Gene

KWMTBOMO16049

Pre Gene Modal

BGIBMGA004563

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]

Location

Bomo_Chr27(+):7566480-7567856      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.986

CDS

ATGTATATTTCAGCTTCAATCGCAACCCTACCGGTGGCTCCTGCCTGTCTTATATCTGGATGGATATTTGAAAGATTTGGAAGAAGACCAGCTCTATTCATCACATGTGCCCCGTTTCTACTTGGATGGGCTCTCATAATAAAAGCAAACAACCTCACCCTCATGCTGTGCGGTAGATTTTTCACAGGGATGTGCACAGGATTGATAGGTCCTTTGGCATCGGTCTACATAGGAGAAACTACGGAACCGAAGTATAGAGGTCTCTTCCTCGCTGCCATTTCATTAGCAATGGCATCAGGAATGTTTTTCTCGCATATTATCGGCACATTTATATCATGGCAGTGGACTGCAGTCATCTGCGCTCTGTTGCCAATATTAAGTCTAGTTTTACTAGTTTTTGTACCAGAATCTCCCACTTGGTTAATATCAAGAGGTCACATTGAGGAGGGTGCCAAGGTTTTTTACTGGTTAAGAGGGTATAGTGATGAAGCCAAAGATGAATTGAAAGATATAATCGATCGTAAATTAGCAAACGATGATGCCCCAGTAGAAACTTGGAAAGACAAAATTCGTTATTATAAATGCCCGGAATTTATAAAGCCGTTAGTGATTATGATATTCTTTTTCTCAATGTCCCAATTTGCCGGCGCAAATGCAGTTGCTTTCTATTCTGTTGAAATTATCAAAAAGGCTTTAGGAAAAGATATTGATCAATATATGGCGATGCTCCTAATAGATTTTCTGAGATTGTTAGCGTCAGTAGCAGCCTGTATCATATGCAAACAATACGGGCGAAGACCTGTATGTTTTGTTAGCGGAGGCTTGACAACAATTTCAATGGCAGGACTATCAATATTTTTGTATCTGAGACCAGAAAATATGGCTTGGATACCCCTATCATGCTTCATGCTCTACATTTGTGCGATTTCAATTGGTCTAGTTCCGTTGCCCTGGATGATGTGTGGGGAGATATTTCCGACTAAGGTTCGAGGCTTAGGTTCGGGAGTTAGTTCAGCTGTGGGTTTGGTCTCTGTATTTGTAGTAGTTAAAACCGCACCAGGCATGATGTCTCACTTGGGACAAGTGTTTACTTTCTCGTTTTACGGAGCGATCGCCTTTATTGGAAGCATCATATTATTCTTTGTTCTCCCCGAGACCAAGGGAAGGAGTCTACAGGAGATTGAAGACAAATTTAAAAATCAAAAGAGTAATGGCTCAAAGTTTTGA

Protein

MYISASIATLPVAPACLISGWIFERFGRRPALFITCAPFLLGWALIIKANNLTLMLCGRFFTGMCTGLIGPLASVYIGETTEPKYRGLFLAAISLAMASGMFFSHIIGTFISWQWTAVICALLPILSLVLLVFVPESPTWLISRGHIEEGAKVFYWLRGYSDEAKDELKDIIDRKLANDDAPVETWKDKIRYYKCPEFIKPLVIMIFFFSMSQFAGANAVAFYSVEIIKKALGKDIDQYMAMLLIDFLRLLASVAACIICKQYGRRPVCFVSGGLTTISMAGLSIFLYLRPENMAWIPLSCFMLYICAISIGLVPLPWMMCGEIFPTKVRGLGSGVSSAVGLVSVFVVVKTAPGMMSHLGQVFTFSFYGAIAFIGSIILFFVLPETKGRSLQEIEDKFKNQKSNGSKF

