Gene

KWMTBOMO16018

Annotation

hypothetical_protein_RR46_04071_[Papilio_xuthus]

Location

Bomo_Chr27(+):6139146-6141397      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.706

CDS

ATGTTCCAAAGCTCGAGTAGCTTCTGTGAATCCGATGACTATTCCAAGACTCGAGCTATGCGCGTGCGTCCTGGGCGCACAGTTGGTACCATTTTGGAATCGACTGACATTTCTGAGTGGCGTCATGTGCCAACGTCGTGTAATCCTGCAGATTTAGCTTCACGTGGTTTGGATGTGTCTGCACCTCCTCAGATGGATCTTTGGTGGAACGGCCCAAAGTTCTTGAAAGAAAGCAAGAATGAGTGGCCAGCATTGTTTAACCACCGCCATCCCACTGATGATTTGCCGGAAATAAAGATTAATTTAGTGAACACATCTAAAAACATGATACAGACATTAATACATTTTGATAGAAACAAACCCAATAAAAAGAATGGTATATTGCAGCCTGATGAGCTCATCAATTCATTTGAAACTTTAGTGAGATTAGCTCAGAAGGATAGTTTTAGTACTGAACTAGCCACAATCGATAATAAAGGCGTGCTGAGTCCGAACAATCCTTTAATTTCCTTAAGCCCGTTTATTGATGATAAGGGTATATTACGTGTAGGTGGTCGTTTAAACTATTCTTGTCAGATTTACGACAAACGTCATCCTATGCTACTACATGCGAAGCATAAATTGACAAAACTATTGTTCCAGCAAGAACATTTACGTCTTCTGCACGCTGCCCCACAGTTACTACTGTCCACTGTCAGAGAGTTCGTCTGGCCCATAGCGGGCAGAGATCTGGCACGTGCTACTGTGAGACAATGCATTGTATGCAGGCGGGCAAGTGCTAAGATGCTTGCACCTATGATGGGCGCATTACCCAGTCAACGCGTTGATCCTGACTTCCCCTTTATAAGTGCTGGTATTGATTTTTGTGGACCTTTCTTAATAACTGATAGGAAGGGTAGAGGGTGTAAGATATCGAAATGTTATATGTGCGTTTTTGTCTGCCTCAGATACAAATGTTTGCATTTAGAAGCCGTAAGCGACCTCACCAAAGAGGCATTCATATTATCGTTGCGTCGTTTTATCTCTCGCCGAGGTAAGCCGAAGGAGATTTTCTGCGATAATGGCAGAAACTTCGTATCTGCATCCAAAGAAATTACAGAATTTGTGAACTCTCATGCTGATGGCGTCGGTGGATTCCTTTCTAGTGAAGGGATTGATTTTAAATTTCAACCGGCATATGCACCACACTTCGGGGGTCTATGGGAGGCGTCAGTCAAATCAGCCAAATTTCATTTGAAAAGAATTCTCGATAACACTCACTGCACATTTGAAGAATTAGCTACTTTGTTTAATCAAATCGAAGCCATACTCAATAGCAGGCCTTTATGTCCCTTATCTTCCTCTCCTGATGACCTTGCTCCTCTGACTCCCGGACACTTCCTCATTGGAAGACCTTTGACGTCGTTGCCATCACCTAACTACATGCAACTTAGTACCTCTAGATTGAACCGATACCAACACTTGGAGCAGATTCGTCAACATTTTTGGAATCGATGGCAGCTAGAGTACTTGAACGAATTACAGCAAAGACACAAATGGCGCGTACCAGCAAGATCAATCCAGAATGGTGACTTAGTTCTACTGAAGGACGAGAATATTCCACCGATGCAATGGCGGACGGGTCGAGTCATCAACCTATTTCCAGGAAAGGACAATATCGTGCGAGTAGCCGAAATCAAAACTTCGACTGGCGTTTATCGGCGTGGACTTCGATATCTTTGTCCTCTATTGGATACTGCAGAAGATTCTTCATTGGAAGCAAATGCTTCCAAGGCCCCGGAGGATGTTAAGGATCTCTAA

