Gene

KWMTBOMO16035

Annotation

PREDICTED:_uncharacterized_protein_K02A2.6-like_[Amyelois_transitella]

Location

Bomo_Chr27(+):6980566-6984838      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.545

CDS

ATGGAACACGCCCGACCACCGTCAGAATTGAGTCTGGAAGGCAACTCCGTCAGCCGGGCTGACGCATGGAAGCGTTGGAGGAAACAATTTCATGTATTTTTGAAAGCATCAGGGGTGCATAAAGAAGAAGGCAGTGTGCAAGCCAGCTTGCTCATCAATTTAATTGGAACGGAAGGTTTCGATGTGTACGAGACGTTTAAGTTTTCAAATGACACTGAAAAAGATGACGTAACGGTTTTGTTAAAAAAATTCGACGAATACTTCGGCGTCAAACCAAATGTTACGTTGGCGAGATATAATTTCTACATGAGAAACCAGGAAGGCGGCGAATCCATAGATCAGTATGTGACGGCTTTGAAACTGCTGAGCAAAACCTGTGAATTTAAAACCTTAGAAGACGAATTCATTCGCGATCGGATCGTATGCGGCGTAAAAAATACGATAGTTCGCGATCGTTTACTGAGAACGGACGACTTGACGATGGACAAAGCTATTAAAATATGCCAAGTCGACGAGGTATCGGCGGACAGCAGTCGCGTATTGCAGGAGTCGCGCGGAGCGAGCGCGGAGCCGGTGCGCGTGGACGCTGTGGGCGCGCGGGTGGTGCTGGGCCACGTGCGGCGCGGGGCCGAGCCGGCGGCGCGCGAGCAGCTCGCGGCGGCCGCGGCGGTCACCGGCTGCGTGCGGTCCCGGATGGCGCGGGGCGCCCGCCGCCTCTTTCCAGTTCATCTGCGTCCAGTACTTGTCTCAGAGGACGAAAATAAATACGAGCCGGAACTGGACGATGACTGGGAGTCGTTTTATATATCTACTTTAATTGATGGTTCCAAAATCGACTCGGTGTCGCAGGATTGGTTTGAGGTCCTCCGAGGAGAATGGGGCTCGGAAAATTTTAAACTAGACTCGGGTGCAGATATCAATGTCTTATCTTTTAAGCGATTTGTGCAGTTAGGCAATAACCCTAATAACATTGTTGTAAATCATAAGGTTAAACTGCAATCTTACAGTGGCGATTTCATTCCTATTAAGGGAATTTGTAATATTAAATGGTGGTATAAAAATGTTCAATATGATCTTAAGTTTGCGATAGCTGATATTGATTGTCAAAGTGTACTGGGACTGCAGGCGTGCTTATTATTAGGGTTAATAAAAAGAATTCACGATATAAATTTCTCTAAAAATAGTGATTTGTTCACTGGGTTAGGTTGTTTACCGGGGGAATATCATATAACGGTAGATAGGGATGTGACGCCGGTGGTGTGCGCTCCGCGGAAAGTACCGTTAAGCCTTCGTGATAACTTGAAGGACGAGCTCGATAGGATGACAGAGTTAGGTGTGATTAGGAAGGTGACTCATCCGACACCTTGGGTCAACTCGTTAGTAGTAGTGGCCAAGACAAATGGTAAAATGCGCATATGCCTAGACCCGAGGCCTCTCAATAAGGCGATTCAACGTGCTCATTTTCAACTACCCACCATAAATGAGTTGGCTACCAAATTGAATGGGGCTAAATATTTTTCGGTATTGGATGCCAATTCAGGATTTTGGTCCGTAAAGCTAGATAAGGAGAGTGCCGATTTATGCACATTTATTACGCCGTTTGGGCGATATCAATATCTAAGATTACCGTTCGGACTGAACTGCGCACCGGAGGTATTCCACGCTAAATTAAAACAATTGTTAGAAGGTTTAGACGGTGTTGAGTCGTTTATTGATGATATTATTGTCTGGGGGTCCACTAGGCGAGAACATGATGTAAGACTAAATGCGTTATTTCAAAAAGCGCGAGATATTAATTTAAAGTTTAACAAAGATAAGTGTCGCATTTGTGTCGATGAGGTGACATATTTGGGACATATTTTTAATAAAGACGGAATGAAAGTAGATACGGAAAAAGTGCGGGCTGTAATCAATATGCCGGAACCTACGGATTGTAAAAGTTTAGAAAGGTTCTTGGGTGCAATTAATTATTTATCAAAGTTTATACCTAACTACTCGCAACACATATTTCCATTGACTAGATTATTGAAAAAAGATGTCGAGTGGTGTTGGGAAATAGGTCACAAAAACGCCTTTGATAAATTAAAGAAACTGATATGCGAGGCTCCGGTATTATCGTTGTTTGACGTAGGCAGTGAGGTATTGTTGTCGGTGGACGCAAGCAGCGTCGCACTTGGCGCGGTGCTGATGCAGCGCGGCCGCCCGGTCGAGTACGCGTCGCGCACACTCACCGACACACAACAGAGATACGCTCAGATTGAAAAAGAAATGTTAGCTATTGTCTTTGCTTGTGAAAAATTTCACCAGTACATTTATGGAAAAAGGTATATAGTCATAGAAACTGACCATAAACCTCTTGAAAGTATTTTTAAAAAGCCGCTCAATTCAGTCCCAGCACGCTTGCAGCGTATGATGTTAAAATTACAAGGGTACGATCTGAAAATTACTTATAAACCGGGGAAGTATATGTATATACCCGACACGTTATCACGTGCGCCTCTTCCGGATTTATATGACGATAAAATTAGTAAGGCAGTATTGAACCAATTGAAAATGGTAATTAACAATGTACCGATGTCTCAAAGCAAACTGACATTAGTTAAGAAAGAAACTAGTAAAGATGAGTATTTGAAACGTTTGTTAGTTTACATTAATGAAGGTTGGCCCGTTCATAAATATAATGTTGATAGTGATTTAAAGTATTTTTGGTCCATGAGAGACGAGCTGTACTCTGTTGACGGAGTAATTTTTAAAGATAAACAGCAACAGCATAAAACAATAATAGAAAAACAATTAAAAAGTAAAATGTATTATGACCAACATTGTAAAGAGCAGCCGGAGCTAAGTGTCGGCGATGATGTAATTATGTTAGAACATAATAATGAACGAATGCGCGGCACTGTCGTAGGCAAGGCATCTGCACCGCGTTCATACATTGTAAAAAACAAATTAGGTATATATCGACGTAATCGCCGACATTTAATTAAAAATATGCCTGATGAGAAACCTAATGTTGTGGAAAAGCTGAAGAATGATCGGCGCGACACAATAGTGATCGTATCAGACGAGTCAAGTGGGGGAGAATATGAGATGAGTGTGGATGAGGATGGTTCAGTGTACGAACCGAGTACTTTGTCATCACCTTCATCACCTCATATTTATCCGCCTACTACTCGTAGTAGAACTAAGCAGAATGCAATTAATAATAATTAA