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9J4X3   H9J4X2   E0X906   A0A0N1IPZ8   A0A194QJ63   A0A212FCB5   + More
H9J4X4   A0A2A4JU31   A0A2H1WFM1   A0A3S2NLE7   A0A2W1BDG5   A0A0L7KM51   A0A1L8DF47   A0A1L8DFA5   A0A1B0CWH0   A0A1B0DPM5   A0A139WGJ0   Q17LS5   A0A182WKH8   A0A182U3G7   A0A182MLS9   A0A182GCQ0   A0A182HWW7   A0A182PHI4   A0A182GTB3   A0A182XN09   A0A1L8DDP6   A0A1L8DDS7   Q7Q6Y6   A0A1S4GQI2   A0A182LJ94   A0A182VI49   A0A182KD28   A0A2P8YLG4   B0W5I2   A0A182NHP5   A0A182IUY7   A0A182Y162   A0A182RRX2   U4UB37   B0W5I1   A0A084VC86   A0A182QST8   A0A194QEH9   A0A1S3CXC8   A0A0A8J8L7   A0A182FDK9   A0A194R9K8   W5JEJ5   A0A2J7RF76   A0A2J7RF66   A0A336MJD0   A0A336M7L2   H9IV67   N6UG74   A0A067QTU4   A0A212ENJ2   A0A1S3CXE4   A0A0L7L7N1   A0A1J1IVY8   A0A2A4IVM9   D4AHX7   A0A336MDU0   A0A1B6CYD7   V9I993   A0A0L7LRT2   V9IBH4   A0A212F9B1   H9J4X7   A0A088AM86   A0A0L7RCV8   V9I974   A0A0N1IPS2   A0A2A3EIY5   A0A2H1V7H3   A0A194QHU0   A0A067RPD0   E2C3F3   A0A2P8XGE2   A0A154P1X7   A0A310SDF5   A0A2A4JTG8   A0A2J7RDW9   A0A2J7RDW1   A0A1B6GJS3   E2ALH5   A0A023PNK9   A0A1B6MC78   A0A151WZ42   K7J6E5   A0A1B6J3Z0   A0A0N1I9K7   A0A232ESL4   T1I127   F4X525   A0A1L8DF63   A0A0N7Z8N1   A0A195EZV9   A0A212F9C9   A0A2H1WF43  

Pubmed

19121390    26354079    22118469    28756777    26227816    18362917    + More
19820115    17510324    26483478    12364791    20966253    29403074    25244985    23537049    24438588    20920257    23761445    24845553    20705135    20798317    24730650    20075255    28648823    21719571    27129103   

EMBL

BABH01025723    BABH01025724    GQ871756    ADM86147.1    KQ460077    KPJ17883.1    + More
KQ458671    KPJ05557.1    AGBW02009205    OWR51386.1    NWSH01000578    PCG75535.1    ODYU01008354    SOQ51878.1    RSAL01000045    RVE50591.1    KZ150249    PZC71834.1    JTDY01008796    KOB64392.1    GFDF01009026    JAV05058.1    GFDF01009027    JAV05057.1    AJWK01032461    AJVK01008157    KQ971345    KYB27009.1    CH477213    EAT47626.1    AXCM01002831    JXUM01009472    KQ560284    KXJ83288.1    APCN01001553    JXUM01086634    KQ563580    KXJ73638.1    GFDF01009485    JAV04599.1    GFDF01009486    JAV04598.1    AAAB01008960    EAA11457.4    PYGN01000511    PSN45090.1    DS231843    EDS35465.1    KB632225    ERL90272.1    EDS35464.1    ATLV01010625    KE524589    KFB35580.1    AXCN02000368    KQ459299    KPJ01871.1    AB901078    BAQ02378.1    KQ460761    KPJ12541.1    ADMH02001735    ETN61249.1    NEVH01004413    PNF39486.1    PNF39483.1    UFQT01001316    SSX30005.1    UFQT01000224    SSX22028.1    BABH01000587    APGK01036695    APGK01036696    KB740941    ENN77647.1    KK853474    KDR07368.1    AGBW02013662    OWR43027.1    JTDY01002470    KOB71349.1    CVRI01000059    CRL03302.1    NWSH01006268    PCG63546.1    AB550005    BAI83426.1    UFQT01001016    SSX28504.1    GEDC01018890    JAS18408.1    JR037229    AEY57650.1    JTDY01000230    KOB78170.1    JR037228    AEY57649.1    AGBW02009614    OWR50324.1    BABH01025717    KQ414615    KOC68688.1    JR037227    AEY57648.1    KPJ17881.1    KZ288248    PBC31149.1    ODYU01001065    SOQ36788.1    KQ458981    KPJ04505.1    KK852548    KDR21599.1    GL452320    EFN77491.1    PYGN01002224    PSN31080.1    KQ434796    KZC05843.1    KQ762882    OAD55364.1    NWSH01000704    PCG74682.1    NEVH01005280    PNF39024.1    PNF39025.1    GECZ01007067    JAS62702.1    GL440607    EFN65733.1    KJ439227    KZ150491    AHX25878.1    PZC70688.1    GEBQ01006488    JAT33489.1    KQ982649    KYQ52971.1    GECU01013815    JAS93891.1    KPJ17880.1    NNAY01002414    OXU21332.1    ACPB03016561    GL888680    EGI58482.1    GFDF01009003    JAV05081.1    GDKW01002883    JAI53712.1    KQ981905    KYN33447.1    OWR50323.1    ODYU01008270    SOQ51705.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000218220    UP000283053    + More
UP000037510    UP000092461    UP000092462    UP000007266    UP000008820    UP000075920    UP000075902    UP000075883    UP000069940    UP000249989    UP000075840    UP000075885    UP000076407    UP000007062    UP000075882    UP000075903    UP000075881    UP000245037    UP000002320    UP000075884    UP000075880    UP000076408    UP000075900    UP000030742    UP000030765    UP000075886    UP000079169    UP000069272    UP000000673    UP000235965    UP000019118    UP000027135    UP000183832    UP000005203    UP000053825    UP000242457    UP000008237    UP000076502    UP000000311    UP000075809    UP000002358    UP000215335    UP000015103    UP000007755    UP000078541   

