Gene

KWMTBOMO16046

Pre Gene Modal

BGIBMGA004560

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-2_homolog_[Papilio_polytes]

Location

Bomo_Chr27(+):7480504-7496988      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.988

CDS

ATGGCGGCCGCGGGCCTCGTGATGGGTTTTACCACAGGCCTCTTGGAACAGCTGGGGGCACCAGACTCTCCCATACCTGTCGACGATGCTTCAGGATCCTGGATAGCGGCCATTCCAGGATTCTCGTTGGTCGTGGGAAACTTCATCGTTCCCTCGGTTATGGCGAGATACGGAAGGAAAACAGCAAATCTGATCAGCATCGTGCCCCTTATAATTGGCTGGATCGGCATAGTGTTGGCAAACAGCATCACAGCTCTATTCATAGCCAGATTCTTGCAAGGTCTGTGCATGGGCATGGCCACATCACTGGGTTCCACTTTGATCGGTGAATACGCAAGTCCAAGAAACCGTGGAGTGTTTTTAATGACAATATCCATTTCTATAGCCTTTGGAGTGCTTTGCGTTCACGCCATGGGCTCGTATCTGGACTGGAAAACATCTGCAATAGTGTGTGGTTCTGTAGCTTTAATAGATTTGGTCATTGTGATATTTTCTCCGGAGTCGCCTAGTTGGTTAGCCGACCAAGGAAAGTACGATGAGTGTAAGAAAGTCTTCAGATGGCTCCGCGGAACTAAGGAGGAACAAGAGTTAAAAAATTTAATCGAAGCCAGCATTATAGTGAGAGAATCGAAAGCGGAAGCAAATGTGAGACGGACTCTCTTGAAGAAAATCAAAAGTAATGTAGTCTATTTTAAGACAACGATTACAAAGAAGGAGTTCTTCAAACCAATCTTCATAATGATACACATATACATGATAGGGCAGTGGAGTGGTGTAAACATTCTTGTAACGTATTCAATAGTAATATTCAACAGAGTCGTTGGACCGGATTGTAATATTCCCTTAATGATTATGGCTTTGGACGGCCACAGGATAATCGCTAATATATTTGCTATTTACATAATTAAGAAAGCAAAAAGACGGACAATGCTGTTTACCACGGTTGGAATTAATGTTTTGGCTTTATTGGGATTAGCAGCGTATACTTATGCCAAAGAGAACCGTTTGCTTAACACCGATTATCCAATTATAGGAATTCTGCTGATACATTTATTGATGTTCGCGGTCGCAACGGGAACTATATCCCTTTGTTTCATTATAGCCGGTGAGATATTTCCATTGGAATACAGGAGTTTAGCCGGCGGCTTAAGCGTATTGTTTTATTCGGCAAACCTTTTTTTAAACGTCAAAACTATACCATATCTGTTGAACAACATCGGCGTACACGGCACGTGCTGTTTGTATTGCGTTGTTATATTATATTGTTTGTTGATTGCTTGGTGGTTCCTACCTGAAACGAAAGATAGGACTCTTCAAGATATTGAAGATGAGTTTAGAGGGAGACCAATGACGATGGAAGAGTTGAAATCGGCCCAATCATTGGCATCCTGGAAGGCCTATAACACAGACAGAAGATGCAGTACGCCGGTCGTATAA

Protein

MAAAGLVMGFTTGLLEQLGAPDSPIPVDDASGSWIAAIPGFSLVVGNFIVPSVMARYGRKTANLISIVPLIIGWIGIVLANSITALFIARFLQGLCMGMATSLGSTLIGEYASPRNRGVFLMTISISIAFGVLCVHAMGSYLDWKTSAIVCGSVALIDLVIVIFSPESPSWLADQGKYDECKKVFRWLRGTKEEQELKNLIEASIIVRESKAEANVRRTLLKKIKSNVVYFKTTITKKEFFKPIFIMIHIYMIGQWSGVNILVTYSIVIFNRVVGPDCNIPLMIMALDGHRIIANIFAIYIIKKAKRRTMLFTTVGINVLALLGLAAYTYAKENRLLNTDYPIIGILLIHLLMFAVATGTISLCFIIAGEIFPLEYRSLAGGLSVLFYSANLFLNVKTIPYLLNNIGVHGTCCLYCVVILYCLLIAWWFLPETKDRTLQDIEDEFRGRPMTMEELKSAQSLASWKAYNTDRRCSTPVV

