Gene

KWMTBOMO16022

Annotation

blastopia_polyprotein_[Lasius_niger]

Location

Bomo_Chr27(-):6368725-6372787      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.91

CDS

ATGCCGCCGAAAAAAGACTTACAAGACGCTGAAGGTGAGGAACAGGAAGTAGACGTGCATATTTCATTCAAAGACTTGGAGAAGTCGATGAACATATTTACCGGAGATGACACCTACCCGATTGAGACATTTCTTGACGAATTCGAAGACGTGGCACAGATCATGAATTGGACTAAAGTCGAAAAATTGATTTACGCAAAAAGACTCTTAGATGGAACTGCCAAGCTTTTCTTACGATCTATGGGAAGGATAAAAGACTACGCAACCTTGAAGAATGCTCTTAAAGAAGAGTTCGGTCCCAAAATTAACAGCGCAGTTGTACACAAAAAACTTGCTTCGCGTAAAATGAAGAATGACGAGACATATCAACAATACTTCTTGTCGATGAAAGAGTTAGCCCTACATGGTAAAGTTGAGGACGCTGCGCTAATAGAATACGTCATAGATGGCATTCGTGACATTGAAGCCAATAAAGCAATTCTGTACGGTGCAGCAGACATAAAAGAATTTCGAAAGAAGTTGGACATCTATAGTGAATTTAGAAAGAAGATGTCTGCTAGACCTTCTCATTCTGGCCAGTCGTCTGCAAGTCACATAACCCATAAGAAGACTCATGTGAAAAGGTGTTTCAACTGTGGCGACTTGGACCATCAAGCACCTGCCTGTCCAAAAGGAATCAAATGTTTTAAATGTAACGAGTTTGGCCACAAATCTACAGACTGTACAAGTAATAAAACTAAGAAGTCTCTGAACATTCTAAATAAAAGTGAAGAAGAGAAAGTTCCCTACAAGAAGATAAAGATTAATGAAACAGAAATGATAGCGCTAATAGACACAGGAAGCGATGTTAATTTGATTAGGATGACTGAAGCTGAAAGGATTACGAAAGACGCATTGAATAATCAAAATAACTCTAAGATATGCTTGACAGGTATAGCTGAAAAGGAGGTATACACAAAAGGAGTCTTTAATGCAAGATTACAAATAGATGATTGTTACGCTGATATAACATTCTACATTGTCCAAGATAATGACATACCTGTAAATGTGATTTTGGGAAACCCTATATTGAGAGAATTTGAAGTTAATTTTACTGCAAATGGGATTTTTGTTGAAAAAATTGTATATCTTACGCTATTAACTGAAGAGAAAAATATCTACAATGAAAATGATACAATTAAATCAGAAAATTCAGAGAAAATTAGAAAAATAATAGAAGAATATAAACCTAACAAAGTAAAGAGAGAAAGTAACGTTGAAATGAAGATTATACTTACCGACGACGAACCAATACATCAAAATCCGCGACGACTTTCACCCCTGGAAATGAAGACGGTTAATGAACAGATAAAAGAATGGATAGAACAAGAGATAATACAACCAAGCAAATCTGACTACGCAAGCCCTGTGGTACTAGCTAATAAGAAAGATGGAACTTACCGACTATGCGTTGACTACCGAAGACTGAATAAGAAGATAATAAAAGACCGGTTCCCATTACCACTGATCGAAGACCAAATAGACAAACTAAAGGAAGCGAAAGTGTACTCGACGCTAGATTTGAAAAATGGATTCATGCACGTTAACGTCCATAAAGATAGCAGGAAATATACGTCGTTTGTTACGCCCCAAGGCCAATACGAATTTCTTAAAATGCCTTTCGGTCTCTGCACAGCGCCATCTGTATTTCAAAGATTCATCAATAACATCTTTCAAGATCTTATCTCAAATGGCACTGTCCTGGCATATCTCGATGATCTTATTGTTCCAGCAAAGACAGAAGAAGAAGGACTGATAAAGTTAGAAAAGGTATTTAAAAGAGCTGCAGAATTTGGTTTACAATTTAACTACAAGAAATGCCATTTCATGAAAAAAGAAATAGAGTATCTGGGCTATGCCATCAAAGATAATGAGGTTCGGCCATCAAAAGAAAAGATTGCCGCGGTGTCTAAATTTAAAATACCACACAATGTAAAATTACTACAATCATTTCTCGGACTCACTGGATATTTTAGAAAGTTTGTAAGAAACTACTCTTTGATCGCAAAACCATTAACGAATCTTTTGAAGAACGATGCCGAGTTCAATTTTGACGATGAATGTGAAAAGGCTTTTATTGAACTAAAGAAGATACTTTGTGGATCGCCAGTTCTCCAAATTTTCAACCCCGATTATGAAACAGAAATTCATACAGACGCAAGCATGGATGGATACGGAGCTGTCCTATTACAGAAATGCCCTAAAGACAATCTAATGCACCCTGTTTATTATATGAGTAAGAAAACGACACCAGCTGAGAGGAAATACCACAGCTATTATTTAGAAATTTTAGCTATAGTTGCTGCTATTAAGAAGTTCCGAGTTTACGTTTTGGGAATACATTTTAAAATAGTAACCGATTGTTCTGCCCTAACAATGACTTTGCAGAAAAAGGATCTGCCACCGAGAGTCGCCCGTTGGGCTCTGCTCCTCGAAGAATACGATTATGAAATTGAACACAGGCCAGGATCAAGAATGAAGCACGCTGACGCTTTGAGTAGACATCCAGTTTGTTTGATTCTCACTGAAACGATGGCTCGTTTGAGGAAAGCACAGAATGAAGATGAACGAATAAGACTAATAAAAACAATTTTAGAGAAAGAAAATTATCAAGACTACATTATACAGCAAGACATACTTTACAAAGAGAAGGAAGGAAATAGATTGATTGTTATACCTAAAAAAATGCAGTACGAGATCATTCGTAAAAACCATGAGAGAGGACACTTTGGTATTACAAAAACAGAAGAATTAATCAACAGAGAATATTATATTGAGAATTTACAAGATAAGATAAGAAAAGTTATAGATAACTGCGTTGAATGCATTCTCATATCGCACAAGAGAGGTAAAAGGGAAGGACTATTACACCCGATAGACAAAGGCAATGTTCCATTATCAACATACCACATTGATCATCTCGGACCTTTGACATCTACTCATAAAAATTACAAGTATATCTTCACCGTTGTTGACGCTTATACCAAATTTACCTGGATTTACCCTGTTAAGACTCTTACCGCTCTAGAGACGGTAGAAAAGTTAAGACTGCAACAGCAAACTTTCGGGTCACCAGAAAGGATTATTACTGATCGAAACGCCGCATTTACTGCAAATGAATTTCAAGAGTATTGCCGTAATGAAAATATTACACACTATACGATTACTACAGGACAACCCAGAGGAAATGGCCAGGTCGAAAGGATTCATCAGATTATCATTGCCGTGTTGAGCAAGCTCAGCGCTGATGATCCGACCAAATGGTATCGCCGTGTGTCTGTAGTACAACGCTGTCTGAATGGTACCTACCAAAGAAGCATAGGAATGACGCCATTTGAATTACTCTTTGGCACTAAAATAAAAGATAAAGACGATGATGAACTTAAGAAGTTAATAGAGGAAGAAGAAATACAAATGTTTAAAGAAAAAAGACAAGAGCTGAGAGAAAAAGCTAAAGAATCGCTACTGAAGATACAAGAAGAAAACATAAAAAATTATAACAGAAAGAGAAAAGAAGCGACGTCTTACAAAGTTGGCGATTTAGTTGCAATCAAGAAAACGCAGTTCTCTCAAGGCAGTAAATTATTTCCTAAGTACCTAGGACCTTATGAAGTCTTAAAAAACAAAGGAAATGACCGATATGTTGTGAAGAAAGTTGGAAATACAGAAGGTCCAATCAACACGACTTCTTCTGCTGATTTCATGAAACCATGGGTCACGTCGGAAGAAAATTATTCATCTGGGTCAGATGATTAA