Protein

MFQSSSSFCESDDYSKTRAMRVRPGRTVGTILESTDISEWRHVPTSCNPADLASRGLDVSAPPQMDLWWNGPKFLKESKNEWPALFNHRHPTDDLPEIKINLVNTSKNMIQTLIHFDRNKPNKKNGILQPDELINSFETLVRLAQKDSFSTELATIDNKGVLSPNNPLISLSPFIDDKGILRVGGRLNYSCQIYDKRHPMLLHAKHKLTKLLFQQEHLRLLHAAPQLLLSTVREFVWPIAGRDLARATVRQCIVCRRASAKMLAPMMGALPSQRVDPDFPFISAGIDFCGPFLITDRKGRGCKISKCYMCVFVCLRYKCLHLEAVSDLTKEAFILSLRRFISRRGKPKEIFCDNGRNFVSASKEITEFVNSHADGVGGFLSSEGIDFKFQPAYAPHFGGLWEASVKSAKFHLKRILDNTHCTFEELATLFNQIEAILNSRPLCPLSSSPDDLAPLTPGHFLIGRPLTSLPSPNYMQLSTSRLNRYQHLEQIRQHFWNRWQLEYLNELQQRHKWRVPARSIQNGDLVLLKDENIPPMQWRTGRVINLFPGKDNIVRVAEIKTSTGVYRRGLRYLCPLLDTAEDSSLEANASKAPEDVKDL

Uniprot

A0A194QJ48   A0A194RAG7   A0A194RGQ8   A0A0N0PBK0   A0A2A4JBY8   A0A3S2P7Y4   + More
A0A2A4JM97   A0A0J7KBV8   A0A0N1I390   A0A1Y1MWL6   A0A151IGU0   A0A1Y1MY22   A0A0N1IBH6   A0A1B6CM38   A0A2A4IUY1   A0A139W8E1   A0A0J7K7S0   A0A151IIX4   A0A2L2YLT6   D7GYB7   A0A2A4IUL3   A0A194RI04   A0A226DAU7   A0A2S2PI44   A0A1Y1L2Y2   A0A0N1IPF2   A0A2S2PUJ2   A0A182GXQ1   E9J9Y8   J9LHB7   A0A151ILS3   A0A1Y1MD76   A0A3L8DC69   A0A0J7KD18   A0A069DYA1   E2ARC4   A0A0J7KE03   A0A226EPI5   A0A151ICQ0   A0A226D417   A0A1Y1L369   A0A2S2N7B6   A0A151J2Q1   J9KLD6   A0A3L8DEE4   X1WL76   A0A226CW75   A0A3L8DF94   A0A151J2Q3   A0A0A9Z327   A0A0J7KCV7   A0A1U7XZ01   A0A0J7JZS0   A0A1B6EB86   X1XU48   X1WNQ0   A0A1Y1MTT1   A0A1Y1N1H8   J9L1T6   A0A2S2PTX9   X1X1I2   A0A2S2PNZ4   A0A2L2YSY1   D6X1G6   X1XU25   A0A1Y1MYB7   A0A224XG39   A0A146KLP5   A0A226EUF5   Q8IH60   A0A1Y1N6J9   A0A0J7KCI2   A0A0J7N5C9   A0A0A9Z2M8   A0A0J7N536   J9LVB4   A0A1U8N896   J9K774   J9K169   A0A1Y1N3M1   Q8MRT3   A0A0J7NFF3   A0A0J7N890   A0A023EZK8   A0A226DMG9   A0A3L8D7N7   A0A3L8D7Q9   J9KBH1   X1XMQ5   A0A2S2QE97   A0A226CWA5   X1X7H4   A0A0J7KD57   X1XB48   A0A226E226   A0A1Y1JX04   A0A2S2NLW5   A0A226EUK6  

Pubmed

26354079    28004739    18362917    19820115    26561354    26483478    + More
21282665    30249741    26334808    20798317    25401762    23773524    26823975    25893780    25474469   