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9J4X0   A0A194QPY2   A0A0N1IHN6   A0A2H1WVP2   A0A2A4KA42   H9J4R6   + More
A0A2W1BG84   A0A2A4KAY2   A0A3S2P2D1   A0A212FJ74   A0A0L7L8D8   A0A212F161   A0A2W1B9E8   A0A2H1V0I3   A0A194QJ23   H9J4S1   A0A0L7LQ31   H9J4X1   A0A3S2NWF9   A0A2W1BD78   A0A2A4JTG8   H9J4X7   A0A023PNK9   A0A2A4JUU3   A0A2H1WFL6   A0A194QHU0   A0A0N1IPS2   A0A2H1W936   A0A0N1I9K7   A0A3S2LUZ6   H9J4W9   A0A194QJI7   A0A212F9B1   A0A194QJ40   H9J525   A0A0L7KZR3   A0A2A4J748   A0A2A4JT91   A0A194QKX0   A0A2A4JU29   A0A2H1WB04   A0A212FCC0   A0A2A4JSU4   A0A0L7L8F3   A0A2W1BFI0   A0A0N1IIX6   H9J4U8   A0A2H1WAU6   A0A194QJ47   H9J4S0   D0PWZ5   A0A2H1W9B8   E0X905   H9J4T7   A0A2A4JNG3   A0A0N1IG19   A0A194QJ30   A0A0L7LRT2   H9J4R7   A0A212F9C9   H9J4X6   A0A194QJJ6   A0A2H1X0D6   A0A194QJ80   A0A3S2LEF2   E0X906   H9J4X2   A0A2A4J655   A0A212FPF6   H9J017   A0A194QKY0   A0A0N0PE20   A0A2H1WKZ9   A0A0N1IPZ8   A0A194QJ63   A0A2W1BDG5   A0A194R9K8   A0A2H1WK46   H9J4X3   A0A212ENJ2   A0A194QEH9   A0A1B0DPM5   H9J539   A0A2W1BF54   A0A2A4JU31   A0A1B0CWH0   A0A182WKH8   A0A2A4KB29   A0A0L7KM51   A0A182RRX2   A0A1L8DF47   A0A2H1WFM1   A0A1L8DFA5   A0A139WGJ0   A0A2H1WX63   A0A182MLS9   A0A067QTU4  

Pubmed

19121390    26354079    28756777    22118469    26227816    24730650    + More
18362917    19820115    24845553   

EMBL

BABH01025733    KQ458671    KPJ05561.1    KQ460077    KPJ17887.1    ODYU01011356    + More
SOQ57052.1    NWSH01000008    PCG80949.1    BABH01035548    KZ150249    PZC71836.1    PCG80953.1    RSAL01000045    RVE50592.1    AGBW02008317    OWR53759.1    JTDY01002352    KOB71610.1    AGBW02010956    OWR47467.1    PZC71838.1    ODYU01000118    SOQ34347.1    KPJ05558.1    BABH01035527    BABH01035528    BABH01035529    JTDY01000342    KOB77618.1    BABH01025731    RVE50589.1    PZC71835.1    NWSH01000704    PCG74682.1    BABH01025717    KJ439227    KZ150491    AHX25878.1    PZC70688.1    NWSH01000578    PCG75536.1    ODYU01008354    SOQ51875.1    KQ458981    KPJ04505.1    KPJ17881.1    ODYU01007122    SOQ49615.1    KPJ17880.1    RSAL01000181    RVE44925.1    KPJ05554.1    AGBW02009614    OWR50324.1    KPJ05573.1    BABH01038881    JTDY01004123    KOB68566.1    NWSH01002771    PCG67556.1    PCG74683.1    KPJ05555.1    PCG75537.1    ODYU01007347    SOQ50032.1    AGBW02009205    OWR51384.1    PCG74684.1    KOB71609.1    KZ150133    PZC73021.1    KPJ17884.1    BABH01035543    SOQ49614.1    KPJ05583.1    BABH01035538    BABH01035539    FJ373021    ACQ66002.1    SOQ49613.1    GQ871755    ADM86146.1    BABH01035469    NWSH01001042    PCG72950.1    KPJ17891.1    KPJ05563.1    JTDY01000230    KOB78170.1    BABH01035544    OWR50323.1    BABH01025720    KPJ05559.1    ODYU01012470    SOQ58795.1    KPJ05572.1    RVE44926.1    GQ871756    ADM86147.1    BABH01025724    PCG67555.1    AGBW02002687    OWR55626.1    BABH01018801    KPJ05560.1    KQ460126    KPJ17588.1    ODYU01009373    SOQ53753.1    KPJ17883.1    KPJ05557.1    PZC71834.1    KQ460761    KPJ12541.1    ODYU01009098    SOQ53272.1    BABH01025723    AGBW02013662    OWR43027.1    KQ459299    KPJ01871.1    AJVK01008157    BABH01038877    BABH01038878    BABH01038879    BABH01038880    PZC71837.1    PCG75535.1    AJWK01032461    PCG80950.1    JTDY01008796    KOB64392.1    GFDF01009026    JAV05058.1    SOQ51878.1    GFDF01009027    JAV05057.1    KQ971345    KYB27009.1    ODYU01011726    SOQ57638.1    AXCM01002831    KK853474    KDR07368.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000283053    UP000007151    + More
UP000037510    UP000092462    UP000092461    UP000075920    UP000075900    UP000007266    UP000075883    UP000027135   