Protein

MPPKKDLQDAEGEEQEVDVHISFKDLEKSMNIFTGDDTYPIETFLDEFEDVAQIMNWTKVEKLIYAKRLLDGTAKLFLRSMGRIKDYATLKNALKEEFGPKINSAVVHKKLASRKMKNDETYQQYFLSMKELALHGKVEDAALIEYVIDGIRDIEANKAILYGAADIKEFRKKLDIYSEFRKKMSARPSHSGQSSASHITHKKTHVKRCFNCGDLDHQAPACPKGIKCFKCNEFGHKSTDCTSNKTKKSLNILNKSEEEKVPYKKIKINETEMIALIDTGSDVNLIRMTEAERITKDALNNQNNSKICLTGIAEKEVYTKGVFNARLQIDDCYADITFYIVQDNDIPVNVILGNPILREFEVNFTANGIFVEKIVYLTLLTEEKNIYNENDTIKSENSEKIRKIIEEYKPNKVKRESNVEMKIILTDDEPIHQNPRRLSPLEMKTVNEQIKEWIEQEIIQPSKSDYASPVVLANKKDGTYRLCVDYRRLNKKIIKDRFPLPLIEDQIDKLKEAKVYSTLDLKNGFMHVNVHKDSRKYTSFVTPQGQYEFLKMPFGLCTAPSVFQRFINNIFQDLISNGTVLAYLDDLIVPAKTEEEGLIKLEKVFKRAAEFGLQFNYKKCHFMKKEIEYLGYAIKDNEVRPSKEKIAAVSKFKIPHNVKLLQSFLGLTGYFRKFVRNYSLIAKPLTNLLKNDAEFNFDDECEKAFIELKKILCGSPVLQIFNPDYETEIHTDASMDGYGAVLLQKCPKDNLMHPVYYMSKKTTPAERKYHSYYLEILAIVAAIKKFRVYVLGIHFKIVTDCSALTMTLQKKDLPPRVARWALLLEEYDYEIEHRPGSRMKHADALSRHPVCLILTETMARLRKAQNEDERIRLIKTILEKENYQDYIIQQDILYKEKEGNRLIVIPKKMQYEIIRKNHERGHFGITKTEELINREYYIENLQDKIRKVIDNCVECILISHKRGKREGLLHPIDKGNVPLSTYHIDHLGPLTSTHKNYKYIFTVVDAYTKFTWIYPVKTLTALETVEKLRLQQQTFGSPERIITDRNAAFTANEFQEYCRNENITHYTITTGQPRGNGQVERIHQIIIAVLSKLSADDPTKWYRRVSVVQRCLNGTYQRSIGMTPFELLFGTKIKDKDDDELKKLIEEEEIQMFKEKRQELREKAKESLLKIQEENIKNYNRKRKEATSYKVGDLVAIKKTQFSQGSKLFPKYLGPYEVLKNKGNDRYVVKKVGNTEGPINTTSSADFMKPWVTSEENYSSGSDD

