SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15998
Annotation
PREDICTED:_transmembrane_and_coiled-coil_domains_protein_2_isoform_X3_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.823
 

Sequence

CDS
ATGGATACGCTTCACGTTACCCACGCTCACAGTAAAGGGTCCAGCCGGAGCCAGTCGCCTTCCGCCGCGGACCTCGCCGTGGTTACCGATGACGCGGTCATCAGGTCAAGGGTACAATCTCCATCTACCGTACATCATGTTGTTAGTGAGCCGTCTTCAAGTTCATCGTCTCGTCACGGCGATAGAACGCATCACGCCAAGTCTCATTCACGAGATCTCGGTAACAGTCCTCTTACCGCCAACGCCACGGGAAATACATCTAGAGATTTAGAAGATTCGCCGCAGAAGAAGATTCTGTCAGGTCTGATGGCTCCAGGCGACTATGCCAGTACCGTATACAGCCCCAACGTATCGTACGCTCTCTCTTCGGACGAATACGGCTCGCCGGCCTACAGGAGTCAAGATGGTGATTACTCGACTCAAGATGAAGCAGATGGTACCAACGCTACATCGACTAAAGCGCAAGCGGCCATCGCTCATCTGAACAACAAGATTGAACGTACTAAAGAACTGATACGGCTCGAGCAGACCATCAGAGACGACAACGTAAACGAATACTTGAAGCTGGCGGCGAACGCGGACAAGCAGCAGCTCCAGCGGATCAAGGCAGTGTTCGAGAAGAAAAACCAGAAGAGCGCCCTCTGCATCGCGCAACTGCAGAAGAAACTCGAGGGCTACAACAAGAGGATCAAGAACTGGGAGCAACATGGCTCCAGCGGACAAGCTCACAGACAACCTCGAGAAGTTCTGCGAGACATGGGACAAGGTTTAAAAAACGTGGGCGGAAACATCCGCGACGGCATCACGGGTCTCGGCGGCAGCGTCATGGCCGCCCCGCGAGAGTTCGCTCATCTCTTCTCGAGGTCCAACCGGTTCGGATCCGCTGACAACATCGCTCAATTAGCCGGTTCGAGGGCTTCGGAAGTAGGCGAGGCGGCTGCCCCCCGAGGCTCAACGTTGCCGCGCGCCGCTACGTCACCAGCGCCCAAGTACTCGCCCGACGCCTCGCCCAGCTCATCCGTCACCAGCGAGGGAGCGCCGTAA
Protein
MDTLHVTHAHSKGSSRSQSPSAADLAVVTDDAVIRSRVQSPSTVHHVVSEPSSSSSSRHGDRTHHAKSHSRDLGNSPLTANATGNTSRDLEDSPQKKILSGLMAPGDYASTVYSPNVSYALSSDEYGSPAYRSQDGDYSTQDEADGTNATSTKAQAAIAHLNNKIERTKELIRLEQTIRDDNVNEYLKLAANADKQQLQRIKAVFEKKNQKSALCIAQLQKKLEGYNKRIKNWEQHGSSGQAHRQPREVLRDMGQGLKNVGGNIRDGITGLGGSVMAAPREFAHLFSRSNRFGSADNIAQLAGSRASEVGEAAAPRGSTLPRAATSPAPKYSPDASPSSSVTSEGAP

Summary

Pfam
PF10267   Tmemb_cc2
Interpro
IPR019394   TEX28/TMCC       

Ontologies

Topology

Length:
347
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00245
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02034
outside
1  -  347
 
 

Population Genetic Test Statistics

Pi
248.639938
Theta
188.757317
Tajima's D
0.915255
CLR
0.286553
CSRT
0.636018199090046
Interpretation
Uncertain
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