SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15986
Pre Gene Modal
BGIBMGA005728
Annotation
PREDICTED:_tyrosine-protein_phosphatase_CDC14_homolog_[Bombyx_mori]
Location
Bomo_Chr27(-):5158987-5192952      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.115
 

Sequence

CDS
ATGGATGAGAGTGATGTTATTGTATCGTCCACTGAAATTATAAAAGATAGATTGTATTTCGCAACGCTAAAAACGGGCTACAAACCGAAACCCACGCGGAACAGCAAATACTTCCACATCGAAGATGAGATCGTTTACGAGAACTTCTATTTCGACTTCGGCCCGTACCACCTGTGCCACCTGTACCAGTTCTGCAAGAAACTCAACGAGGAGTTGGACAGGAATCCGAAGAAGAAAATAGTTTACTATACGAGCAACAATGAGAATTTAAGGTTGAACGCAGCGTATCTTATTGGCAGCTATCAGGTAATATATCTAAAGTCAAGTCCGGCAGCTGTGTACAAGCAGCTGACCGACGGCTCGGAGTGGTCGCTGTTGAATTTCCGGGACGCGTCCGGAGGCCCGCCGCTGTTCGATATATCGCTGCTGGACGTCCTACAGGGCATCAAGGTGGCGCACGAAGCCGGCTTCTTCGACTTCGAGCACTTCGATGCCGAACAGTATTTGTTTTACGAGAAAGTTGAAAACGGCGATCTCAACTGGATCGTTCCGGGTAAGATGTTGGCGTTCTCCGGGCCGCACCACCGGTCTCGGCTTGACCGCGGCTACCCCCTGCACAGTCCCGAACATTATCACGACTACTTCCGTACTCATAATGTGACCACGATCGTCCGTCTGAACAAGAAGTCGTACGACGCCCGCCAGTTCACGTCGCACGGCTTCGAGCACAGGGAGCTGTTCTTCGTCGACGGCTCGGTGCCCTCGGACCTCATCGTGAACCGCTTCATTCGTATCGCGGAGGCTGCTAAGGGCGCGGTCGCGGTGCACTGTAAAGCCGGGCTGGGCCGCACGGGCACGCTCATCGCCTGCTACATGATGCGGCAGCACGGCTTCACGGCGCGCGAGGCCATCGCGTGGCTGCGCGTGTGCCGCCCGGGCTCCGTCATCGGACACCAGCAGTGGTTCCTCGAGAATATCCAGTCGCGGATGCACGCAGAAGGGGAAGCTTACCGTCGGCGGCACAACGTCACGGCGCCGCCCGTCTACACCCGGGGGATATACAGCGACCTGCCCCGCGACCAGACTGTGCTCGACAACCACAAACCAGTATCCCTCAACAGCATACTGCAGAACAACCGGGACGCTAACAAGTTGGACAACGGTAACATCATAAACACAACGGAAACCGATTCCGAGAACAACGTGACCACGGTCATCGGCAAATACAAGACCACACCGACGCCGATGTTGCCAGCGAAGAACGTCTTCGCGCCCAAACTCAACTACATGCTGCCGACGAACAACGTCCGCAACGCCAACAACACGAACCTGAAGCAGCCGACCAGGATGAACACGAACCTGAAGAGTTACGTGTCGAAGACGTCCACGTTCCCGCCGACCAGGAGCTCCAACCCGCAGGTCAAGCTCGCGTCTGCTGCCAAGCCGTTCGCGAGCAAGAACAGCTTCCACGGGCAGCGGGCCAACCTAGCGCGACCCGTCATGGCGTACGGACACGCCAGCAGCCCGCTCAAAACGTTCACCAGAAAAACGGGGAGCGTCGGCAAAATCACGAGCGACGCGACGTCGGGCAACACCGTCAGCAACGTGAACTCGACCCTATCCGCCTTGACGGAGAACTGCCATTTGAATGGCCAAAAACGTTTACCATCCGAGCCTAATCTGAAAAACGTCTCGCAAAATAAATCCATAACTAATAACATACCGAGGAAGAAGTTGATTATCCGCTCCAACTCTAGTTCAAGGAAGAAACTGCCCAAGGGCAATAATCTAAAAGGGTTGGAGCCAGCGCACGATTTGTCGTCCAGTGATACCAGCGTCACGAACATAGCGGCGGGTCCGCTCGACACGCCGTTCAGGTTTCGACGGAAAAGGGACAAATCCAACAGCCCCGAGCCGATGGACTGTCTCTCCAACTCTATTATAACTGCTGACGTCACGTCCGACAACGTCGAGGAGTCCAGCGACTCCCAAGGCAACAAGCTCTACAAAATAAAGGCGCTCCGGAAGAAATGCCCGGCTTTCGGAGTGAGCTTGCTCAAGAAAGACGGCATACAGACCAGGTCGAGCAGTTGTGCCAGTACTGCGGTTAAGAAAAAATGA
Protein
MDESDVIVSSTEIIKDRLYFATLKTGYKPKPTRNSKYFHIEDEIVYENFYFDFGPYHLCHLYQFCKKLNEELDRNPKKKIVYYTSNNENLRLNAAYLIGSYQVIYLKSSPAAVYKQLTDGSEWSLLNFRDASGGPPLFDISLLDVLQGIKVAHEAGFFDFEHFDAEQYLFYEKVENGDLNWIVPGKMLAFSGPHHRSRLDRGYPLHSPEHYHDYFRTHNVTTIVRLNKKSYDARQFTSHGFEHRELFFVDGSVPSDLIVNRFIRIAEAAKGAVAVHCKAGLGRTGTLIACYMMRQHGFTAREAIAWLRVCRPGSVIGHQQWFLENIQSRMHAEGEAYRRRHNVTAPPVYTRGIYSDLPRDQTVLDNHKPVSLNSILQNNRDANKLDNGNIINTTETDSENNVTTVIGKYKTTPTPMLPAKNVFAPKLNYMLPTNNVRNANNTNLKQPTRMNTNLKSYVSKTSTFPPTRSSNPQVKLASAAKPFASKNSFHGQRANLARPVMAYGHASSPLKTFTRKTGSVGKITSDATSGNTVSNVNSTLSALTENCHLNGQKRLPSEPNLKNVSQNKSITNNIPRKKLIIRSNSSSRKKLPKGNNLKGLEPAHDLSSSDTSVTNIAAGPLDTPFRFRRKRDKSNSPEPMDCLSNSIITADVTSDNVEESSDSQGNKLYKIKALRKKCPAFGVSLLKKDGIQTRSSSCASTAVKKK