PRIDE

H9J4X0    H9J4R6    H9J4S1    H9J4X1    H9J4X7    H9J4W9    + More
H9J525    H9J4U8    H9J4S0    D0PWZ5    E0X905    H9J4T7    H9J4R7    H9J4X6    E0X906    H9J4X2    H9J017    H9J4X3    H9J539   

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1

Interpro

IPR005829   Sugar_transporter_CS        + More
IPR003663   Sugar/inositol_transpt       
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
IPR005828   MFS_sugar_transport-like       
IPR011701   MFS       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9J4X0   A0A194QPY2   A0A0N1IHN6   A0A2H1WVP2   A0A2A4KA42   H9J4R6   + More
A0A2W1BG84   A0A2A4KAY2   A0A3S2P2D1   A0A212FJ74   A0A0L7L8D8   A0A212F161   A0A2W1B9E8   A0A2H1V0I3   A0A194QJ23   H9J4S1   A0A0L7LQ31   H9J4X1   A0A3S2NWF9   A0A2W1BD78   A0A2A4JTG8   H9J4X7   A0A023PNK9   A0A2A4JUU3   A0A2H1WFL6   A0A194QHU0   A0A0N1IPS2   A0A2H1W936   A0A0N1I9K7   A0A3S2LUZ6   H9J4W9   A0A194QJI7   A0A212F9B1   A0A194QJ40   H9J525   A0A0L7KZR3   A0A2A4J748   A0A2A4JT91   A0A194QKX0   A0A2A4JU29   A0A2H1WB04   A0A212FCC0   A0A2A4JSU4   A0A0L7L8F3   A0A2W1BFI0   A0A0N1IIX6   H9J4U8   A0A2H1WAU6   A0A194QJ47   H9J4S0   D0PWZ5   A0A2H1W9B8   E0X905   H9J4T7   A0A2A4JNG3   A0A0N1IG19   A0A194QJ30   A0A0L7LRT2   H9J4R7   A0A212F9C9   H9J4X6   A0A194QJJ6   A0A2H1X0D6   A0A194QJ80   A0A3S2LEF2   E0X906   H9J4X2   A0A2A4J655   A0A212FPF6   H9J017   A0A194QKY0   A0A0N0PE20   A0A2H1WKZ9   A0A0N1IPZ8   A0A194QJ63   A0A2W1BDG5   A0A194R9K8   A0A2H1WK46   H9J4X3   A0A212ENJ2   A0A194QEH9   A0A1B0DPM5   H9J539   A0A2W1BF54   A0A2A4JU31   A0A1B0CWH0   A0A182WKH8   A0A2A4KB29   A0A0L7KM51   A0A182RRX2   A0A1L8DF47   A0A2H1WFM1   A0A1L8DFA5   A0A139WGJ0   A0A2H1WX63   A0A182MLS9   A0A067QTU4  

PDB

6H7D     E-value=2.6361e-09,     Score=149

KEGG

101743817    no KO assigned | (RefSeq) facilitated trehalose transporter Tret1-like

GO

GO:0022857   GO:0016021   GO:0008643   GO:0005351   GO:0005887   GO:0016020   GO:0022891   GO:0005215   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259   GO:0055085  

Length:

478

Number of predicted TMHs:

9

Exp number of AAs in TMHs:

226.1666

Exp number, first 60 AAs:

22.27044

Total prob of N-in:

0.05163

POSSIBLE N-term signal

sequence

outside

1  -  31

TMhelix

32  -  54

inside

55  -  66

TMhelix

67  -  89

outside

90  -  119

TMhelix

120  -  142

inside

143  -  247

TMhelix

248  -  270

outside

271  -  279

TMhelix

280  -  302

inside

303  -  308

TMhelix

309  -  331

outside

332  -  345

TMhelix

346  -  368

inside

369  -  380

TMhelix

381  -  403

outside

404  -  406

TMhelix

407  -  429

inside

430  -  478

 

 

Pi

234.625322

Theta

146.397895

Tajima's D

1.916937

CLR

0.014782

CSRT

0.867206639668017

Interpretation

Uncertain