Gene

KWMTBOMO16000  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004608

Annotation

PREDICTED:_plastin-2_[Papilio_machaon]

Location

Bomo_Chr27(-):5723527-5775746      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.288

CDS

ATGGCAGACAATTCAAAATTGACCGACGAAGAATTAATAGAGATCCGGGAGCAATTCGCGCAGCTGGACACTAGCGGCAATGGCTACATCGACTTGAAGGAACTGAAGGATGCTCTAGATGGCGTAGGATATAAGATTCCACAATGGAAGGTACGGTGCATGATCGAGGAGTACTACGATAATGGAGGGAAGCACGGACGAGGTGTCAACGGAAGTTTGAACGGCGACGCCAGACGGAACGGCATGTCGCTTGTGGAGTTTGAGGATCTGTGCGCCAATCTTAAAGCACAACAGGTGTCGAGCACCTTCAAGCAGGCGGTCAGTAAAAAAGAGAATTTGGAACACCTGGGAGGCATGAGCGAAGCATCAAGCGATGGTACAACGCACTCTGTACGACTCGAAGAACAGATGGCGTTTTCTGGTTGGATCAACAGTAACTTAGAACACGATCCAGACCTCAAACATCTCTTGCCGATCGATCCCGAAGGCAAGCAGCTCTACGAAAAACTCAAAGACGGACTTATTCTATGCAAAGTAATAAATCACTCGTGCCCGGACACGATAGACGAGCGAGCGATCAACAAGAAGAACCTGACGTTATACACGAAACACGAGAACTTGACTCTGGCGCTGGTCTCCTCGCAGGCCATCGGGTGTAACATCGTCAACATCGACGCTCACGATCTTGCTAAAGGCAAACCTCATCTGGTGCTCGGTCTCCTGTGGCAGATCATCCGAATTGGTCTCTTCAACCAGATAACGCTGGAGCACTGCCCCGGACTCACGGAATTGCTGAATGACCAGGAACGCATCGAGGATCTGTTGGCTCTGTCCCCGGAGGCCATCCTGCTGCGCTGGGTCAACCACCAGCTGCAGTCCGCCGGCGTCACGCGGCGCTGCGCCAACTTCCAGCACGACGTGGCCGACTCCGAGATCTACTCCTACCTGCTGAAGCAGATCGCGCCCTCCGACGCCGGCGTCACGCTCGAGGCTCTCTCGGAGTCCGATCTGCACCGTCGCGCCGAGATAATGTTGCAACAAGCGGAGAAGCTGCGGTGCCGCGCGTTCGTGACGCCCGCCGACGTGGTGGCCGGCGTCTACAAACTCAACCTGGCGTTCGTGGCCAACCTCTTCAACCAGCACCCCGGCCTCCAGCGCACCGACGACGCAGAGGAGTACCACCAGCTCGACGAGACTAGGGAAGAGAAAACGTACCGTAACTGGATGAACTCGATGGGCGTGGCGCCGCACGTGAACTGGCTGTACTCCGACCTCACCGACGGACTCGTCATCTTCCAGCTGTACGACATCATCAAGCCGGGCATCGTCAATTGGAAGAAGGTTCACCGTCAGTTCTCGAAGCTGCGCAAGTTCATGGAGCGCCTGGAGAACTGCAACTACGCGGTGGAGCTCGGCCGCGCGCTCGGCTTCTCGCTCGTCGGCATCGCGGGCGCAGACATCAACGAGGGGAACGCCACGCTCACGCTGGCTCTGATCTGGCAACTGATGCGAGCGTACACGCTGTCGGTGCTGACCCGGCTGGCCAACACTGGCAACCCTATCATAGAGAAGGAAATCGTTCAGTGGGTCAATAATAAGCTGCAGAGCGCGGGCAAGCAGTCCTCCATTAGGAGCTTCCAGGATGAAGTACTGGCCGATGGGAAGGTCGTTATTGACTTGATCGATGCCATCAAACCGGGCTCCATCAACTACGACCTAGTGCTGCCCGGAGGCAACGAGGAGGAGAACTTGGCGAACGCTAAATACGCGATATCGATGGCTCGTCGCTGCGGCGGGCGCGTGTACGCGCTTCCCGAGGACATCACCGAACGGAAGCCCAAGATGATCATGACGGTGTTCGCCTGCCTCATGGCGCTGGACTACATACCCACCATGGACGCGCCCGTCAAGCCATCCAGTGATGATGCTGTAATTACCGAAACAGTAGAGACTACAGAGATGTACCAACTGGTGGAGGATTCGGGCTGGGGTATGCCGACTGCTGAGAAACCAGAGCCGCCTCCAAAGCCTGATAATTTATCGCCACTGCCTAGATCTAATTCTGAGGAGTCGATTAATTAG