Protein

MEHARPPSELSLEGNSVSRADAWKRWRKQFHVFLKASGVHKEEGSVQASLLINLIGTEGFDVYETFKFSNDTEKDDVTVLLKKFDEYFGVKPNVTLARYNFYMRNQEGGESIDQYVTALKLLSKTCEFKTLEDEFIRDRIVCGVKNTIVRDRLLRTDDLTMDKAIKICQVDEVSADSSRVLQESRGASAEPVRVDAVGARVVLGHVRRGAEPAAREQLAAAAAVTGCVRSRMARGARRLFPVHLRPVLVSEDENKYEPELDDDWESFYISTLIDGSKIDSVSQDWFEVLRGEWGSENFKLDSGADINVLSFKRFVQLGNNPNNIVVNHKVKLQSYSGDFIPIKGICNIKWWYKNVQYDLKFAIADIDCQSVLGLQACLLLGLIKRIHDINFSKNSDLFTGLGCLPGEYHITVDRDVTPVVCAPRKVPLSLRDNLKDELDRMTELGVIRKVTHPTPWVNSLVVVAKTNGKMRICLDPRPLNKAIQRAHFQLPTINELATKLNGAKYFSVLDANSGFWSVKLDKESADLCTFITPFGRYQYLRLPFGLNCAPEVFHAKLKQLLEGLDGVESFIDDIIVWGSTRREHDVRLNALFQKARDINLKFNKDKCRICVDEVTYLGHIFNKDGMKVDTEKVRAVINMPEPTDCKSLERFLGAINYLSKFIPNYSQHIFPLTRLLKKDVEWCWEIGHKNAFDKLKKLICEAPVLSLFDVGSEVLLSVDASSVALGAVLMQRGRPVEYASRTLTDTQQRYAQIEKEMLAIVFACEKFHQYIYGKRYIVIETDHKPLESIFKKPLNSVPARLQRMMLKLQGYDLKITYKPGKYMYIPDTLSRAPLPDLYDDKISKAVLNQLKMVINNVPMSQSKLTLVKKETSKDEYLKRLLVYINEGWPVHKYNVDSDLKYFWSMRDELYSVDGVIFKDKQQQHKTIIEKQLKSKMYYDQHCKEQPELSVGDDVIMLEHNNERMRGTVVGKASAPRSYIVKNKLGIYRRNRRHLIKNMPDEKPNVVEKLKNDRRDTIVIVSDESSGGEYEMSVDEDGSVYEPSTLSSPSSPHIYPPTTRSRTKQNAINNN

Uniprot

A0A3P8Q6C6   A0A3B3HLX7   A0A3P8S414   A0A3B1JKR1   A0A023EY30   A0A3P9HT22   + More
A0A2G8JDW4   A0A2G8LMB1   A0A2S2N8I3   A0A3B3C9X5   A0A1S3DNR0   A0A3Q2XZ76   A0A1S3DH71   A0A1S3DM37   X1WTY2   A0A3P9LZF9   A0A3P9K9H2   A0A0A9Z4Y4   A0A146LC45   A0A3P8Q2Q2   A0A1A8S1T9   A0A1A8DQM9   A0A3P8RKT7   A0A1A8L2U7   A0A3P9AYU2   A0A3P8RHF8   A0A146TAZ6   A0A3P9HXP1   A0A3B3H7E4   A0A3P8R8M6   A0A1S3JEC7   A0A3B3I1S4   I3KYE2   A0A267GLM4   A0A1S3DJN8   A0A147BKH7   A0A3Q0JJE3   A0A3Q2DE46   A0A1Y1M671   A0A3P8QAD1   A0A1A8N8J3   A0A1Y1MCJ7   A0A0P5XDK7   A0A146SN99   A0A3Q0JK14   A0A1Y1KVT8   A0A1S3HHB2   A0A147BIE4   A0A1Y1NDC5   A0A147BJX4   W4Y1E4   W4YGV7   A0A146L0H7   A0A0A9VTL5   A0A2S2NI46   A0A075EIL5   W4ZHL7   J9LYD2   W4XLW6  

Pubmed

17554307    25329095    25474469    29023486    29451363    25401762    + More
26823975    25186727    29652888    28004739    25201971   