Uniprot

J9JZ77   A0A023EYF0   A0A023F013   A0A0A1XB16   A0A0J7K9X8   J9JQ65   + More
A0A023EY26   A0A023EZG2   A0A023EYH9   A0A1W7R6L8   A0A0J7K890   A0A0J7KLK4   A0A0J7NF11   W8C8Q1   W8B0V9   A0A0A1XFE9   X1X261   W8APB2   A0A2A4J7U9   A0A2M4AEU2   A0A034VAM6   A0A0A1WKC8   A0A034VKV9   Q24262   A0A034VLR3   A0A2M4CKM2   Q961S4   A0A224XHR1   A0A1Y1MFA9   A0A2S2NKJ2   J9LBS9   A0A2H8TRV6   A0A2S2PFS2   A0A2S2NFQ4   X1WPP0   X1X5H2   J9JJ45   A0A1W7R6R7   X1XU22   A0A2S2P032   X1XU14   A0A1W7R6H1   A0A2S2PGQ9   X1XD76   A0A1W7R6G2   A0A0J7KEC9   A0A2S2QVZ0   T1PMR9   A0A0C9RXL6   A0A1W7R6G1   A0A194R1L3   X1XU38   B7S8P8   A0A139WJA1   A0A0J7KJ08   J9L2R5   A0A034WRX5   A0A2S2PH69   A0A2S2PD17   J9KMH9   A0A0A9Z954   J9K875   A0A146M2J2   A0A0A9X1Z8   A0A2S2N9B2  

Pubmed

25474469    25830018    24495485    25348373    8055714    28004739    + More
26354079    18362917    19820115    25401762    26823975   

EMBL

ABLF02014660    ABLF02042774    GBBI01004549    JAC14163.1    GBBI01004613    JAC14099.1    + More
GBXI01005773    JAD08519.1    LBMM01010976    KMQ87102.1    ABLF02005846    GBBI01004477    JAC14235.1    GBBI01004551    JAC14161.1    GBBI01004550    JAC14162.1    GEHC01000930    JAV46715.1    LBMM01011782    KMQ86633.1    LBMM01005919    KMQ91096.1    KMQ91095.1    GAMC01007326    JAB99229.1    GAMC01015907    JAB90648.1    GBXI01004632    JAD09660.1    ABLF02005127    ABLF02005129    ABLF02007401    GAMC01020207    JAB86348.1    NWSH01002797    PCG67520.1    GGFK01005990    MBW39311.1    GAKP01019383    JAC39569.1    GBXI01015151    JAC99140.1    GAKP01016235    JAC42717.1    Z27119    CAA81643.1    GAKP01016237    JAC42715.1    GGFL01001689    MBW65867.1    AY050234    AAK84933.1    GFTR01008753    JAW07673.1    GEZM01033083    JAV84424.1    GGMR01005091    MBY17710.1    ABLF02041876    GFXV01005120    MBW16925.1    GGMR01015682    MBY28301.1    GGMR01003388    MBY16007.1    ABLF02033943    ABLF02042737    ABLF02004401    ABLF02013544    ABLF02013550    ABLF02008401    ABLF02008404    GEHC01000880    JAV46765.1    ABLF02017401    GGMR01009949    MBY22568.1    ABLF02003120    ABLF02004015    ABLF02057179    ABLF02066208    GEHC01000876    JAV46769.1    GGMR01016004    MBY28623.1    ABLF02022032    GEHC01000888    JAV46757.1    LBMM01008871    KMQ88569.1    GGMS01012726    MBY81929.1    KA649989    AFP64618.1    GBYB01013920    JAG83687.1    GEHC01000891    JAV46754.1    KQ460883    KPJ11409.1    ABLF02024793    EF710649    ACE75273.1    KQ971338    KYB27887.1    LBMM01006880    KMQ90234.1    ABLF02008946    GAKP01001563    JAC57389.1    GGMR01015939    MBY28558.1    GGMR01014665    MBY27284.1    ABLF02028808    GBHO01040010    GBHO01001812    JAG03594.1    JAG41792.1    ABLF02002940    ABLF02002941    ABLF02002942    ABLF02048237    ABLF02057838    ABLF02061919    ABLF02067277    GDHC01004980    JAQ13649.1    GBHO01030786    JAG12818.1    GGMR01000717    MBY13336.1   