PRIDE

H9J4X3    H9J4X2    E0X906    H9J4X4    H9IV67    H9J4X7    + More

Pfam

PF00083   Sugar_tr

Interpro

IPR036259   MFS_trans_sf        + More
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR003663   Sugar/inositol_transpt       
IPR005828   MFS_sugar_transport-like       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9J4X3   H9J4X2   E0X906   A0A0N1IPZ8   A0A194QJ63   A0A212FCB5   + More
H9J4X4   A0A2A4JU31   A0A2H1WFM1   A0A3S2NLE7   A0A2W1BDG5   A0A0L7KM51   A0A1L8DF47   A0A1L8DFA5   A0A1B0CWH0   A0A1B0DPM5   A0A139WGJ0   Q17LS5   A0A182WKH8   A0A182U3G7   A0A182MLS9   A0A182GCQ0   A0A182HWW7   A0A182PHI4   A0A182GTB3   A0A182XN09   A0A1L8DDP6   A0A1L8DDS7   Q7Q6Y6   A0A1S4GQI2   A0A182LJ94   A0A182VI49   A0A182KD28   A0A2P8YLG4   B0W5I2   A0A182NHP5   A0A182IUY7   A0A182Y162   A0A182RRX2   U4UB37   B0W5I1   A0A084VC86   A0A182QST8   A0A194QEH9   A0A1S3CXC8   A0A0A8J8L7   A0A182FDK9   A0A194R9K8   W5JEJ5   A0A2J7RF76   A0A2J7RF66   A0A336MJD0   A0A336M7L2   H9IV67   N6UG74   A0A067QTU4   A0A212ENJ2   A0A1S3CXE4   A0A0L7L7N1   A0A1J1IVY8   A0A2A4IVM9   D4AHX7   A0A336MDU0   A0A1B6CYD7   V9I993   A0A0L7LRT2   V9IBH4   A0A212F9B1   H9J4X7   A0A088AM86   A0A0L7RCV8   V9I974   A0A0N1IPS2   A0A2A3EIY5   A0A2H1V7H3   A0A194QHU0   A0A067RPD0   E2C3F3   A0A2P8XGE2   A0A154P1X7   A0A310SDF5   A0A2A4JTG8   A0A2J7RDW9   A0A2J7RDW1   A0A1B6GJS3   E2ALH5   A0A023PNK9   A0A1B6MC78   A0A151WZ42   K7J6E5   A0A1B6J3Z0   A0A0N1I9K7   A0A232ESL4   T1I127   F4X525   A0A1L8DF63   A0A0N7Z8N1   A0A195EZV9   A0A212F9C9   A0A2H1WF43  

PDB

4LDS     E-value=9.79403e-24,     Score=273

KEGG

101743529    no KO assigned | (RefSeq) facilitated trehalose transporter Tret1-2 homolog

GO

GO:0022857   GO:0016021   GO:0008643   GO:0005351   GO:0005887   GO:0005215   GO:0016020   GO:0022891   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259   GO:0055085  

Length:

408

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

236.3346

Exp number, first 60 AAs:

40.61484

Total prob of N-in:

0.06413

POSSIBLE N-term signal

sequence

outside

1  -  3

TMhelix

4  -  23

inside

24  -  29

TMhelix

30  -  47

outside

48  -  59

TMhelix

60  -  78

inside

79  -  84

TMhelix

85  -  107

outside

108  -  111

TMhelix

112  -  134

inside

135  -  200

TMhelix

201  -  223

outside

224  -  237

TMhelix

238  -  260

inside

261  -  266

TMhelix

267  -  289

outside

290  -  293

TMhelix

294  -  316

inside

317  -  328

TMhelix

329  -  351

outside

352  -  360

TMhelix

361  -  383

inside

384  -  408

 

 

Pi

379.492678

Theta

212.127066

Tajima's D

2.484028

CLR

3.718326

CSRT

0.942502874856257

Interpretation

Uncertain