Silkworm Genome Informatics Database

Gene

KWMTBOMO16041

Pre Gene Modal

BGIBMGA004593

Annotation

PREDICTED:_fez_family_zinc_finger_protein_2-like_[Amyelois_transitella]

Location

Bomo_Chr27(-):7195047-7218943 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.515

CDS

ATGCAGCCGTTCCAGTCAAACGCCCGACCGGAGGGCCCGAGGGAGTCGTCGCCTGAACGAGCCAAATCACCGGACACTCAGACAGCTCCTCCTGTACTTAACTTCTCAATAGCAAGGCTGATGGAGCCGGACAGAAAGAAATCCGTTTCGCCGGAACCAACGCCCCCTTCGAATTTCCTCTCGTATGGCGCACATTTACTGGACTCCGCTTTCAAACAATACATACCAGCTGCGAGAAGACAGCTCGTTTCGCACTATCCGCTCTTGTACTACAGTCCGGACCTGCTATCCTTGACCTACGCGCCACAGATGCATCTCTCGCGACCTCCGCCCGCCCCGTCTCCAGTACAGAGACAGCCCAGTCCACGACCCCCGGCTGCCGACCAAGCCGTCTCCTCGACTACGGGCCCCACGCCGTCGCCGGCAAAGAACAAGAGCTTCGCGTGTGGCGATTGCGGTAAAGTATTCAATGCGCATTACAATCTGACGAGACACATGCCCGTGCACACCGGGGCCAGGCCGTTTGTGTGCAAAATATGCGGAAAAGGCTTCCGTCAAGCTTCGACGCTGTGCCGGCATAAGATAATACACACTTCGGAGAAACCTCACAAATGCCTGACGTGCGGAAAAGCCTTTAATCGCTCATCGACGTTGAATACTCACGCGAGAATACACGCCGGATATAAGCCATTCGTCTGCGAATTCTGCGGCAAGGGATTCCACCAGAAGGGCAACTATAAGAACCACCGTTTGACTCACAGCGGCGAGAAGGCGTACAAATGCAGCATTTGCAACAAAGCTTTCCACCAAATATACAATCTGACGTTTCATATGCACACGCACAACGAACGGAAGCCGTTCACTTGCAGCATCTGCGCTAAGGGCTTCTGCAGGAACTTCGATCTGAAGAAGCACACAAGGAAGCTGCATATGGGCGGTTCGAATAATGGAGACTCTTCACTGGACGCGCAGGACGACTCGACACAGGAGACCACTGCTAGTCCCGGCGAAGAACCGAGCAGGATCGCCTTCAGACCGTTCTTAGGGTCTTCGTATTCACGGATCTTGGACCCTGCTCGTATAACGGCGCCCAATGCGTTTTTCTCGAAGCTCTTGTGA

Protein

MQPFQSNARPEGPRESSPERAKSPDTQTAPPVLNFSIARLMEPDRKKSVSPEPTPPSNFLSYGAHLLDSAFKQYIPAARRQLVSHYPLLYYSPDLLSLTYAPQMHLSRPPPAPSPVQRQPSPRPPAADQAVSSTTGPTPSPAKNKSFACGDCGKVFNAHYNLTRHMPVHTGARPFVCKICGKGFRQASTLCRHKIIHTSEKPHKCLTCGKAFNRSSTLNTHARIHAGYKPFVCEFCGKGFHQKGNYKNHRLTHSGEKAYKCSICNKAFHQIYNLTFHMHTHNERKPFTCSICAKGFCRNFDLKKHTRKLHMGGSNNGDSSLDAQDDSTQETTASPGEEPSRIAFRPFLGSSYSRILDPARITAPNAFFSKLL

Uniprot

H9J503 A0A2A4JIG3 A0A2H1WAS5 A0A0L7L3Y9 A0A0N1IHN1 A0A0N0P9G6 + More
A0A067QZK9 U4TUQ4 N6U6U1 A0A2P8ZB18 A0A1W4XD39 A0A2A3EC58 A0A087ZN50 A0A195C0U9

Pubmed

19121390 26227816 26354079 24845553 23537049 29403074 + More

EMBL

BABH01025753 NWSH01001281 PCG71857.1 ODYU01007360 SOQ50056.1 JTDY01003109 + More
KOB70135.1 KQ460077 KPJ17872.1 KQ459444 KPJ00926.1 KK852812 KDR15868.1 KB631673 ERL85284.1 APGK01047258 KB741077 ENN74292.1 PYGN01000119 PSN53686.1 KZ288287 PBC29363.1 KQ978379 KYM94509.1

Proteomes

UP000005204 UP000218220 UP000037510 UP000053240 UP000053268 UP000027135 + More
UP000030742 UP000019118 UP000245037 UP000192223 UP000242457 UP000005203 UP000078542

PRIDE

H9J503

Pfam

PF00096 zf-C2H2

Interpro

IPR036236 Znf_C2H2_sf + More
IPR013087 Znf_C2H2_type

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9J503 A0A2A4JIG3 A0A2H1WAS5 A0A0L7L3Y9 A0A0N1IHN1 A0A0N0P9G6 + More
A0A067QZK9 U4TUQ4 N6U6U1 A0A2P8ZB18 A0A1W4XD39 A0A2A3EC58 A0A087ZN50 A0A195C0U9

PDB

5V3G E-value=1.70549e-33, Score=356

KEGG

101747109 no KO assigned | (RefSeq) fez family zinc finger protein 2-like

GO

GO:0003676 GO:0046872 GO:0003677 GO:0008270 GO:0006096 GO:0001678 GO:0005536 GO:0046835 GO:0006281 GO:0006259

Length:

372

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04989

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01155

outside

1 - 372

Pi

279.297011

Theta

165.390601

Tajima's D

2.892924

CLR

0.217996

CSRT

0.974151292435378

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics