Gene

KWMTBOMO16002  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004606

Annotation

small_heat_shock_protein_19.3_[Spodoptera_litura]

Location

Bomo_Chr27(-):5782645-5783256      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.574

CDS

ATGTCTCTGCTACCTTACATCTTTGACTACGACGCGCCTCGATGGCCGAGAAGACTTCTCGACCAAAATTTCGGGCTCACGATCACACCGGAAGACCTTTTGAACGCAGCTACCAGCCCCGTGGTGCCGCGCCTCAGACCGTGGTGGCCGAAAGACGCCGGTTCTTCAATCAAAGCTGACAAGGACAAGTGGCAGATCAACGTGGACGTGCAGCACTTCGCTCCCGACGAGGTCACGGTCAAAATCGCCGATGGGTACATCGTCATCGAGGGTAAACACGAGGAGAAGCAGGATGAGCACGGTTACATTTCGCGGCAGTTCGTGAGAAGGTTCAAGCTGCCTGATGACAGCAATCCTGACGCGGTCGCATCGAGGCTTTCTTCAGATGGAGTCCTCACAGTGGTGGCTCCGAGACAAGCTGAGGCTTCAAAGAACGAGAGAGACGTTCCCATAACGCACACCGGACCGGTTCGGAAGGAGATTACAGAAGAAACTCCGAGCAAGTGA

Protein

MSLLPYIFDYDAPRWPRRLLDQNFGLTITPEDLLNAATSPVVPRLRPWWPKDAGSSIKADKDKWQINVDVQHFAPDEVTVKIADGYIVIEGKHEEKQDEHGYISRQFVRRFKLPDDSNPDAVASRLSSDGVLTVVAPRQAEASKNERDVPITHTGPVRKEITEETPSK

Similarity

Belongs to the small heat shock protein (HSP20) family.

Uniprot

H9J516   A0A2A4JBH7   I3QQD4   E3UKK8   A0A2W1BKY7   A0A2H1WFI4   + More
A0A2D1CSF7   A0A0K0XR50   A0A0N1INY6   A0A194Q554   A0A212EIS8   A0A0L7L9D3   A0A161GJ22   A0A3S2L9M7   A0A385PHG6   A0A220W0C8   Q9GSB6   F1C928   A0A222NUL2   A0A0K0XQY0   A0A212F0A4   A0A343EU23   A0A0A7BZ27   R9S0D1   B9VTS0   Q5R1P6   Q1AMF5   A0A212ERQ7   A0A0A7BZF0   A0A2A4J9F7   E2F397   M1FKQ7   A0A0N1PFQ5   A0A194Q5N9   A0A2A4J9J4   A0A1E1W5U5   U6BMM6   A0A2W1BHM1   A0A2H4LHL7   Q1HAT5   A0A2A4J3F8   Q0KKB1   Q5MGN8   A0A0N1INR0   Q2WG64   Q5R1P7   I4DMV4   A0A2H1W1Y8   Q2LCS7   A0A0K0XQX1   A0A0A7RE39   A0A212FIM4   A0A0A7BZM3   A0A194QB65   A0A2H1X0S0   Q5MGL1   E2F399   A0A2H1W2W7   E2F3A1   A0A0N0PBJ9   A0A0P0CJ81   O18634   A0A0C5PKY8   Q9GN07   A0A2H4LI82   A0A3S2PJT0   B9VTS8   A0A0L7K2K7   A0A222NUK8   A0A2D1CRQ9   A0A2H1W170   R9RZX9   A0A0A7BZ70   A0A212EIS5   A0A2A4JK93   A0A0A7RCH5   A0A0A7RCE5   S4NMP5   A0A2A4JUN7   A0A212FJB9   B2ZHW3   A0A075BR54   A0A2D1CRP7   R4HL93   S4P4G2   A0A2H1WH29   A0A2W1BH28   A0A2H1WKW0   A0A0K0XR51   F1C930   A0A194Q6N8   E2F398   A0A0L7L8L1   A0A2A4K9P8   D9J2L8   A0A345W859   A0A222NUM2   A0A212FBC6   H9J540   A0A2A4JLW2  

Pubmed

19121390    22957810    28756777    26196395    26354079    22118469    + More
26227816    28687981    17031055    28755305    24947609    21510953    23763950    17630658    16023793    16703614    22651552    18804477    25514417    9654738    25527122    23622113   

