Gene

KWMTBOMO16047

Pre Gene Modal

BGIBMGA004561

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Bombyx_mori]

Location

Bomo_Chr27(+):7505064-7513731      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.962

CDS

ATGGTGAGATGGATCACGCCATTTGTGAAGCAGTGCTTCGTAACATCCGGTGTGGCTATCAGCATGGCGCAGTTCGGTCTCGTCTTTGGTATCACCGCGATCCTGATACCGCAGCTGCAGTCACAAAAACCTGTAATGCTGATCGACGAATCCACCGAGTCTTGGATAGCTGCTATACCTGGTTTCGCGCTGTTATTTGGTAACTTCACTATACCTACCATCATGGGCAAATATGGACGAAAAGTCGCCAACATCATCAGTGTTCTGCCCGTAATCGTCGGCTGGCTGTTAATCACAAGCGCCTCCAACACATACTTCATCTTGGCTGCAAGATTTCTTCAAGGGATCTCTATGGGAATGAGCACATCATTGGGACCGATCTTGATTGGCGAATACACCAGCCCAAAGTACCGTGGAGCGTTTTTATCGAGTCTTTGCTTAGTTATGGCGATGGCTACTTTGACGGTGCATTCTGTCGGCTCATATGTGACATGGCAATGGACTGCCTTCGTGTGTTCAGTAATAACTTTCATAGATTTATTAATTGTAATTAATTCTCCTGAATCACCTAGTTGGTTGGCCGATCAAGGGAAATATGAAGACTGCAGAAAAGTGTTTATTTGGTTGCGGGGTGATACCGAAAATGAGGAATTAGAGAAAATGATTGAGGCTAGCAAAATTGTTAGGGAGTCTAAAGCAGACGTCGTCATATCAGATACGTTCGTTAAAAATCTTAAAGCCAAATTTGCTGTTGGATTCGAAGCGTTAAGACGAAAAGAGTTTTACAAACCGATATTCGTAATGGTTCACGTTTATACTTTAGGTGAATGGGCAGGGATCAATATCCTTTCCCCTTATATCGTTGAGGTTGCAGAAGCTCTTGTAGACAAAGACAAAATGAATGTACCATTATTGGTAGTGACCGTAGATGCTCAGAGAATAATTATGAACGCTGCTGCAATATATTTTATGACAAAATTTAGACGGAGAGTAATTCTGATAAGTACAACAATGCTTTGCGTCGCTGTTTTGCTTCTTATTTCAGCTTACAGTTACGCCAAAACGTCAAACTTGTTACCATTCGATCATCCGTCCATAGGCGCGATTTTGTTACACGTTCATATGTTCACAATAGCAACAGGTTCGGTGCCCCTACCGATGACAATATCAGGCGAAATATTCCCATTACAATTCCGAAGCGTCTCGGGTGCTTTGAGCGCAGTATTCTTTTCTTTTCATCTCTTCATCACCGTAAAAACATACCGGTATTTACGCAATTCTTTAGGATTACACGGAACGTATTTGATATACGCAGCTATTGTGACTTATTGCTTGGTCGTGAGCTGGATATTTTTACCGGAGACCAAAGACAGGACTCTACAGGAAATTGAAGATGAATTTAGAGGAGGGCCTCCGACGAGGGATAGAGATGAAAATACTGCTGAGATTTTAATGGAGACGAAATAA

Protein

MVRWITPFVKQCFVTSGVAISMAQFGLVFGITAILIPQLQSQKPVMLIDESTESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSYVTWQWTAFVCSVITFIDLLIVINSPESPSWLADQGKYEDCRKVFIWLRGDTENEELEKMIEASKIVRESKADVVISDTFVKNLKAKFAVGFEALRRKEFYKPIFVMVHVYTLGEWAGINILSPYIVEVAEALVDKDKMNVPLLVVTVDAQRIIMNAAAIYFMTKFRRRVILISTTMLCVAVLLLISAYSYAKTSNLLPFDHPSIGAILLHVHMFTIATGSVPLPMTISGEIFPLQFRSVSGALSAVFFSFHLFITVKTYRYLRNSLGLHGTYLIYAAIVTYCLVVSWIFLPETKDRTLQEIEDEFRGGPPTRDRDENTAEILMETK

