Gene

KWMTBOMO16031  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004596

Annotation

PREDICTED:_Na(+)/H(+)_exchange_regulatory_cofactor_NHE-RF2_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr27(-):6906188-6906995      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.575 Mitochondrial   Reliability : 1.231 Nuclear   Reliability : 1.78

CDS

ATGTCCGCGAACGGGTCGGCGGCCATCGAGCCACGACTCTGCCACGTGCGGAAGACGCCAGACTTCGACGGCTACGGGTTTAATTTGCACGCAGAAAAAGGAAAACCCGGTCAGTACATCGGTAAGGTTGACGATGGCTCTCCGGCAGAGACCGCTGGCTTAAAACGCGGCGACCGCATCCTCGAAGTGAACGGCCACAGTATTGCCGGCGAGACCCACAAGCAAGTGGTGGCTCGCATCAAGGAGCGGCCCGATGACGCCGAGCTGCTGGTGATAGCACCGGCCCCGGGGGACCAGATGCCCGATTTGGACGTGCCGGTGCCGGAAAAGACCCCTCCGCCTAGCGAAGCGCCCCGGGACAGTCCGTCGCCGACCGAACCTCCTAAGCTGAACCTGCAGATGACCGCGGCCGAGATGCGAGCACATCTCGCCGCCAAGAAGAAGTTCGACCCTAAGAAAGTGCCGATGGACCTTAGGTCCAAGTTTGACATCGTGAAGAAACTGTGA

Protein

MSANGSAAIEPRLCHVRKTPDFDGYGFNLHAEKGKPGQYIGKVDDGSPAETAGLKRGDRILEVNGHSIAGETHKQVVARIKERPDDAELLVIAPAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEPPKLNLQMTAAEMRAHLAAKKKFDPKKVPMDLRSKFDIVKKL

Uniprot

H9J506   A0A212F5U4   A0A2H1W8V1   A0A3S2NPD1   A0A0L7L0T2   A0A0N1IN07   + More
A0A0N1IPZ4   N6TGH6   A0A182ISA4   D6W7S4   A0A1W4XLS4   A0A3Q0INZ7   A0A1Y1MBZ0   A0A2A4JKG6   A0A0A9X6F1   A0A2R7VYU9   A0A1J1J6Q6   B7PKA3   A0A0P4VJQ9   R4G3B4   A0A1I9WLK1   T1GJC2   V4CQF1   A0A2R5LN68   A0A2A3E606   V9IK09   A0A088AUT1   R4WU03   A0A0L7QL21  

Pubmed

19121390    22118469    26227816    26354079    23537049    18362917    + More
19820115    28004739    25401762    26823975    27129103    27538518    23254933    23691247   

EMBL

BABH01025768    AGBW02010136    OWR49098.1    ODYU01006767    SOQ48914.1    RSAL01000017    + More
RVE52892.1    JTDY01003774    KOB69025.1    KQ459444    KPJ00947.1    KQ460077    KPJ17854.1    APGK01039170    KB740967    KB632399    ENN76883.1    ERL94629.1    KQ971307    EFA11238.1    GEZM01035216    JAV83339.1    NWSH01001113    PCG72547.1    GBHO01028383    GBRD01007737    GDHC01009246    JAG15221.1    JAG58084.1    JAQ09383.1    KK854177    PTY12632.1    CVRI01000074    CRL08101.1    ABJB010154035    ABJB010495367    ABJB010585195    ABJB010914788    DS731745    EEC07025.1    GDKW01001334    JAI55261.1    ACPB03015931    GAHY01001831    JAA75679.1    KU932385    APA34021.1    CAQQ02395052    KB199652    ESP04690.1    GGLE01006850    MBY10976.1    KZ288356    PBC27193.1    JR049005    AEY60831.1    AK418192    BAN21407.1    KQ414934    KOC59322.1   

Proteomes

UP000005204    UP000007151    UP000283053    UP000037510    UP000053268    UP000053240    + More
UP000019118    UP000030742    UP000075880    UP000007266    UP000192223    UP000079169    UP000218220    UP000183832    UP000001555    UP000015103    UP000015102    UP000030746    UP000242457    UP000005203    UP000053825   

PRIDE

H9J506    A0A088AUT1   

Pfam

PF17820   PDZ_6        + More
PF00595   PDZ
PF09007   EBP50_C
PF05221   AdoHcyase
PF00670   AdoHcyase_NAD

Interpro

IPR041489   PDZ_6        + More
IPR001478   PDZ       
IPR036034   PDZ_sf       
IPR015098   EBP50_C-term       
IPR000043   Adenosylhomocysteinase-like       
IPR015878   Ado_hCys_hydrolase_NAD-bd       
IPR020082   S-Ado-L-homoCys_hydrolase_CS       
IPR036291   NAD(P)-bd_dom_sf       
IPR042172   Adenosylhomocyst_ase-like_sf       

SUPFAM

SSF50156   SSF50156        + More
SSF51735   SSF51735       

Gene 3D

3.40.50.1480    

ProteinModelPortal

H9J506   A0A212F5U4   A0A2H1W8V1   A0A3S2NPD1   A0A0L7L0T2   A0A0N1IN07   + More
A0A0N1IPZ4   N6TGH6   A0A182ISA4   D6W7S4   A0A1W4XLS4   A0A3Q0INZ7   A0A1Y1MBZ0   A0A2A4JKG6   A0A0A9X6F1   A0A2R7VYU9   A0A1J1J6Q6   B7PKA3   A0A0P4VJQ9   R4G3B4   A0A1I9WLK1   T1GJC2   V4CQF1   A0A2R5LN68   A0A2A3E606   V9IK09   A0A088AUT1   R4WU03   A0A0L7QL21  

PDB

2M0U     E-value=2.32986e-21,     Score=247

KEGG

101744398    no KO assigned | (RefSeq) Na(+)/H(+) exchange regulatory cofactor NHE-RF1

GO

GO:0004013   GO:0005515   GO:0005524   GO:0004672   GO:0006468   GO:0016791   GO:0007166   GO:0016020   GO:0000287   GO:0006281   GO:0006259  

PANTHER

PTHR23420  

Length:

168

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.12165

outside

1  -  168

 

 

Pi

447.753137

Theta

216.67715

Tajima's D

3.357854

CLR

0.000241

CSRT

0.991250437478126

Interpretation

Uncertain