EMBL

KQ458793    KPJ04955.1    KQ460500    KPJ14270.1    KQ460211    KPJ16510.1    + More
KQ460970    KPJ10166.1    NWSH01001945    PCG69607.1    RSAL01000222    RVE44041.1    NWSH01001014    PCG73111.1    LBMM01009941    KMQ87772.1    KQ459256    KPJ02096.1    GEZM01018697    JAV90052.1    KQ977667    KYN00648.1    GEZM01018702    JAV90048.1    KQ459312    KPJ01687.1    GEDC01022769    JAS14529.1    NWSH01006923    PCG63188.1    KQ973442    KXZ75531.1    LBMM01012392    KMQ86241.1    KQ977454    KYN02594.1    IAAA01034021    IAAA01034022    LAA09083.1    GG695382    EFA13346.1    PCG63186.1    KQ460205    KPJ16960.1    LNIX01000026    OXA42260.1    GGMR01016490    MBY29109.1    GEZM01068861    GEZM01068860    JAV66730.1    KQ460545    KPJ14069.1    GGMR01020500    MBY33119.1    JXUM01095929    KQ564232    KXJ72556.1    GL769615    EFZ10365.1    ABLF02022040    ABLF02056888    KQ977096    KYN05838.1    GEZM01039657    JAV81297.1    QOIP01000010    RLU18065.1    LBMM01009284    KMQ88247.1    GBGD01000063    JAC88826.1    GL442026    EFN64015.1    LBMM01009062    KMQ88421.1    LNIX01000002    OXA59522.1    KQ978021    KYM98106.1    LNIX01000036    OXA39969.1    GEZM01066272    JAV68024.1    GGMR01000448    MBY13067.1    KQ980379    KYN16310.1    ABLF02013940    ABLF02036313    ABLF02066938    ABLF02066950    QOIP01000009    RLU18850.1    ABLF02041863    LNIX01000063    OXA37199.1    RLU19130.1    KQ980343    KYN16364.1    GBHO01007402    GBHO01007399    JAG36202.1    JAG36205.1    LBMM01009403    KMQ88162.1    LBMM01018894    KMQ83668.1    GEDC01002296    GEDC01002113    JAS35002.1    JAS35185.1    ABLF02018371    ABLF02041860    GEZM01021505    JAV88969.1    GEZM01018628    JAV90116.1    ABLF02016025    ABLF02036166    ABLF02036168    ABLF02041862    GGMR01020322    MBY32941.1    ABLF02018584    ABLF02039341    ABLF02042408    ABLF02065916    GGMR01018506    MBY31125.1    IAAA01051064    LAA11179.1    KQ971371    EFA09479.1    ABLF02016767    ABLF02016770    GEZM01018619    JAV90138.1    GFTR01008874    JAW07552.1    GDHC01021148    JAP97480.1    OXA60848.1    BT001400    AAN71155.1    GEZM01013857    JAV92285.1    LBMM01009688    KMQ87939.1    LBMM01009746    KMQ87900.1    GBHO01005508    GBHO01005504    JAG38096.1    JAG38100.1    LBMM01009898    KMQ87805.1    ABLF02004142    ABLF02023723    ABLF02024568    GEZM01018629    GEZM01018623    JAV90127.1    AY119280    AAM51140.1    LBMM01005719    KMQ91270.1    KMQ91271.1    LBMM01008464    KMQ88855.1    GBBI01004032    JAC14680.1    LNIX01000016    OXA46198.1    QOIP01000012    RLU16284.1    RLU15928.1    ABLF02018588    ABLF02018590    ABLF02042430    ABLF02043851    GGMS01006810    MBY76013.1    LNIX01000069    OXA36894.1    LBMM01009442    KMQ88136.1    ABLF02066803    LNIX01000007    OXA51795.1    GEZM01103137    GEZM01103136    JAV51536.1    GGMR01005535    MBY18154.1    LNIX01000001    OXA61293.1   

Proteomes

UP000053268    UP000053240    UP000218220    UP000283053    UP000036403    UP000078542    + More
UP000007266    UP000198287    UP000069940    UP000249989    UP000007819    UP000279307    UP000000311    UP000078492    UP000189701    UP000189702   