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9J4X1   A0A212F161   A0A3S2P2D1   A0A0N1IHN6   A0A194QPY2   H9J4R6   + More
A0A2H1WVP2   A0A2W1BG84   A0A2A4KAY2   A0A212FJ74   H9J4S1   A0A194QJ23   H9J4X0   A0A2A4KA42   A0A0L7L8D8   A0A2W1B9E8   A0A2H1V0I3   A0A3S2NWF9   H9J4X7   A0A212F9B1   H9J4W9   H9J525   A0A2A4JT91   A0A0N1IPS2   A0A023PNK9   A0A2A4JTG8   A0A0L7LQ31   A0A3S2LUZ6   A0A194QHU0   A0A2A4J748   A0A2A4JUU3   A0A2W1BD78   A0A2W1BFI0   A0A194QJI7   A0A2H1W936   A0A2H1WFL6   A0A0L7KZR3   A0A2H1WB04   A0A2H1WAU6   A0A0N1I9K7   A0A2A4JSU4   A0A194QKX0   A0A0N1IIX6   A0A194QJ40   A0A0L7L8F3   A0A2A4JU29   A0A212FCC0   H9J4U8   A0A194QJ47   A0A2A4JNG3   H9J4R7   H9J4S0   A0A0N1IG19   A0A2H1W9B8   A0A194QJ30   H9J4T7   E0X905   H9J4X6   A0A194QJJ6   D0PWZ5   A0A2H1X0D6   A0A0L7LRT2   A0A194QJ80   A0A212F9C9   A0A3S2LEF2   A0A212ENJ2   A0A2W1BCE3   A0A194R9K8   A0A194QJ63   A0A2H1WK46   A0A2H1WFM1   A0A2A4KB29   A0A2A4JU31   A0A182Y162   A0A139WGJ0   A0A182WKH8   A0A2W1BDG5   A0A2W1BF54   A0A0L7KM51   A0A3S2NLE7   H9J539   A0A0N1IPZ8   A0A182RRX2   A0A084VC86   H9J4X2   A0A0N0PE20   A0A2A4IVM9   A0A194QEH9   A0A182XN09   A0A182KD28   A0A182MLS9   E0X906   A0A182LJ94   A0A2A4J655   H9J017   A0A182PHI4   A0A182VI49   A0A0L7L7N1   A0A182NHP5  

Pubmed

19121390    22118469    26354079    28756777    26227816    24730650    + More
25244985    18362917    19820115    24438588    20966253   

EMBL

BABH01025731    AGBW02010956    OWR47467.1    RSAL01000045    RVE50592.1    KQ460077    + More
KPJ17887.1    KQ458671    KPJ05561.1    BABH01035548    ODYU01011356    SOQ57052.1    KZ150249    PZC71836.1    NWSH01000008    PCG80953.1    AGBW02008317    OWR53759.1    BABH01035527    BABH01035528    BABH01035529    KPJ05558.1    BABH01025733    PCG80949.1    JTDY01002352    KOB71610.1    PZC71838.1    ODYU01000118    SOQ34347.1    RVE50589.1    BABH01025717    AGBW02009614    OWR50324.1    BABH01038881    NWSH01000704    PCG74683.1    KPJ17881.1    KJ439227    KZ150491    AHX25878.1    PZC70688.1    PCG74682.1    JTDY01000342    KOB77618.1    RSAL01000181    RVE44925.1    KQ458981    KPJ04505.1    NWSH01002771    PCG67556.1    NWSH01000578    PCG75536.1    PZC71835.1    KZ150133    PZC73021.1    KPJ05554.1    ODYU01007122    SOQ49615.1    ODYU01008354    SOQ51875.1    JTDY01004123    KOB68566.1    ODYU01007347    SOQ50032.1    SOQ49614.1    KPJ17880.1    PCG74684.1    KPJ05555.1    KPJ17884.1    KPJ05573.1    KOB71609.1    PCG75537.1    AGBW02009205    OWR51384.1    BABH01035543    KPJ05583.1    NWSH01001042    PCG72950.1    BABH01035544    BABH01035538    BABH01035539    KPJ17891.1    SOQ49613.1    KPJ05563.1    BABH01035469    GQ871755    ADM86146.1    BABH01025720    KPJ05559.1    FJ373021    ACQ66002.1    ODYU01012470    SOQ58795.1    JTDY01000230    KOB78170.1    KPJ05572.1    OWR50323.1    RVE44926.1    AGBW02013662    OWR43027.1    PZC70686.1    KQ460761    KPJ12541.1    KPJ05557.1    ODYU01009098    SOQ53272.1    SOQ51878.1    PCG80950.1    PCG75535.1    KQ971345    KYB27009.1    PZC71834.1    PZC71837.1    JTDY01008796    KOB64392.1    RVE50591.1    BABH01038877    BABH01038878    BABH01038879    BABH01038880    KPJ17883.1    ATLV01010625    KE524589    KFB35580.1    BABH01025724    KQ460126    KPJ17588.1    NWSH01006268    PCG63546.1    KQ459299    KPJ01871.1    AXCM01002831    GQ871756    ADM86147.1    PCG67555.1    BABH01018801    JTDY01002470    KOB71349.1   

