Gene

KWMTBOMO16045

Pre Gene Modal

BGIBMGA004559

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-2_homolog_[Papilio_polytes]

Location

Bomo_Chr27(+):7463654-7474316      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.57

CDS

ATGGCGTGCTACGGATTCAGCCCTTTTTGTAGACAGTGTTTTGTCGTGATCGGCGTATCAATAAACCTATCGCAGTACGGGATGGTCTTCGGATTCACTGGACTGTTACTTCCTCAGCTGCAAGACCCTGCTTCGTCGGTGACCATTGATCAAGGCGGCGCGTCATGGATAGCTGCCCTGCCCAGCCTCGGTCTTCTTGTGGGGAACATGATAATTCCGACCATAATGGGAAATTTGGGAAGAAAGCGCGCCAATATAATCAGCATCACGATCATGACTGTGTGCTGGAGCTGTATAATTATCGCCAACAATCTTACCACAATCCTCATCGTGAGGTTCTTCCAAGGTGTCTCGTTAGGCATGGTGTAA

Protein

MACYGFSPFCRQCFVVIGVSINLSQYGMVFGFTGLLLPQLQDPASSVTIDQGGASWIAALPSLGLLVGNMIIPTIMGNLGRKRANIISITIMTVCWSCIIIANNLTTILIVRFFQGVSLGMV

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9J4W9   A0A3S2NWF9   H9J4X1   A0A3S2P2D1   H9J4S1   A0A212F161   + More
A0A2H1WVP2   A0A2W1BG84   A0A2A4KAY2   A0A194QJ23   A0A2W1B9E8   A0A2A4KA42   H9J4R6   A0A0N1IHN6   A0A194QPY2   A0A3S2LUZ6   A0A0N1IPZ0   A0A0N1IIX6   A0A212F9B1   A0A2A4JSU4   A0A212FJ74   A0A2H1WB04   A0A0N1IPS2   A0A194QJ40   A0A2A4J748   A0A2W1BFI0   A0A2H1WAU6   H9J4X0   A0A2H1WFL6   A0A0N0PDT5   H9J525   A0A194QJI7   A0A2A4JT91   A0A2H1W936   A0A2A4JTG8   A0A2W1BCE3   A0A023PNK9   A0A2W1BD78   H9J4X7   A0A194QHU0   A0A194QKX0   A0A0L7KZR3   A0A182LJ94   A0A2A4JUU3   A0A2A4JNG3   A0A182XN09   A0A0N1IG19   A0A182VI49   A0A182RRX2   A0A182KD28   A0A182WKH8   A0A182IUY7   A0A182Y162   A0A182FDK9   A0A182MLS9   A0A182PHI4   W5JEJ5   A0A194QJJ6   A0A084VC86   H9J4R7   A0A182NHP5   A0A182QST8   V9I974   A0A2A3EIY5   A0A0M9AB14   A0A195DNJ4   A0A088AM86   T1DI16   A0A195BPU7   A0A158P3D0   A0A154P1X7   A0A182GZ59   F4X525   A0A182GCQ0   B0W5I2   E9ICR4   A0A182GTB3   A0A0L7RCV8   A0A2J7RF66   A0A1J1HXG6   A0A1S4GQI2   A0A194QJ30   A0A026VZI4   A0A151IIS1   V9IBH4   A0A2R7VRY9   A0A0P6J4J0   A0A195EZV9   A0A212FCC0   Q17LS5   A0A310SDF5   Q7Q6Y6   A0A139WGJ0  

Pubmed

19121390    22118469    28756777    26354079    24730650    26227816    + More
20966253    25244985    20920257    23761445    24438588    24330624    21347285    26483478    21719571    21282665    12364791    24508170    30249741    26999592    17510324    18362917    19820115   