PRIDE

Q8IH60    Q8MRT3   

Pfam

PF03564   DUF1759        + More
PF18701   DUF5641
PF00665   rve
PF05380   Peptidase_A17
PF17921   Integrase_H2C2
PF05585   DUF1758
PF00078   RVT_1
PF14529   Exo_endo_phos_2

Interpro

IPR001584   Integrase_cat-core        + More
IPR001995   Peptidase_A2_cat       
IPR012337   RNaseH-like_sf       
IPR008042   Retrotrans_Pao       
IPR040676   DUF5641       
IPR021109   Peptidase_aspartic_dom_sf       
IPR008737   Peptidase_asp_put       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR005312   DUF1759       
IPR001878   Znf_CCHC       
IPR000477   RT_dom       
IPR001606   ARID_dom       
IPR001969   Aspartic_peptidase_AS       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR036875   Znf_CCHC_sf       
IPR000727   T_SNARE_dom       

SUPFAM

SSF53098   SSF53098        + More
SSF56219   SSF56219       
SSF57756   SSF57756       

Gene 3D

2.40.70.10     3.30.420.10     3.60.10.10    

ProteinModelPortal

A0A194QJ48   A0A194RAG7   A0A194RGQ8   A0A0N0PBK0   A0A2A4JBY8   A0A3S2P7Y4   + More
A0A2A4JM97   A0A0J7KBV8   A0A0N1I390   A0A1Y1MWL6   A0A151IGU0   A0A1Y1MY22   A0A0N1IBH6   A0A1B6CM38   A0A2A4IUY1   A0A139W8E1   A0A0J7K7S0   A0A151IIX4   A0A2L2YLT6   D7GYB7   A0A2A4IUL3   A0A194RI04   A0A226DAU7   A0A2S2PI44   A0A1Y1L2Y2   A0A0N1IPF2   A0A2S2PUJ2   A0A182GXQ1   E9J9Y8   J9LHB7   A0A151ILS3   A0A1Y1MD76   A0A3L8DC69   A0A0J7KD18   A0A069DYA1   E2ARC4   A0A0J7KE03   A0A226EPI5   A0A151ICQ0   A0A226D417   A0A1Y1L369   A0A2S2N7B6   A0A151J2Q1   J9KLD6   A0A3L8DEE4   X1WL76   A0A226CW75   A0A3L8DF94   A0A151J2Q3   A0A0A9Z327   A0A0J7KCV7   A0A1U7XZ01   A0A0J7JZS0   A0A1B6EB86   X1XU48   X1WNQ0   A0A1Y1MTT1   A0A1Y1N1H8   J9L1T6   A0A2S2PTX9   X1X1I2   A0A2S2PNZ4   A0A2L2YSY1   D6X1G6   X1XU25   A0A1Y1MYB7   A0A224XG39   A0A146KLP5   A0A226EUF5   Q8IH60   A0A1Y1N6J9   A0A0J7KCI2   A0A0J7N5C9   A0A0A9Z2M8   A0A0J7N536   J9LVB4   A0A1U8N896   J9K774   J9K169   A0A1Y1N3M1   Q8MRT3   A0A0J7NFF3   A0A0J7N890   A0A023EZK8   A0A226DMG9   A0A3L8D7N7   A0A3L8D7Q9   J9KBH1   X1XMQ5   A0A2S2QE97   A0A226CWA5   X1X7H4   A0A0J7KD57   X1XB48   A0A226E226   A0A1Y1JX04   A0A2S2NLW5   A0A226EUK6  

KEGG

101745651    no KO assigned | (RefSeq) uncharacterized LOC101745651

GO

GO:0003676   GO:0004190   GO:0015074   GO:0008270   GO:0003677   GO:0016021   GO:0003964   GO:0043565   GO:0005874   GO:0007017   GO:0007166   GO:0016020   GO:0000287   GO:0006281   GO:0006259  

Length:

599

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0013

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00026

outside

1  -  599

 

 

Pi

136.68709

Theta

125.608304

Tajima's D

-0.745542

CLR

181.616134

CSRT

0.189190540472976

Interpretation

Uncertain