Summary

Uniprot
A0A3S2P6D1   A0A194Q5L9   A0A0N1IGS7   A0A2H1VMA3   A0A212EIT6   A0A0L7LI81   + More
A0A218UD73   A0A2I0UIE1   A0A091EEZ9   H0Z3V6   F1P209   A0A091L2Q4  
Pubmed
26354079    22118469    26227816    20360741    15592404   
EMBL
RSAL01000012    RVE53501.1    KQ459460    KPJ00649.1    KQ459890    KPJ19553.1    + More
ODYU01003324    SOQ41926.1    AGBW02014566    OWR41399.1    JTDY01001021    KOB75110.1    MUZQ01000411    OWK51683.1    KZ505741    PKU45810.1    KK718445    KFO56528.1    ABQF01035301    AADN05000647    KK552363    KFP34164.1   
Proteomes
UP000283053    UP000053268    UP000053240    UP000007151    UP000037510    UP000197619    + More
UP000052976    UP000007754    UP000000539   
Pfam
PF00782   DSPc        + More
PF14671   DSPn
Interpro
IPR003595   Tyr_Pase_cat        + More
IPR026070   CDC14       
IPR020422   TYR_PHOSPHATASE_DUAL_dom       
IPR000387   TYR_PHOSPHATASE_dom       
IPR016130   Tyr_Pase_AS       
IPR029021   Prot-tyrosine_phosphatase-like       
IPR029260   DSPn       
IPR000340   Dual-sp_phosphatase_cat-dom       
IPR026068   Dual_Pase_CDC14A       
SUPFAM
SSF52799   SSF52799       
Gene 3D
3.90.190.10    
ProteinModelPortal
A0A3S2P6D1   A0A194Q5L9   A0A0N1IGS7   A0A2H1VMA3   A0A212EIT6   A0A0L7LI81   + More
A0A218UD73   A0A2I0UIE1   A0A091EEZ9   H0Z3V6   F1P209   A0A091L2Q4  
PDB
1OHD     E-value=5.47932e-99,     Score=924

Ontologies

KEGG
101740096    K06639 cell division cycle 14 [EC:3.1.3.16 3.1.3.48] | (RefSeq) tyrosine-protein phosphatase CDC14 h
GO
GO:0008138   GO:0004725   GO:0016604   GO:0005829   GO:0005813   GO:0007605   GO:1902636   GO:0072686   GO:0000226   GO:0032426   GO:0071850   GO:0032467   GO:0000278   GO:0005737   GO:0007096   GO:0004722   GO:0060271   GO:0000922   GO:0005730   GO:0006470   GO:0016311   GO:0016791   GO:0007166   GO:0016020   GO:0000287   GO:0006281   GO:0006259  
PANTHER
PTHR23339:SF27   PTHR23339:SF77  

Topology

Length:
706
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.05245
Exp number, first 60 AAs:
0.00033
Total prob of N-in:
0.00283
outside
1  -  706
 
 

Population Genetic Test Statistics

Pi
187.601029
Theta
153.434318
Tajima's D
0.667244
CLR
0.171822
CSRT
0.565171741412929
Interpretation
Uncertain
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