EMBL

BABH01025733    RSAL01000045    RVE50589.1    BABH01025731    RVE50592.1    BABH01035527    + More
BABH01035528    BABH01035529    AGBW02010956    OWR47467.1    ODYU01011356    SOQ57052.1    KZ150249    PZC71836.1    NWSH01000008    PCG80953.1    KQ458671    KPJ05558.1    PZC71838.1    PCG80949.1    BABH01035548    KQ460077    KPJ17887.1    KPJ05561.1    RSAL01000181    RVE44925.1    KQ460126    KPJ17589.1    KPJ17884.1    AGBW02009614    OWR50324.1    NWSH01000704    PCG74684.1    AGBW02008317    OWR53759.1    ODYU01007347    SOQ50032.1    KPJ17881.1    KPJ05573.1    NWSH01002771    PCG67556.1    KZ150133    PZC73021.1    ODYU01007122    SOQ49614.1    ODYU01008354    SOQ51875.1    KPJ17885.1    BABH01038881    KPJ05554.1    PCG74683.1    SOQ49615.1    PCG74682.1    KZ150491    PZC70686.1    KJ439227    AHX25878.1    PZC70688.1    PZC71835.1    BABH01025717    KQ458981    KPJ04505.1    KPJ05555.1    JTDY01004123    KOB68566.1    NWSH01000578    PCG75536.1    NWSH01001042    PCG72950.1    KPJ17891.1    AXCM01002831    ADMH02001735    ETN61249.1    KPJ05559.1    ATLV01010625    KE524589    KFB35580.1    BABH01035544    AXCN02000368    JR037227    AEY57648.1    KZ288248    PBC31149.1    KQ435711    KOX79603.1    KQ980713    KYN14397.1    GALA01001196    JAA93656.1    KQ976432    KYM87519.1    ADTU01007640    ADTU01007641    KQ434796    KZC05843.1    JXUM01098770    JXUM01098771    JXUM01098772    JXUM01098773    KQ564446    KXJ72257.1    GL888680    EGI58482.1    JXUM01009472    KQ560284    KXJ83288.1    DS231843    EDS35465.1    GL762354    EFZ21649.1    JXUM01086634    KQ563580    KXJ73638.1    KQ414615    KOC68688.1    NEVH01004413    PNF39483.1    CVRI01000035    CRK92768.1    AAAB01008960    KPJ05563.1    KK107538    QOIP01000005    EZA49147.1    RLU22973.1    KQ977459    KYN02558.1    JR037228    AEY57649.1    KK854045    PTY10206.1    GDUN01000911    JAN95008.1    KQ981905    KYN33447.1    AGBW02009205    OWR51384.1    CH477213    EAT47626.1    KQ762882    OAD55364.1    EAA11457.4    KQ971345    KYB27009.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000218220    UP000053268    UP000053240    + More
UP000037510    UP000075882    UP000076407    UP000075903    UP000075900    UP000075881    UP000075920    UP000075880    UP000076408    UP000069272    UP000075883    UP000075885    UP000000673    UP000030765    UP000075884    UP000075886    UP000242457    UP000053105    UP000078492    UP000005203    UP000078540    UP000005205    UP000076502    UP000069940    UP000249989    UP000007755    UP000002320    UP000053825    UP000235965    UP000183832    UP000053097    UP000279307    UP000078542    UP000078541    UP000008820    UP000007062    UP000007266   

PRIDE

H9J4W9    H9J4X1    H9J4S1    H9J4R6    H9J4X0    H9J525    + More
H9J4X7    H9J4R7   

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1

Interpro

IPR036259   MFS_trans_sf        + More
IPR020846   MFS_dom       
IPR005828   MFS_sugar_transport-like       
IPR003663   Sugar/inositol_transpt       
IPR005829   Sugar_transporter_CS       
IPR011701   MFS       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9J4W9   A0A3S2NWF9   H9J4X1   A0A3S2P2D1   H9J4S1   A0A212F161   + More
A0A2H1WVP2   A0A2W1BG84   A0A2A4KAY2   A0A194QJ23   A0A2W1B9E8   A0A2A4KA42   H9J4R6   A0A0N1IHN6   A0A194QPY2   A0A3S2LUZ6   A0A0N1IPZ0   A0A0N1IIX6   A0A212F9B1   A0A2A4JSU4   A0A212FJ74   A0A2H1WB04   A0A0N1IPS2   A0A194QJ40   A0A2A4J748   A0A2W1BFI0   A0A2H1WAU6   H9J4X0   A0A2H1WFL6   A0A0N0PDT5   H9J525   A0A194QJI7   A0A2A4JT91   A0A2H1W936   A0A2A4JTG8   A0A2W1BCE3   A0A023PNK9   A0A2W1BD78   H9J4X7   A0A194QHU0   A0A194QKX0   A0A0L7KZR3   A0A182LJ94   A0A2A4JUU3   A0A2A4JNG3   A0A182XN09   A0A0N1IG19   A0A182VI49   A0A182RRX2   A0A182KD28   A0A182WKH8   A0A182IUY7   A0A182Y162   A0A182FDK9   A0A182MLS9   A0A182PHI4   W5JEJ5   A0A194QJJ6   A0A084VC86   H9J4R7   A0A182NHP5   A0A182QST8   V9I974   A0A2A3EIY5   A0A0M9AB14   A0A195DNJ4   A0A088AM86   T1DI16   A0A195BPU7   A0A158P3D0   A0A154P1X7   A0A182GZ59   F4X525   A0A182GCQ0   B0W5I2   E9ICR4   A0A182GTB3   A0A0L7RCV8   A0A2J7RF66   A0A1J1HXG6   A0A1S4GQI2   A0A194QJ30   A0A026VZI4   A0A151IIS1   V9IBH4   A0A2R7VRY9   A0A0P6J4J0   A0A195EZV9   A0A212FCC0   Q17LS5   A0A310SDF5   Q7Q6Y6   A0A139WGJ0  

KEGG

101746835    no KO assigned | (RefSeq) facilitated trehalose transporter Tret1-like

GO

GO:0022857   GO:0016021   GO:0008643   GO:0055085   GO:0005215   GO:0005351   GO:0005887   GO:0005515   GO:0008270   GO:0016706   GO:0006096   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259  

Length:

122

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

68.41181

Exp number, first 60 AAs:

28.49994

Total prob of N-in:

0.99623

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  54

TMhelix

55  -  77

inside

78  -  88

TMhelix

89  -  111

outside

112  -  122

 

 

Pi

289.833039

Theta

197.780689

Tajima's D

3.474452

CLR

0.29469

CSRT

0.992700364981751

Interpretation

Uncertain