Gene

KWMTBOMO16001  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004540

Annotation

heat_shock_protein_hsp_19.9_[Bombyx_mori]

Location

Bomo_Chr27(+):5779097-5779771      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.708 Mitochondrial   Reliability : 1.607

CDS

ATGTCGTTGATTCCGTGGTTATTTGATTACGAAATTGAGCGTCCTCGTCGCCTCATGGATCAACATTTCGGCTTGGGGCTGACTCCGGAAGATTTTCTCAGTGCTGCAGCCGGCCCCCTTGTGAGCAGAGAATACTACCGCCCGTGGCGTCACCTTGCTGCCGCGGCTCGAGACCTTGGCTCCAGCATCAAAAGTGATAAGGATAAGTTCCAAGTAAACCTGGACGTCCAGCATTTCGCCCCGGAAGAAATCTCTGTTAAAACGGCGGACGGCTACATCGTGGTTGAAGGCAAACACGAGGAGAAGAAAGATCAGCATGGTTACATATCGCGTCAATTCACTCGTCGCTACGCTTTGCCGGAGGGCTGTACGGCTGAATCTGTGGAGTCCCGGCTGTCTTCAGATGGTGTGTTGTCTGTAATCGCACCCAGGAAGGTGCCGCCAGCAGTGGAGGGTGAACGCAAGATTCCGATCGCCCAAACCGGACCCGTGCGCAAGGAGGTGAAGGACCAATCCAACGGCGACAAGGCTTAA

Protein

MSLIPWLFDYEIERPRRLMDQHFGLGLTPEDFLSAAAGPLVSREYYRPWRHLAAAARDLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPIAQTGPVRKEVKDQSNGDKA

Similarity

Belongs to the small heat shock protein (HSP20) family.

Uniprot

Q5R1P7   Q1HAT5   A0A3S2PJT0   A0A161GJ22   Q0KKB1   A0A2H4LI82   + More
E2F3A1   A0A2H1X0S0   A0A2A4J3F8   A0A0A7RCH5   I4DMV4   A0A0A7RCE5   A0A194QB65   A0A0A7BZM3   A0A2D1CRQ9   A0A0L7K2K7   A0A0N0PBJ9   A0A222NUK8   A0A212FJB9   B2ZHW3   A0A0L7L9D3   R4HL93   A0A2W1BHM1   Q9GSB6   E2F399   A0A2H1W1Y8   A0A0K0XQX1   A0A0N1INR0   Q2LCS7   A0A2A4J9F7   A0A0A7RE39   A0A212EIS5   Q5MGN8   A0A0A7BZ70   A0A222NUL2   Q5MGL1   B9VTS8   Q1AMF5   A0A0A7BZF0   F1C928   A0A385PHG6   A0A0K0XQY0   A0A2H4LHL7   M1FKQ7   A0A343EU23   A0A0A7BZ27   A0A220W0C8   A0A2A4J9J4   A0A3S2L9M7   A0A0N1PFQ5   E2F397   S4P4G2   O18634   A0A0C5PKY8   Q9GN07   A0A212F0A4   A0A0P0CJ81   A0A194Q5N9   A0A212FIM4   A0A212ERQ7   A0A2H1W2W7   A0A194Q6N8   R9S0D1   A0A2H1W170   R9RZX9   B9VTS0   Q5R1P6   A0A1E1W5U5   A0A2A4JK93   A0A2H1WH29   E2F398   A0A075BR54   D9J2L8   A0A2A4JUN7   A0A345W859   A0A194PVM7   A0A0N0PBK3   A0A2D1CRP7   Q1AMF7   A0A212EIS8   S4NMP5   A0A222NUL9   A0A212FBC6   F1C929   A0A222NUM2   A0A2W1BH28   A0A2H1WKW0   A0A2A4K9P8   Q1AMF6   A0A0K0XR46   A0A0L7LQA9   A0A0L7L8L1   A0A2H4G808   Q0KKB2   A0A2A4JLW2   H9J540   A0A2W1BPZ5   A0A2A4JVR5   Q2WG64   A0A222NUK4  

Pubmed

17031055    19121390    17630658    28756777    21510953    25514417    + More
22651552    26354079    24947609    26227816    28755305    22118469    18804477    26196395    16023793    23763950    28687981    23622113    9654738    25527122    16703614   

EMBL

BABH01025846    AB195970    BAD74195.1    JX491641    KC710020    AB244517    + More
AGC23337.1    AGM90553.1    BAE94664.1    RSAL01000012    RVE53492.1    KU096844    AMY63177.1    AB251898    BAF03558.1    KX845559    KZ150055    ATB54990.1    PZC74333.1    HM046617    ADK55524.1    ODYU01012514    SOQ58867.1    NWSH01003339    PCG66520.1    PCG66521.1    KM217079    AJA32867.1    AK402622    BAM19244.1    KM217080    AJA32868.1    KQ459460    KPJ00666.1    KJ461917    AHW45919.1    KX977584    ATN45243.1    JTDY01014370    KOB52036.1    KQ460891    KPJ10841.1    KX958476    ASQ43192.1    AGBW02008280    OWR53838.1    EU668902    ACD01216.1    JTDY01002160    KOB71979.1    HQ647012    AET10424.1    PZC74338.1    AF315318    AAG30945.2    HM046615    ADK55522.1    ODYU01005718    SOQ46842.1    KP843896    AKS40075.1    KPJ10837.1    DQ336356    ABC68342.2    NWSH01002265    PCG68757.1    KM217077    KM217078    AJA32865.1    AGBW02014566    OWR41396.1    AY829748    AAV91362.1    KJ461913    AHW45915.1    KX958479    ASQ43195.1    AY829747    AY829775    AAV91361.1    AAV91389.1    FJ602788    ACM24354.1    DQ063591    AAZ14792.1    KJ461916    AHW45918.1    HQ219475    ADX96000.1    MG816464    AYA93248.1    KP843906    AKS40085.1    KX845562    ATB54993.1    PZC74337.1    JQ708200    AFQ02692.1    MF067296    ASM61894.1    KJ461920    AHW45922.1    KY701309    ASK86231.1    PCG68755.1    RSAL01000078    RVE48718.1    KPJ10838.1    HM046613    ADK55520.1    GAIX01009047    JAA83513.1    U94328    AAC36146.1    KM881570    AJQ22645.1    AF315317    AF315319    FJ602772    AAG30944.1    AAG30946.1    ACM24338.1    AGBW02011158    OWR47131.1    KR137569    ALI87024.1    KPJ00669.1    AGBW02008361    OWR53574.1    AGBW02012988    OWR44131.1    SOQ46844.1    KPJ00670.1    KC710018    KC710022    AGM90551.1    AGM90555.1    SOQ46845.1    KC710019    KC710024    AGM90552.1    AGM90557.1    RVE53491.1    FJ602780    ACM24346.1    AB195971    BAD74196.1    GDQN01008714    JAT82340.1    NWSH01001148    PCG72391.1    ODYU01008627    SOQ52368.1    HM046614    ADK55521.1    KC689795    KX845561    KZ150027    AGQ42773.1    ATB54992.1    PZC74791.1    HM359007    ADI48314.1    NWSH01000548    PCG75721.1    MH042022    AXJ21597.1    KQ459597    KPI95180.1    KQ460970    KPJ10176.1    KX977585    ATN45244.1    DQ063589    AAZ14790.1    OWR41397.1    GAIX01014246    JAA78314.1    KX958482    ASQ43198.1    AGBW02009356    OWR51030.1    HQ219476    ADX96001.1    KX958478    ASQ43194.1    KZ150133    PZC73025.1    ODYU01009326    SOQ53668.1    NWSH01000008    PCG80951.1    DQ063590    AAZ14791.1    KP843898    AKS40077.1    JTDY01000346    KOB77599.1    JTDY01002346    KOB71621.1    KU522479    APX61065.1    AB251897    BAF03557.1    PCG72390.1    BABH01042227    PZC74790.1    PCG75724.1    AB214974    BAE48744.1    KX958471    ASQ43187.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000037510    UP000053240    + More
UP000007151   

