTGTTCGCGAAACGCGGATTGCATTAACACCATAGGATCGTACCAGTGCAAATGTCATAACGGCTTCAGACCCGCTCCTGTTAATAATAAGGTATGCGTGGATGTAGACGAATGCACTGAATCCAATTCGAGGTCCCTTTGTCAGCACCGCTGCAACAACGTCTGGGGAGGATACCGGTGTTCCTGCTACAAAGGATACCGTTTAAATATTGACAACAAAACCTGTTCGGACATAGATGAGTGTTCGGAATTGAAATCGAAAATGTTGTGCATCGGTCGCTGCCATAACGAGCCGGGGAGATACAGATGCTCCTGCCCTAGGGGATATAGGCTTTCGGAAGACAAAAGGAGCTGTATCGATATCGACGAATGCGAAACTGGCGAAGCGACTTGCGCGAAAAGTGGCATATTCGGGAGCACCAGCTACCTTTGTTTCAACACCAGAGGAAGTTACCGTTGTCCCCAGATTACCTGCCCGCCGGGCTACAGGCTAGAAAATAAACACCGCTGCTCGAAGGCTGGCGAAATTTGCAGACTTGGAGACTGGGAGTGCGCACACAAGCCCACCACAATATCATACAACTTCATCACATTCGTTTCGAAACTATACATACCCGCTTCTACGGTGAACCTGTTCACGATGAGGGGCCCGACTTGGCCGAACGCTCGTATTAAGTTCCAACTTAAGCTGGTGGAAGTTGACGCTCCGCCAACCGTCAAAGATAAAGCTGATATTAATACCTTCTTATTATCCCAGAACAACAACGAAGGCGTGATGTCTCTGGGTCGTCCTCTGGAAGGACCACAGAGCATAAAGTTGGACTTAATAATGGAGCTATACAACAATGGGCAGTTCGGAGGCATTGCTGTCGCGAAAATATTCATTTACGTGTCCGATTACGAGTTCTAA
Protein
MWLRNTLIIAFLTVCRDVSGDIGDDMTEAIQLCCNAGTADARNQTTPDCSAEHPLPSKVPAAFNTLCIIARSQCCKEYTQKKRDCENGIDIGISTKRCDSTSGSTKVCCGECVRGKNIGLVKGFSICDVLTRGNSAEELLADDAYAQCCKNGAQESNRSMVHTNVSPESIGKIASLCEDYAPTELCAHHCIPVPGSYKCECNPGFMLMADGRNCKEVIKNRCRPRNPCQHKCNDNGITVKCSCRRGYELMPDGKSCKDIDECQLDLSICLPGTKCFNTRGSYKCVPVQMNFNREGLMKECPPGFFRNIYKDLCDDINECKLPKPPCPVHVCENTVGGYKCDGVSGDPVNLSSTPMTPEQDKCPQGFKFGHHGECEDMDECVSHEDDCNPLSQFCINTHGSFHCQDMVSKHCPPGFKINEVNGRCEDINECEDDTEICRSDQDCINQLGRYDCKSKVSRFKSNQQCPDGMRNNSKVCEDINECLEGTHLCDQHQNCLNTNGSYECHCKVGYELDVTTSACIDMNECATGQHNCIIGSQRCDNTVGSFLCIRITSCGTGYILHHSTGTCEDIDECALGTHNCARAGPEYQCINIPGSFRCVRRRTSTTSTTALPEYEYVYYDIEDGENPEEKQTVAVNNLDNSTPSTTTTSTSTTELSSSSTQSIQPSSPSPSPSSEIPTINIPTHPSPDEDINSIIPPPNYNEPIQPDIFYSEPKSTTTESRPLTIPVTTVTPIPATSQPEPSQSEPSKFEPNTETPKPEPPKTEYPELQSPKPTEPEPTEPGIFYSEPKTDISSTTTTHEYITDSEPKSNLIPYEPRYPEPTITYAELKPDQDISTNFVPYEIDKDTTYEKTSEKYPYSTESGKPIYPHTIFVDVSKDAPTVEGKRTSDGSVVIDANSIPENEWTKVSVKPISCPHGYEPDEYGACFDVDECFTNRHTCYNNTEVCKNTVGGYICNCAPGYTKYNDTGFCTIITTSSTSTSTSTTTSTTTTAPTTSEKNFFWSYPDYRPITTRPFRPRNPCDVGFYLDQKTGTCEDINECTNGQADCAAVEICVNTQGGYKCECPPNWSLDDVRHRCVPIRRHGLFPPGYGNEPPHDSRPVVSYTSKPPESPVSPKVTHVDDRGRVFKCPWGYRLGIDNVCEDINECVTGEARCGPLQICTNLPGGYTCSCPNGHRLAGDHECEDVDECDLAGKMMICSRNADCINTIGSYQCKCHNGFRPAPVNNKVCVDVDECTESNSRSLCQHRCNNVWGGYRCSCYKGYRLNIDNKTCSDIDECSELKSKMLCIGRCHNEPGRYRCSCPRGYRLSEDKRSCIDIDECETGEATCAKSGIFGSTSYLCFNTRGSYRCPQITCPPGYRLENKHRCSKAGEICRLGDWECAHKPTTISYNFITFVSKLYIPASTVNLFTMRGPTWPNARIKFQLKLVEVDAPPTVKDKADINTFLLSQNNNEGVMSLGRPLEGPQSIKLDLIMELYNNGQFGGIAVAKIFIYVSDYEF

Summary

Uniprot
NA  
ProteinModelPortal
NA  
PDB
6GJE     E-value=5.29864e-15,     Score=203

Ontologies

KEGG
101745856    K17307 fibulin 1/2 | (RefSeq) fibrillin-3-like
GO
GO:0005515   GO:0005509   GO:0016021   GO:0016020   GO:0022857   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259  

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.977380
 
 
Length:
1499
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.37133
Exp number, first 60 AAs:
0.00162
Total prob of N-in:
0.00009
outside
1  -  1499
 
 

Population Genetic Test Statistics

Pi
288.429976
Theta
180.833015
Tajima's D
1.034038
CLR
0.423972
CSRT
0.667516624168792
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号