Gene

KWMTBOMO16040  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004557

Annotation

PREDICTED:_transcriptional_activator_protein_Pur-alpha_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr27(+):7136166-7158914      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.216 Nuclear   Reliability : 2.367

CDS

ATGTTTGAATATCATGGTCAAGGCATGGACGCGGGAGGGAACAATTTTGACTCCGGTCAACAGCCACAAGAGCAGGAGCTGGCGACGAAGATGCTGCAGATCCAATCGAAACGTTTCTACTTAGACGTAAAGCAGAACAGGAGGGGTAGATTCATTAAAGTAGCCGAAATTGGAGCGGACGGGAGACGCAGTCAAATATTCCTCGCCATGTCAACAGCCGCCGAATTCCGTGACCACCTGTCCAGTTTCAGTGATTTTTACTCGTCACTCGGACCACCCAATCCGGACAACGTTCCCGATGACGGAAAACTCAAGTCGGAAATGATGCTTAAGGACAACCGTCGGTACTATTTGGATCTGAAGGAGAACTCCCGCGGGCGGTTCCTCCGTGTCTCCCAGACCATAACGCGCGGGGGGCCCCGCAGTCAGATCGCGCTGCCGGCGCAGGGCATGATCGAGTTTCGGGACGCACTGACCGATCTCTTGGATGACTTCGGTACTGATGATGGCGGCTTCAAAGGAGAGCTCCCCGAAGGTCGACATTTGCGTGTCGACAACAAGAATTTCTACTTCGACATCGGACAGAACAACCGCGGTATATACATGAAAGTAAGCGAGGTGAAGAGTAACTTCCGCACCGCCATCACCGTGCCGGAGAAGTGTTGGACCCGCTTCAGGGACATCCTGGCCGATTACTGCGACAAGATGTGCCGCGCTCACCAACAGAACGCCGAAAACCATCAGAGCGGACCTATACCTGGTGGTTCCGGTGTCCGGGGCGGTCCCTCGCAGCCAGCGCCCTCTTCCTCCGACATAGACACATTCTCTTGCAACTTTGTGTGGATATCTGTGGTCAAGATGACAATGGCAGTTTTCTCTGAAGTCGAAGTGAAACGAAATGATGACATAGAGGAATTAAAATTCCAGATTAAGTCATAA

Protein

MFEYHGQGMDAGGNNFDSGQQPQEQELATKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIFLAMSTAAEFRDHLSSFSDFYSSLGPPNPDNVPDDGKLKSEMMLKDNRRYYLDLKENSRGRFLRVSQTITRGGPRSQIALPAQGMIEFRDALTDLLDDFGTDDGGFKGELPEGRHLRVDNKNFYFDIGQNNRGIYMKVSEVKSNFRTAITVPEKCWTRFRDILADYCDKMCRAHQQNAENHQSGPIPGGSGVRGGPSQPAPSSSDIDTFSCNFVWISVVKMTMAVFSEVEVKRNDDIEELKFQIKS

Uniprot

A0A2A4J4H5   A0A2A4J3Q1   A0A2W1BEZ4   A0A2H1W011   A0A2A4J521   A0A2A4J5U1   + More
A0A3S2M7M2   A0A0N0PDP9   H9J4W7   A0A1B0CEW6   A0A1L8DFS2   A0A336K6I4   A0A139WGK3   A0A1B0DBY3   A0A084VKX3   V5GZZ6   A0A1W4XDQ9   A0A1Y1MBN0   U4U6D6   A0A1Y1MEI4   A0A0C9QF24   A0A034VMZ0   A0A0A1XDZ2   B4NHW9   A0A1B6M4K7   B4L7B7   A0A1Y1MAY3   A0A0T6BCX5   U5EVX2   W8BLY3   A0A0K8TNZ4   A0A1W4XP68   A0A2P8Y863   A0A1B6E7I2   A0A1I8NFC1   T1PDF5   A0A1W4XNC3   A0A0A1WIK9   B4MF02   A0A1I8Q9U3   A0A3B0KY58   B3P9S9   A0A0Q9XS42   B4H877   F3YDK4   A0A1J1J9G6   A0A1B0FJX5   A0A0P4WLS7   A0A0J9S2D8   Q95RR6   A0A0P5BB18   B4PW12   A0A0P6FXM1   A0A0P8XJH6   N6U3A8   A0A0P5CR78   A0A3Q0IJG3   K7INI5   A0A1W4VHV1   A0A232F9Z7   A0A2S2PUW6   A0A0Q5SDN5   A0A0Q9WKX4   B4IIX0   A0A0J9USG3   Q9V4D9   A0A1A9WQ86   A0A0P6BPN3   Q8IMC4  

Pubmed

28756777    26354079    19121390    18362917    19820115    24438588    + More
28004739    23537049    25348373    25830018    17994087    18057021    24495485    26369729    29403074    25315136    20479145    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    19846792    26744780    17550304    20075255    28648823   

EMBL

NWSH01003208    PCG66779.1    PCG66777.1    KZ150258    PZC71777.1    ODYU01005505    + More
SOQ46425.1    PCG66778.1    PCG66772.1    RSAL01000017    RVE52899.1    KQ460077    KPJ17868.1    BABH01025754    AJWK01009369    GFDF01008803    JAV05281.1    UFQS01000135    UFQT01000135    SSX00289.1    SSX20669.1    KQ971346    KYB26991.1    AJVK01030396    ATLV01014310    KE524956    KFB38617.1    GALX01000949    JAB67517.1    GEZM01036080    JAV82991.1    KB632003    ERL87868.1    GEZM01036081    JAV82990.1    GBYB01001969    JAG71736.1    GAKP01015123    GAKP01015120    GAKP01015118    JAC43829.1    GBXI01005609    JAD08683.1    CH964272    EDW83619.1    KRF99836.1    GEBQ01009125    JAT30852.1    CH933813    EDW10911.1    GEZM01036082    JAV82989.1    LJIG01001889    KRT85051.1    GANO01003216    JAB56655.1    GAMC01004455    GAMC01004454    GAMC01004453    GAMC01004452    JAC02101.1    GDAI01001720    JAI15883.1    PYGN01000816    PSN40430.1    GEDC01003429    JAS33869.1    KA646155    AFP60784.1    GBXI01016069    JAC98222.1    CM000831    CH940665    ACY70525.1    EDW71103.1    OUUW01000017    SPP89018.1    CH954184    EDV45242.1    KRG07270.1    KRG07271.1    KRG07272.1    CH479221    EDW34877.1    BT126365    AE014135    AEC46881.1    AGB96553.1    CVRI01000074    CRL08166.1    CCAG010009022    CCAG010009023    GDIP01255119    JAI68282.1    CM002916    KMZ07240.1    KMZ07242.1    KMZ07245.1    AY061185    AAL28733.1    AAN06497.1    AAN06498.1    AGB96551.1    GDIP01187002    JAJ36400.1    CM000161    EDW99317.1    KRK04891.1    GDIP01042512    GDIQ01052232    GDIQ01008268    JAM61203.1    JAN42505.1    CH902631    KPU74967.1    APGK01044227    KB741021    ENN75091.1    GDIP01172197    JAJ51205.1    NNAY01000558    OXU27674.1    GGMR01020495    MBY33114.1    KQS21497.1    KRF85351.1    KRF85352.1    KRF85353.1    KRF85354.1    CH480845    EDW50911.1    KMZ07239.1    KMZ07241.1    KMZ07243.1    KMZ07244.1    KMZ07246.1    AAF59337.2    AGB96552.1    GDIP01026752    JAM76963.1    AAN06499.1   

Proteomes

UP000218220    UP000283053    UP000053240    UP000005204    UP000092461    UP000007266    + More
UP000092462    UP000030765    UP000192223    UP000030742    UP000007798    UP000009192    UP000245037    UP000095301    UP000008792    UP000095300    UP000268350    UP000008711    UP000008744    UP000000803    UP000183832    UP000092444    UP000002282    UP000007801    UP000019118    UP000079169    UP000002358    UP000192221    UP000215335    UP000001292    UP000091820   

PRIDE

H9J4W7    F3YDK4    Q95RR6    Q9V4D9    Q8IMC4   

Pfam

PF04845   PurA

Interpro

IPR006628   PUR-bd_fam       

ProteinModelPortal

A0A2A4J4H5   A0A2A4J3Q1   A0A2W1BEZ4   A0A2H1W011   A0A2A4J521   A0A2A4J5U1   + More
A0A3S2M7M2   A0A0N0PDP9   H9J4W7   A0A1B0CEW6   A0A1L8DFS2   A0A336K6I4   A0A139WGK3   A0A1B0DBY3   A0A084VKX3   V5GZZ6   A0A1W4XDQ9   A0A1Y1MBN0   U4U6D6   A0A1Y1MEI4   A0A0C9QF24   A0A034VMZ0   A0A0A1XDZ2   B4NHW9   A0A1B6M4K7   B4L7B7   A0A1Y1MAY3   A0A0T6BCX5   U5EVX2   W8BLY3   A0A0K8TNZ4   A0A1W4XP68   A0A2P8Y863   A0A1B6E7I2   A0A1I8NFC1   T1PDF5   A0A1W4XNC3   A0A0A1WIK9   B4MF02   A0A1I8Q9U3   A0A3B0KY58   B3P9S9   A0A0Q9XS42   B4H877   F3YDK4   A0A1J1J9G6   A0A1B0FJX5   A0A0P4WLS7   A0A0J9S2D8   Q95RR6   A0A0P5BB18   B4PW12   A0A0P6FXM1   A0A0P8XJH6   N6U3A8   A0A0P5CR78   A0A3Q0IJG3   K7INI5   A0A1W4VHV1   A0A232F9Z7   A0A2S2PUW6   A0A0Q5SDN5   A0A0Q9WKX4   B4IIX0   A0A0J9USG3   Q9V4D9   A0A1A9WQ86   A0A0P6BPN3   Q8IMC4  

PDB

5FGP     E-value=1.61941e-59,     Score=580

KEGG

101735314    K21772 transcriptional activator protein Pur-alpha | (RefSeq) transcriptional activator protein Pur-

GO

GO:0005634   GO:0043565   GO:0000977   GO:0001227   GO:0003690   GO:0032422   GO:0003677   GO:1990124   GO:0005737   GO:0031935   GO:0003729   GO:0003723   GO:0042802  

PANTHER

PTHR12611  

Length:

312

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01391

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01384

outside

1  -  312

 

 

Pi

245.010105

Theta

169.901946

Tajima's D

0.337554

CLR

118.949034

CSRT

0.460976951152442

Interpretation

Uncertain