Protein

MADNSKLTDEELIEIREQFAQLDTSGNGYIDLKELKDALDGVGYKIPQWKVRCMIEEYYDNGGKHGRGVNGSLNGDARRNGMSLVEFEDLCANLKAQQVSSTFKQAVSKKENLEHLGGMSEASSDGTTHSVRLEEQMAFSGWINSNLEHDPDLKHLLPIDPEGKQLYEKLKDGLILCKVINHSCPDTIDERAINKKNLTLYTKHENLTLALVSSQAIGCNIVNIDAHDLAKGKPHLVLGLLWQIIRIGLFNQITLEHCPGLTELLNDQERIEDLLALSPEAILLRWVNHQLQSAGVTRRCANFQHDVADSEIYSYLLKQIAPSDAGVTLEALSESDLHRRAEIMLQQAEKLRCRAFVTPADVVAGVYKLNLAFVANLFNQHPGLQRTDDAEEYHQLDETREEKTYRNWMNSMGVAPHVNWLYSDLTDGLVIFQLYDIIKPGIVNWKKVHRQFSKLRKFMERLENCNYAVELGRALGFSLVGIAGADINEGNATLTLALIWQLMRAYTLSVLTRLANTGNPIIEKEIVQWVNNKLQSAGKQSSIRSFQDEVLADGKVVIDLIDAIKPGSINYDLVLPGGNEEENLANAKYAISMARRCGGRVYALPEDITERKPKMIMTVFACLMALDYIPTMDAPVKPSSDDAVITETVETTEMYQLVEDSGWGMPTAEKPEPPPKPDNLSPLPRSNSEESIN

Uniprot

A0A1Q0AL85   H9J518   A0A0N0PBS6   A0A194Q6N4   A0A212FIR7   S4PII1   + More
A0A2W1BGZ6   A0A1L4A1S1   A0A2J7R6Z0   A0A084VER6   A0A2J7R6Y1   A0A2J7R6Y4   A0A2M4CX81   A0A2M4CWE2   A0A1Y9H214   A0A2M4CWH7   A0A1Q3FI98   A0A067QHD9   A0A1B6ECE8   A0A1Q3FIU9   A0A1Q3FIJ8   A0A2M4CWH6   A0A1Q3FHZ4   A0A1Q3FIV8   A0A1S4F211   A0A182XFH2   A0A1Q3FIS7   A0A1Q3FIE8   A0A1Q3FIJ0   A0A182M1F1   A0A1Q3FJ19   U5ETK6   A0A1Y1KSP8   Q17HT7   A0A088ALH6   A0A0A9Z8G6   V9IG68   A0A182VX41   Q7QH58   A0A182QX34   A0A182J3C6   A0A182JXA9   A0A1Y9H203   A0A182PNK2   A0A1B6E746   A0A182FQ82   A0A182UTQ8   A0A182I825   A0A1L8E566   A0A182YKJ9   A0A3L8DU45   A0A1I8JVH3   A0A182L7N2   A0A2M4BFH6   A0A182TTA2   W5JJI6   A0A2M4A1X1   F5HJ59   O61604   A0A0Q5T3M4   A0A2S2Q8P5   A0A069DWG1   A0A1W4VVN1   A0A2H8TT71   A0A0K8V0E1   A0A1L8E553   A0A0R1EBW1   W8B5I0   A0A0N7Z8Z1   A0A0N8NZW7   A0A224XK44   A0A0Q9XU37   A0A2M3Z5J2   A0A182R3P8   A0A2M3Z0C3   A0A139WPL5   A0A0L0BKX4   A0A2M3ZG29   A0A182SHY7   A0A1W4XR26   A0A034VRU9   A0A2M3Z0L2   A0A0K8TMW5   A0A0P4VZG8   J9K385   A0A0A1XRG8   A0A1Y1KPW9   A0A0Q9WBG1   A0A1L8EHQ0   A0A1L8EHD8   A0A1L8E5R3   T1PI29   A0A195BUV4   E0VKM2   A0A0M5J0Z4   A0A0J7KHP9   B0WA60   B4IF04   B3NWT8   Q8IQZ7  