Proteomes

UP000007819    UP000036403    UP000218220    UP000053240    UP000007266   

PRIDE

Q24262    Q961S4   

Pfam

PF00098   zf-CCHC        + More
PF00665   rve
PF17921   Integrase_H2C2
PF00078   RVT_1
PF17917   RT_RNaseH
PF17919   RT_RNaseH_2
PF02037   SAP
PF09668   Asp_protease
PF00077   RVP
PF03732   Retrotrans_gag
PF12384   Peptidase_A2B
PF13873   Myb_DNA-bind_5
PF16064   DUF4806
PF14392   zf-CCHC_4

Interpro

IPR021109   Peptidase_aspartic_dom_sf        + More
IPR001584   Integrase_cat-core       
IPR036875   Znf_CCHC_sf       
IPR012337   RNaseH-like_sf       
IPR000477   RT_dom       
IPR041373   RT_RNaseH       
IPR036397   RNaseH_sf       
IPR041588   Integrase_H2C2       
IPR001878   Znf_CCHC       
IPR041577   RT_RNaseH_2       
IPR036361   SAP_dom_sf       
IPR001969   Aspartic_peptidase_AS       
IPR001995   Peptidase_A2_cat       
IPR003034   SAP_dom       
IPR019103   Peptidase_aspartic_DDI1-type       
IPR018061   Retropepsins       
IPR005162   Retrotrans_gag_dom       
IPR024650   Peptidase_A2B       
IPR034145   RP_RTVL-H-like       
IPR028002   Myb_DNA-bind_5       
IPR032071   DUF4806       
IPR034122   Retropepsin-like_bacterial       
IPR025836   Zn_knuckle_CX2CX4HX4C       

SUPFAM

SSF57756   SSF57756        + More
SSF53098   SSF53098       
SSF50630   SSF50630       
SSF68906   SSF68906       

Gene 3D

2.40.70.10     3.30.420.10     1.10.720.30    

CDD

cd06095  RP_RTVL_H_like
cd05483  retropepsin_like_bacteria

ProteinModelPortal

J9JZ77   A0A023EYF0   A0A023F013   A0A0A1XB16   A0A0J7K9X8   J9JQ65   + More
A0A023EY26   A0A023EZG2   A0A023EYH9   A0A1W7R6L8   A0A0J7K890   A0A0J7KLK4   A0A0J7NF11   W8C8Q1   W8B0V9   A0A0A1XFE9   X1X261   W8APB2   A0A2A4J7U9   A0A2M4AEU2   A0A034VAM6   A0A0A1WKC8   A0A034VKV9   Q24262   A0A034VLR3   A0A2M4CKM2   Q961S4   A0A224XHR1   A0A1Y1MFA9   A0A2S2NKJ2   J9LBS9   A0A2H8TRV6   A0A2S2PFS2   A0A2S2NFQ4   X1WPP0   X1X5H2   J9JJ45   A0A1W7R6R7   X1XU22   A0A2S2P032   X1XU14   A0A1W7R6H1   A0A2S2PGQ9   X1XD76   A0A1W7R6G2   A0A0J7KEC9   A0A2S2QVZ0   T1PMR9   A0A0C9RXL6   A0A1W7R6G1   A0A194R1L3   X1XU38   B7S8P8   A0A139WJA1   A0A0J7KJ08   J9L2R5   A0A034WRX5   A0A2S2PH69   A0A2S2PD17   J9KMH9   A0A0A9Z954   J9K875   A0A146M2J2   A0A0A9X1Z8   A0A2S2N9B2  

PDB

4OL8     E-value=1.02028e-74,     Score=717

KEGG

NA   

GO

GO:0015074   GO:0008270   GO:0003676   GO:0004190   GO:0003964   GO:0016021   GO:0006508   GO:0007166   GO:0016020   GO:0000287   GO:0006281   GO:0006259  

Length:

1264

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00306

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00002

outside

1  -  1264

 

 

Pi

146.737932

Theta

78.136975

Tajima's D

1.54994

CLR

0.144955

CSRT

0.8017599120044

Interpretation

Uncertain