Gene

KWMTBOMO16063

Pre Gene Modal

BGIBMGA004581

Annotation

PREDICTED:_protein-methionine_sulfoxide_oxidase_mical3a_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr27(-):7917038-7922384      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.51

CDS

ATGTATCCCTTTGTGCCAAAGGACGTGGTCCGCGCGGCCGATAAGCTTGAGGACGTGAAGATCGAGACCGCCGATATATCGGACCGGTTCAAGTTCTTCGAGACGTACAAACCGGAGACCAAGCGCAAGGAGTTCCGCATGACGCCGCCCAGACAAGTCCAGCGCAAGTCTCCGTCGCCGGAGCCATATCGCGCGCCGGACGTGGTGCGCGCCGACCAGCCCGCACCTCCACCCCCTGCCGCCCGCACCTCCCACATCATCTCCGTGTTCCGCCAGCTCGAGCACTCGCAGCAGCAGCAACAGCCGACAGGTCCCAAGCCGCTGAAGTGCTTCACGCCCCCTCCTCCCGGGGAGGGGAGCCGTCACCTCGACACCTCGGAAGACGAGTACTCCTCGGAGTACGAAGACGACAGCGAGGACGAGCGCAGGAGACAGTACCTGGATGCCAGAGACAGAGACGAGGCTCTCAAACAGGCGCAGCAGTTGGCCAGAACTAAGAGCTTCCGCGACCGCTTCGAGCACTGGTCCGAGTCGGAACCGCGACGGTCGCCGTCCGCCGTCGTCATCGAGCGCGAACAAAATGACGACGAGGGAGAATCTCAGCTAGAGACCGCTAAGAGTTTACGTCAGAAGTTCGAGAACATGCAAGTTCACCAGACGCCGGTCACCAAGACCTTCGCTAACAAAGTCAATCGATTCGTGTAA

Protein

MYPFVPKDVVRAADKLEDVKIETADISDRFKFFETYKPETKRKEFRMTPPRQVQRKSPSPEPYRAPDVVRADQPAPPPPAARTSHIISVFRQLEHSQQQQQPTGPKPLKCFTPPPPGEGSRHLDTSEDEYSSEYEDDSEDERRRQYLDARDRDEALKQAQQLARTKSFRDRFEHWSESEPRRSPSAVVIEREQNDDEGESQLETAKSLRQKFENMQVHQTPVTKTFANKVNRFV

Uniprot

H9J4Z1   A0A2A4JQ30   A0A2A4JQX5   A0A2H1W3M6   A0A3S2L9N7   A0A0N1IN34   + More
A0A212ES59   A0A310S936   A0A154PH31   A0A151WEM0   A0A195FH09   F4WEA4   A0A151ILQ7   A0A151I1A4   E2C1L4   A0A158N9E7   A0A088AF55   A0A0L7QYJ6   A0A151IUM6   A0A026X480   E2A256   A0A0M9ACF3   A0A0T6BHA7   A0A232FHR6   K7IUC4   A0A0C9R6E0   A0A161MJD7   T1HJN0   A0A0K8TYV6   A0A0K8WAU4   A0A0K8TY27   A0A1W4W145   A0A1W4WBT9   J9JQA5   R4WPQ9   D6WYU2   A0A0A9YKB1   O16057   B4PW53   A0A0R1ECY2   A0A034VCD1   A0A034VDZ5   A0A034VB88   A0A034VB84   A0A034VB80   A0A034VCD3   A0A1B6G5H1   A0A1B6GX06   A0A1B6J0U7   A0A1B6EKK1   W8BE50   A0A1B6FLG3   W8C1E7   A0A1B6MSZ5   W8BRQ5   A0A1B6LUN2   A0A1B6LV49   A0A1B6LLE5   A0A0J9S196   A0A0J9S1G0   A0A0J9S2Z4   A0A0J9S1F7   A0A0A1XRX3   B3P9N8   O16056   A0A0Q5SDX6   A0A0M4F7E1   E0VLU0   Q5BIG1   B4IKS1   A0A336L4I9   A0A1A9V0A0   Q59DP4  

Pubmed

19121390    26354079    22118469    21719571    20798317    21347285    + More
24508170    28648823    20075255    23691247    18362917    19820115    25401762    9275195    17994087    17550304    25348373    24495485    22936249    25830018    20566863    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867   