Pubmed

19121390    26354079    22118469    23622113    28756777    24438588    + More
24845553    28004739    17510324    25401762    26823975    12364791    14747013    17210077    25244985    30249741    20966253    20920257    23761445    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17994087    26334808    17550304    24495485    27129103    18362917    19820115    26108605    25348373    26369729    25830018    25315136    20566863   

EMBL

KX893487    AQH32582.1    BABH01025850    KQ460891    KPJ10842.1    KQ459460    + More
KPJ00665.1    AGBW02008345    OWR53611.1    GAIX01005380    JAA87180.1    KZ150055    PZC74332.1    KU182487    API61862.1    NEVH01006740    PNF36599.1    ATLV01012288    KE524778    KFB36460.1    PNF36597.1    PNF36598.1    GGFL01005687    MBW69865.1    GGFL01005469    MBW69647.1    GGFL01005383    MBW69561.1    GFDL01007777    JAV27268.1    KK853412    KDR07772.1    GEDC01001683    JAS35615.1    GFDL01007494    JAV27551.1    GFDL01007742    JAV27303.1    GGFL01005441    MBW69619.1    GFDL01007868    JAV27177.1    GFDL01007484    JAV27561.1    GFDL01007620    JAV27425.1    GFDL01007716    JAV27329.1    GFDL01007666    JAV27379.1    AXCM01000652    GFDL01007476    JAV27569.1    GANO01001872    JAB57999.1    GEZM01077006    JAV63471.1    CH477245    EAT46255.1    GBHO01003413    GBRD01012165    GDHC01008424    JAG40191.1    JAG53659.1    JAQ10205.1    JR041765    AEY59506.1    AAAB01008817    EAA05335.4    EGK96320.1    AXCN02001190    GEDC01003563    JAS33735.1    APCN01002607    GFDF01000194    JAV13890.1    QOIP01000004    RLU23914.1    GGFJ01002664    MBW51805.1    ADMH02001253    ETN63458.1    GGFK01001420    MBW34741.1    EGK96319.1    AF053225    AE014298    AY069342    AAC06256.1    AAF48722.1    AAL39487.1    CH954180    KQS29987.1    GGMS01004881    MBY74084.1    GBGD01000857    JAC88032.1    GFXV01005639    MBW17444.1    GDHF01019922    JAI32392.1    GFDF01000217    JAV13867.1    CM000162    KRK06845.1    GAMC01012678    JAB93877.1    GDKW01002003    JAI54592.1    CH902625    KPU75476.1    GFTR01007454    JAW08972.1    CH933814    KRG07464.1    GGFM01003040    MBW23791.1    GGFM01001228    MBW21979.1    KQ971307    KYB29853.1    JRES01001705    KNC20721.1    GGFM01006657    MBW27408.1    GAKP01014402    JAC44550.1    GGFM01001309    MBW22060.1    GDAI01001901    JAI15702.1    GDRN01100478    JAI58566.1    ABLF02019010    GBXI01000802    JAD13490.1    GEZM01077008    JAV63469.1    CH940651    KRF82051.1    GFDG01000653    JAV18146.1    GFDG01000649    JAV18150.1    GFDF01000209    JAV13875.1    KA647790    AFP62419.1    KQ976405    KYM91860.1    DS235248    EEB13928.1    CP012528    ALC48706.1    LBMM01007163    KMQ89973.1    DS231869    EDS40889.1    CH480832    EDW46258.1    EDV46485.1    BT133379    AAN09439.1    AFH36364.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000235965    UP000030765    + More
UP000075884    UP000027135    UP000076407    UP000075883    UP000008820    UP000005203    UP000075920    UP000007062    UP000075886    UP000075880    UP000075881    UP000075885    UP000069272    UP000075903    UP000075840    UP000076408    UP000279307    UP000075882    UP000075902    UP000000673    UP000000803    UP000008711    UP000192221    UP000002282    UP000007801    UP000009192    UP000075900    UP000007266    UP000037069    UP000075901    UP000192223    UP000007819    UP000008792    UP000095301    UP000078540    UP000009046    UP000092553    UP000036403    UP000002320    UP000001292   