EMBL

BABH01025846    NWSH01002265    PCG68753.1    JQ707905    AFK14099.1    HM449882    + More
ADO33017.1    KZ150055    PZC74335.1    ODYU01008270    SOQ51706.1    KX977582    ATN45241.1    KP843903    AKS40082.1    KQ460891    KPJ10839.1    KQ459460    KPJ00668.1    AGBW02014566    OWR41397.1    JTDY01002160    KOB71979.1    KU096844    AMY63177.1    RSAL01000078    RVE48718.1    MG816464    AYA93248.1    KY701309    ASK86231.1    AF315318    AAG30945.2    HQ219475    ADX96000.1    KX958479    ASQ43195.1    KP843906    AKS40085.1    AGBW02011158    OWR47131.1    MF067296    ASM61894.1    KJ461920    AHW45922.1    KC710018    KC710022    AGM90551.1    AGM90555.1    FJ602780    ACM24346.1    AB195971    BAD74196.1    DQ063591    AAZ14792.1    AGBW02012988    OWR44131.1    KJ461916    AHW45918.1    PCG68757.1    HM046613    ADK55520.1    JQ708200    AFQ02692.1    KPJ10838.1    KPJ00669.1    PCG68755.1    GDQN01008714    JAT82340.1    KF471527    AHA36865.1    PZC74338.1    KX845562    ATB54993.1    PZC74337.1    JX491641    KC710020    AB244517    AGC23337.1    AGM90553.1    BAE94664.1    NWSH01003339    PCG66520.1    PCG66521.1    AB251898    BAF03558.1    AY829748    AAV91362.1    KPJ10837.1    AB214974    BAE48744.1    AB195970    BAD74195.1    AK402622    BAM19244.1    ODYU01005718    SOQ46842.1    DQ336356    ABC68342.2    KP843896    AKS40075.1    KM217077    KM217078    AJA32865.1    AGBW02008361    OWR53574.1    KJ461917    AHW45919.1    KPJ00666.1    ODYU01012514    SOQ58867.1    AY829747    AY829775    AAV91361.1    AAV91389.1    HM046615    ADK55522.1    SOQ46844.1    HM046617    ADK55524.1    KPJ10841.1    KR137569    ALI87024.1    U94328    AAC36146.1    KM881570    AJQ22645.1    AF315317    AF315319    FJ602772    AAG30944.1    AAG30946.1    ACM24338.1    KX845559    ATB54990.1    PZC74333.1    RSAL01000012    RVE53492.1    FJ602788    ACM24354.1    JTDY01014370    KOB52036.1    KX958476    ASQ43192.1    KX977584    ATN45243.1    SOQ46845.1    KC710019    KC710024    AGM90552.1    AGM90557.1    RVE53491.1    KJ461913    AHW45915.1    OWR41396.1    NWSH01001148    PCG72391.1    KM217079    AJA32867.1    KM217080    AJA32868.1    GAIX01014246    JAA78314.1    NWSH01000548    PCG75721.1    AGBW02008280    OWR53838.1    EU668902    ACD01216.1    KC689795    KX845561    KZ150027    AGQ42773.1    ATB54992.1    PZC74791.1    KX977585    ATN45244.1    HQ647012    AET10424.1    GAIX01009047    JAA83513.1    ODYU01008627    SOQ52368.1    KZ150133    PZC73025.1    ODYU01009326    SOQ53668.1    KP843904    AKS40083.1    HQ219477    ADX96002.1    KPJ00670.1    HM046614    ADK55521.1    JTDY01002346    KOB71621.1    NWSH01000008    PCG80951.1    HM359007    ADI48314.1    MH042022    AXJ21597.1    KX958478    ASQ43194.1    AGBW02009356    OWR51030.1    BABH01042227    PCG72390.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000283053   

PRIDE

H9J516    Q9GSB6    B9VTS0    Q5R1P6    Q5R1P7    Q9GN07    + More
B9VTS8    H9J540   

Pfam

PF00011   HSP20

Interpro

IPR008978   HSP20-like_chaperone        + More
IPR001436   Alpha-crystallin/HSP       
IPR002068   A-crystallin/Hsp20_dom       
IPR036116   FN3_sf       
IPR003961   FN3_dom       

SUPFAM

SSF49764   SSF49764        + More
SSF49265   SSF49265       

Gene 3D

2.60.40.790    

CDD

cd00063  FN3

ProteinModelPortal

H9J516   A0A2A4JBH7   I3QQD4   E3UKK8   A0A2W1BKY7   A0A2H1WFI4   + More
A0A2D1CSF7   A0A0K0XR50   A0A0N1INY6   A0A194Q554   A0A212EIS8   A0A0L7L9D3   A0A161GJ22   A0A3S2L9M7   A0A385PHG6   A0A220W0C8   Q9GSB6   F1C928   A0A222NUL2   A0A0K0XQY0   A0A212F0A4   A0A343EU23   A0A0A7BZ27   R9S0D1   B9VTS0   Q5R1P6   Q1AMF5   A0A212ERQ7   A0A0A7BZF0   A0A2A4J9F7   E2F397   M1FKQ7   A0A0N1PFQ5   A0A194Q5N9   A0A2A4J9J4   A0A1E1W5U5   U6BMM6   A0A2W1BHM1   A0A2H4LHL7   Q1HAT5   A0A2A4J3F8   Q0KKB1   Q5MGN8   A0A0N1INR0   Q2WG64   Q5R1P7   I4DMV4   A0A2H1W1Y8   Q2LCS7   A0A0K0XQX1   A0A0A7RE39   A0A212FIM4   A0A0A7BZM3   A0A194QB65   A0A2H1X0S0   Q5MGL1   E2F399   A0A2H1W2W7   E2F3A1   A0A0N0PBJ9   A0A0P0CJ81   O18634   A0A0C5PKY8   Q9GN07   A0A2H4LI82   A0A3S2PJT0   B9VTS8   A0A0L7K2K7   A0A222NUK8   A0A2D1CRQ9   A0A2H1W170   R9RZX9   A0A0A7BZ70   A0A212EIS5   A0A2A4JK93   A0A0A7RCH5   A0A0A7RCE5   S4NMP5   A0A2A4JUN7   A0A212FJB9   B2ZHW3   A0A075BR54   A0A2D1CRP7   R4HL93   S4P4G2   A0A2H1WH29   A0A2W1BH28   A0A2H1WKW0   A0A0K0XR51   F1C930   A0A194Q6N8   E2F398   A0A0L7L8L1   A0A2A4K9P8   D9J2L8   A0A345W859   A0A222NUM2   A0A212FBC6   H9J540   A0A2A4JLW2  

PDB

3J07     E-value=2.72694e-25,     Score=281

KEGG

101745277    K09542 crystallin, alpha B | (RefSeq) protein lethal(2)essential for life-like

GO

GO:0046872   GO:0005840   GO:0016021  

Length:

168

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00019

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.02296

outside

1  -  168

 

 

Pi

80.983043

Theta

73.630949

Tajima's D

0.306512

CLR

0.525389

CSRT

0.455827208639568

Interpretation

Uncertain