EMBL

BABH01025690    BABH01025691    NWSH01000793    PCG74175.1    PCG74176.1    ODYU01005985    + More
SOQ47432.1    RSAL01000078    RVE48733.1    KQ458842    KPJ04905.1    AGBW02012867    OWR44317.1    KQ767877    OAD53258.1    KQ434902    KZC11107.1    KQ983238    KYQ46328.1    KQ981606    KYN39656.1    GL888102    EGI67542.1    KQ977104    KYN05822.1    KQ976616    KYM79264.1    GL451937    EFN78190.1    ADTU01000137    ADTU01000138    ADTU01000139    ADTU01000140    ADTU01000141    KQ414688    KOC63685.1    KQ980956    KYN11098.1    KK107026    EZA62184.1    GL435922    EFN72461.1    KQ435706    KOX80299.1    LJIG01000224    KRT86716.1    NNAY01000211    OXU29999.1    AAZX01003953    AAZX01006931    GBYB01002321    JAG72088.1    GEMB01001101    JAS02046.1    ACPB03011838    ACPB03011839    ACPB03011840    ACPB03011841    ACPB03011842    ACPB03011843    ACPB03011844    GDHF01032650    JAI19664.1    GDHF01004102    JAI48212.1    GDHF01033133    JAI19181.1    ABLF02027357    ABLF02027363    ABLF02050035    AK417651    BAN20866.1    KQ971357    EFA08463.1    GBHO01042263    GBHO01031698    GBHO01031688    GBHO01030419    GBHO01030417    GBHO01025286    GBHO01020779    GBHO01018641    GBHO01013624    GBHO01013621    GBHO01013618    GBHO01013616    GBHO01013615    GBRD01005858    GBRD01004700    JAG01341.1    JAG11906.1    JAG11916.1    JAG13185.1    JAG13187.1    JAG18318.1    JAG22825.1    JAG24963.1    JAG29980.1    JAG29983.1    JAG29986.1    JAG29988.1    JAG29989.1    JAG59963.1    AF005862    AAB81493.1    CM000161    EDW99358.2    KRK05011.1    KRK05010.1    GAKP01019200    JAC39752.1    GAKP01019194    JAC39758.1    GAKP01019193    JAC39759.1    GAKP01019198    JAC39754.1    GAKP01019203    JAC39749.1    GAKP01019195    JAC39757.1    GECZ01012085    JAS57684.1    GECZ01002830    JAS66939.1    GECU01014908    JAS92798.1    GECZ01031343    JAS38426.1    GAMC01006995    JAB99560.1    GECZ01018734    JAS51035.1    GAMC01006994    JAB99561.1    GEBQ01000954    JAT39023.1    GAMC01006999    GAMC01006998    GAMC01006997    JAB99558.1    GEBQ01012608    JAT27369.1    GEBQ01012415    JAT27562.1    GEBQ01015427    JAT24550.1    CM002916    KMZ07407.1    KMZ07408.1    KMZ07405.1    KMZ07409.1    KMZ07403.1    KMZ07404.1    KMZ07406.1    GBXI01000565    JAD13727.1    CH954184    EDV45201.2    AF005861    AAB81492.1    KQS21442.1    CP012527    ALC48100.1    DS235281    EEB14346.1    BT021263    AAX33411.1    CH480855    EDW52661.1    UFQS01001714    UFQT01001714    SSX11938.1    SSX31485.1    AE014135    AAX53601.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053268    UP000007151    UP000076502    + More
UP000075809    UP000078541    UP000007755    UP000078542    UP000078540    UP000008237    UP000005205    UP000005203    UP000053825    UP000078492    UP000053097    UP000000311    UP000053105    UP000215335    UP000002358    UP000015103    UP000192221    UP000007819    UP000007266    UP000002282    UP000008711    UP000092553    UP000009046    UP000001292    UP000078200    UP000000803   

PRIDE

H9J4Z1    O16056    Q5BIG1    Q59DP4   

Pfam

PF00412   LIM

Interpro

IPR001781   Znf_LIM       

ProteinModelPortal

H9J4Z1   A0A2A4JQ30   A0A2A4JQX5   A0A2H1W3M6   A0A3S2L9N7   A0A0N1IN34   + More
A0A212ES59   A0A310S936   A0A154PH31   A0A151WEM0   A0A195FH09   F4WEA4   A0A151ILQ7   A0A151I1A4   E2C1L4   A0A158N9E7   A0A088AF55   A0A0L7QYJ6   A0A151IUM6   A0A026X480   E2A256   A0A0M9ACF3   A0A0T6BHA7   A0A232FHR6   K7IUC4   A0A0C9R6E0   A0A161MJD7   T1HJN0   A0A0K8TYV6   A0A0K8WAU4   A0A0K8TY27   A0A1W4W145   A0A1W4WBT9   J9JQA5   R4WPQ9   D6WYU2   A0A0A9YKB1   O16057   B4PW53   A0A0R1ECY2   A0A034VCD1   A0A034VDZ5   A0A034VB88   A0A034VB84   A0A034VB80   A0A034VCD3   A0A1B6G5H1   A0A1B6GX06   A0A1B6J0U7   A0A1B6EKK1   W8BE50   A0A1B6FLG3   W8C1E7   A0A1B6MSZ5   W8BRQ5   A0A1B6LUN2   A0A1B6LV49   A0A1B6LLE5   A0A0J9S196   A0A0J9S1G0   A0A0J9S2Z4   A0A0J9S1F7   A0A0A1XRX3   B3P9N8   O16056   A0A0Q5SDX6   A0A0M4F7E1   E0VLU0   Q5BIG1   B4IKS1   A0A336L4I9   A0A1A9V0A0   Q59DP4  

KEGG

101742771    no KO assigned | (RefSeq) protein-methionine sulfoxide oxidase mical3a

GO

GO:0046872   GO:0016874   GO:0005886   GO:0016709   GO:0015629   GO:0051015   GO:0055114   GO:0030042   GO:0030835   GO:0051017  

Length:

234

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03091

outside

1  -  234

 

 

Pi

264.432498

Theta

220.525851

Tajima's D

0.199803

CLR

0.210272

CSRT

0.425678716064197

Interpretation

Uncertain