PRIDE

H9J518    O61604    Q8IQZ7   

Pfam

PF00307   CH        + More
PF13405   EF-hand_6
PF13499   EF-hand_7
PF13202   EF-hand_5
PF00036   EF-hand_1

Interpro

IPR039956   PLS2/3        + More
IPR018247   EF_Hand_1_Ca_BS       
IPR001715   CH-domain       
IPR036872   CH_dom_sf       
IPR002048   EF_hand_dom       
IPR039959   Fimbrin/Plastin       
IPR011992   EF-hand-dom_pair       
IPR001589   Actinin_actin-bd_CS       

SUPFAM

SSF47473   SSF47473        + More
SSF47576   SSF47576       

Gene 3D

1.10.418.10    

CDD

cd00014  CH
cd00051  EFh

ProteinModelPortal

A0A1Q0AL85   H9J518   A0A0N0PBS6   A0A194Q6N4   A0A212FIR7   S4PII1   + More
A0A2W1BGZ6   A0A1L4A1S1   A0A2J7R6Z0   A0A084VER6   A0A2J7R6Y1   A0A2J7R6Y4   A0A2M4CX81   A0A2M4CWE2   A0A1Y9H214   A0A2M4CWH7   A0A1Q3FI98   A0A067QHD9   A0A1B6ECE8   A0A1Q3FIU9   A0A1Q3FIJ8   A0A2M4CWH6   A0A1Q3FHZ4   A0A1Q3FIV8   A0A1S4F211   A0A182XFH2   A0A1Q3FIS7   A0A1Q3FIE8   A0A1Q3FIJ0   A0A182M1F1   A0A1Q3FJ19   U5ETK6   A0A1Y1KSP8   Q17HT7   A0A088ALH6   A0A0A9Z8G6   V9IG68   A0A182VX41   Q7QH58   A0A182QX34   A0A182J3C6   A0A182JXA9   A0A1Y9H203   A0A182PNK2   A0A1B6E746   A0A182FQ82   A0A182UTQ8   A0A182I825   A0A1L8E566   A0A182YKJ9   A0A3L8DU45   A0A1I8JVH3   A0A182L7N2   A0A2M4BFH6   A0A182TTA2   W5JJI6   A0A2M4A1X1   F5HJ59   O61604   A0A0Q5T3M4   A0A2S2Q8P5   A0A069DWG1   A0A1W4VVN1   A0A2H8TT71   A0A0K8V0E1   A0A1L8E553   A0A0R1EBW1   W8B5I0   A0A0N7Z8Z1   A0A0N8NZW7   A0A224XK44   A0A0Q9XU37   A0A2M3Z5J2   A0A182R3P8   A0A2M3Z0C3   A0A139WPL5   A0A0L0BKX4   A0A2M3ZG29   A0A182SHY7   A0A1W4XR26   A0A034VRU9   A0A2M3Z0L2   A0A0K8TMW5   A0A0P4VZG8   J9K385   A0A0A1XRG8   A0A1Y1KPW9   A0A0Q9WBG1   A0A1L8EHQ0   A0A1L8EHD8   A0A1L8E5R3   T1PI29   A0A195BUV4   E0VKM2   A0A0M5J0Z4   A0A0J7KHP9   B0WA60   B4IF04   B3NWT8   Q8IQZ7  

PDB

1RT8     E-value=1.56541e-113,     Score=1050

KEGG

101745417    K17336 plastin-3 | (RefSeq) plastin-2

GO

GO:0051017   GO:0051015   GO:0005509   GO:0005884   GO:0032432   GO:0051639   GO:0005737   GO:0003779   GO:0016321   GO:0005829   GO:0045179   GO:0016021   GO:0005515   GO:0006468   GO:0008270   GO:0016887   GO:0007166   GO:0016020   GO:0000287   GO:0006281   GO:0006259  

PANTHER

PTHR19961:SF32   PTHR19961  

Length:

693

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05382

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00138

outside

1  -  693

 

 

Pi

219.430448

Theta

17.899617

Tajima's D

0.560005

CLR

0.540781

CSRT

0.537823108844558

Interpretation

Uncertain