PRIDE

Q5R1P7    Q9GSB6    B9VTS8    Q9GN07    B9VTS0    Q5R1P6    + More
H9J540   

Pfam

PF00011   HSP20

Interpro

IPR002068   A-crystallin/Hsp20_dom        + More
IPR001436   Alpha-crystallin/HSP       
IPR008978   HSP20-like_chaperone       
IPR036116   FN3_sf       
IPR003961   FN3_dom       

SUPFAM

SSF49764   SSF49764        + More
SSF49265   SSF49265       

Gene 3D

2.60.40.790    

CDD

cd00063  FN3

ProteinModelPortal

Q5R1P7   Q1HAT5   A0A3S2PJT0   A0A161GJ22   Q0KKB1   A0A2H4LI82   + More
E2F3A1   A0A2H1X0S0   A0A2A4J3F8   A0A0A7RCH5   I4DMV4   A0A0A7RCE5   A0A194QB65   A0A0A7BZM3   A0A2D1CRQ9   A0A0L7K2K7   A0A0N0PBJ9   A0A222NUK8   A0A212FJB9   B2ZHW3   A0A0L7L9D3   R4HL93   A0A2W1BHM1   Q9GSB6   E2F399   A0A2H1W1Y8   A0A0K0XQX1   A0A0N1INR0   Q2LCS7   A0A2A4J9F7   A0A0A7RE39   A0A212EIS5   Q5MGN8   A0A0A7BZ70   A0A222NUL2   Q5MGL1   B9VTS8   Q1AMF5   A0A0A7BZF0   F1C928   A0A385PHG6   A0A0K0XQY0   A0A2H4LHL7   M1FKQ7   A0A343EU23   A0A0A7BZ27   A0A220W0C8   A0A2A4J9J4   A0A3S2L9M7   A0A0N1PFQ5   E2F397   S4P4G2   O18634   A0A0C5PKY8   Q9GN07   A0A212F0A4   A0A0P0CJ81   A0A194Q5N9   A0A212FIM4   A0A212ERQ7   A0A2H1W2W7   A0A194Q6N8   R9S0D1   A0A2H1W170   R9RZX9   B9VTS0   Q5R1P6   A0A1E1W5U5   A0A2A4JK93   A0A2H1WH29   E2F398   A0A075BR54   D9J2L8   A0A2A4JUN7   A0A345W859   A0A194PVM7   A0A0N0PBK3   A0A2D1CRP7   Q1AMF7   A0A212EIS8   S4NMP5   A0A222NUL9   A0A212FBC6   F1C929   A0A222NUM2   A0A2W1BH28   A0A2H1WKW0   A0A2A4K9P8   Q1AMF6   A0A0K0XR46   A0A0L7LQA9   A0A0L7L8L1   A0A2H4G808   Q0KKB2   A0A2A4JLW2   H9J540   A0A2W1BPZ5   A0A2A4JVR5   Q2WG64   A0A222NUK4  

PDB

3J07     E-value=6.66678e-24,     Score=269

KEGG

692533    K09542 crystallin, alpha B | (RefSeq) Hsp19.9; heat shock protein hsp 19.9

PATHWAY

04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)
04213    Longevity regulating pathway - multiple species - Bombyx mori (domestic silkworm)

GO

GO:0046872   GO:0005840   GO:0016021  

Length:

177

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00694

Exp number, first 60 AAs:

0.00694

Total prob of N-in:

0.01841

outside

1  -  177

 

 

Pi

200.066805

Theta

154.254096

Tajima's D

1.03145

CLR

0

CSRT

0.670816459177041

Interpretation

Uncertain