EMBL

GBBI01004745    JAC13967.1    MRZV01002352    PIK33923.1    MRZV01000033    PIK61397.1    + More
GGMR01000868    MBY13487.1    ABLF02013930    ABLF02013934    GBHO01004090    JAG39514.1    GDHC01013957    JAQ04672.1    HAEH01020882    SBS11479.1    HADZ01002490    HAEA01007842    SBQ36322.1    HAEF01001580    SBR38962.1    GCES01096219    JAQ90103.1    AERX01070080    NIVC01000291    PAA86189.1    GEGO01004116    JAR91288.1    GEZM01041944    JAV80090.1    HAEH01000697    SBR65395.1    GEZM01035137    JAV83383.1    GDIP01073678    JAM30037.1    GCES01104253    JAQ82069.1    GEZM01074317    JAV64601.1    GEGO01004841    JAR90563.1    GEZM01011167    JAV93617.1    GEGO01004317    JAR91087.1    AAGJ04066141    AAGJ04164197    GDHC01017753    JAQ00876.1    GBHO01044535    JAF99068.1    GGMR01004179    MBY16798.1    KF319019    AIE48224.1    AAGJ04068764    ABLF02041541    AAGJ04172695   

Proteomes

UP000265100    UP000001038    UP000265080    UP000018467    UP000265200    UP000230750    + More
UP000261560    UP000079169    UP000264820    UP000007819    UP000265180    UP000265160    UP000085678    UP000005207    UP000215902    UP000265020    UP000007110   

Pfam

PF17921   Integrase_H2C2        + More
PF17919   RT_RNaseH_2
PF00078   RVT_1
PF00665   rve

Interpro

IPR001584   Integrase_cat-core        + More
IPR041577   RT_RNaseH_2       
IPR001878   Znf_CCHC       
IPR012337   RNaseH-like_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR000477   RT_dom       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR001995   Peptidase_A2_cat       
IPR001969   Aspartic_peptidase_AS       
IPR036875   Znf_CCHC_sf       

SUPFAM

SSF50630   SSF50630        + More
SSF53098   SSF53098       
SSF57756   SSF57756       

Gene 3D

2.40.70.10     3.30.420.10    

ProteinModelPortal

A0A3P8Q6C6   A0A3B3HLX7   A0A3P8S414   A0A3B1JKR1   A0A023EY30   A0A3P9HT22   + More
A0A2G8JDW4   A0A2G8LMB1   A0A2S2N8I3   A0A3B3C9X5   A0A1S3DNR0   A0A3Q2XZ76   A0A1S3DH71   A0A1S3DM37   X1WTY2   A0A3P9LZF9   A0A3P9K9H2   A0A0A9Z4Y4   A0A146LC45   A0A3P8Q2Q2   A0A1A8S1T9   A0A1A8DQM9   A0A3P8RKT7   A0A1A8L2U7   A0A3P9AYU2   A0A3P8RHF8   A0A146TAZ6   A0A3P9HXP1   A0A3B3H7E4   A0A3P8R8M6   A0A1S3JEC7   A0A3B3I1S4   I3KYE2   A0A267GLM4   A0A1S3DJN8   A0A147BKH7   A0A3Q0JJE3   A0A3Q2DE46   A0A1Y1M671   A0A3P8QAD1   A0A1A8N8J3   A0A1Y1MCJ7   A0A0P5XDK7   A0A146SN99   A0A3Q0JK14   A0A1Y1KVT8   A0A1S3HHB2   A0A147BIE4   A0A1Y1NDC5   A0A147BJX4   W4Y1E4   W4YGV7   A0A146L0H7   A0A0A9VTL5   A0A2S2NI46   A0A075EIL5   W4ZHL7   J9LYD2   W4XLW6  

PDB

4OL8     E-value=6.53074e-53,     Score=528

KEGG

NA   

GO

GO:0015074   GO:0003676   GO:0004190   GO:0008270   GO:0005634  

Length:

1070

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00134

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.00003

outside

1  -  1070

 

 

Pi

135.435752

Theta

144.512157

Tajima's D

-0.636986

CLR

402.793268

CSRT

0.213489325533723

Interpretation

Possibly Positive selection