Proteomes

UP000005204    UP000007151    UP000283053    UP000053240    UP000053268    UP000218220    + More
UP000037510    UP000076408    UP000007266    UP000075920    UP000075900    UP000030765    UP000076407    UP000075881    UP000075883    UP000075882    UP000075885    UP000075903    UP000075884   

PRIDE

H9J4X1    H9J4R6    H9J4S1    H9J4X0    H9J4X7    H9J4W9    + More
H9J525    H9J4U8    H9J4R7    H9J4S0    H9J4T7    E0X905    H9J4X6    D0PWZ5    H9J539    H9J4X2    E0X906    H9J017   

Pfam

PF00083   Sugar_tr

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR003663   Sugar/inositol_transpt       
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR036259   MFS_trans_sf       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9J4X1   A0A212F161   A0A3S2P2D1   A0A0N1IHN6   A0A194QPY2   H9J4R6   + More
A0A2H1WVP2   A0A2W1BG84   A0A2A4KAY2   A0A212FJ74   H9J4S1   A0A194QJ23   H9J4X0   A0A2A4KA42   A0A0L7L8D8   A0A2W1B9E8   A0A2H1V0I3   A0A3S2NWF9   H9J4X7   A0A212F9B1   H9J4W9   H9J525   A0A2A4JT91   A0A0N1IPS2   A0A023PNK9   A0A2A4JTG8   A0A0L7LQ31   A0A3S2LUZ6   A0A194QHU0   A0A2A4J748   A0A2A4JUU3   A0A2W1BD78   A0A2W1BFI0   A0A194QJI7   A0A2H1W936   A0A2H1WFL6   A0A0L7KZR3   A0A2H1WB04   A0A2H1WAU6   A0A0N1I9K7   A0A2A4JSU4   A0A194QKX0   A0A0N1IIX6   A0A194QJ40   A0A0L7L8F3   A0A2A4JU29   A0A212FCC0   H9J4U8   A0A194QJ47   A0A2A4JNG3   H9J4R7   H9J4S0   A0A0N1IG19   A0A2H1W9B8   A0A194QJ30   H9J4T7   E0X905   H9J4X6   A0A194QJJ6   D0PWZ5   A0A2H1X0D6   A0A0L7LRT2   A0A194QJ80   A0A212F9C9   A0A3S2LEF2   A0A212ENJ2   A0A2W1BCE3   A0A194R9K8   A0A194QJ63   A0A2H1WK46   A0A2H1WFM1   A0A2A4KB29   A0A2A4JU31   A0A182Y162   A0A139WGJ0   A0A182WKH8   A0A2W1BDG5   A0A2W1BF54   A0A0L7KM51   A0A3S2NLE7   H9J539   A0A0N1IPZ8   A0A182RRX2   A0A084VC86   H9J4X2   A0A0N0PE20   A0A2A4IVM9   A0A194QEH9   A0A182XN09   A0A182KD28   A0A182MLS9   E0X906   A0A182LJ94   A0A2A4J655   H9J017   A0A182PHI4   A0A182VI49   A0A0L7L7N1   A0A182NHP5  

PDB

4LDS     E-value=5.26688e-17,     Score=216

KEGG

101743668    no KO assigned | (RefSeq) facilitated trehalose transporter Tret1-like

GO

GO:0022857   GO:0016021   GO:0008643   GO:0005351   GO:0005887   GO:0005215   GO:0016020   GO:0022891   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259   GO:0055085  

Length:

488

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

249.22362

Exp number, first 60 AAs:

29.53383

Total prob of N-in:

0.99278

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  54

TMhelix

55  -  72

inside

73  -  84

TMhelix

85  -  107

outside

108  -  111

TMhelix

112  -  130

inside

131  -  136

TMhelix

137  -  159

outside

160  -  162

TMhelix

163  -  185

inside

186  -  264

TMhelix

265  -  287

outside

288  -  301

TMhelix

302  -  324

inside

325  -  330

TMhelix

331  -  353

outside

354  -  362

TMhelix

363  -  385

inside

386  -  397

TMhelix

398  -  417

outside

418  -  429

TMhelix

430  -  452

inside

453  -  488

 

 

Pi

44.18326

Theta

43.538166

Tajima's D

-1.515692

CLR

100.416595

CSRT

0.0604469776511174

Interpretation

Uncertain