Gene

KWMTBOMO15983

Annotation

PREDICTED:_protein_lethal(2)essential_for_life-like_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr27(+):5083973-5084533      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.385

CDS

ATGCTACAATTAAGTAAACCATCAAACTTTGGGGACGAATTTGTACTTCGTTCTGTTGATTGGCTCGAGAACCTTCCATGGCACGACGGAAATATTGTGAAAACACAAAAAGACAGATTGGAGATCAATTTACTGGTTAAAGATTTTGCCGCTGAACAAATTCAGGTAAAGGTCGCCGATGATTTTATTGTGATTGAAGCGAAACACGAAGAAAAGAAAGACGAACAGGGATTCATATCTAGACACTTTGTGAGAAAATATAAGTTGCCTCAGGGAAGTCAGCCCAACAAAATCACATCAACGCTATCGGCTGATGGTGTGTTGAAAATAGTGGTGCCAAAAGAAACGGCTGTTTTGAAAGATACTGCGATACCTGTGGCATACGAGGACTCAAAGAAGCCAAATTCGAAATTATGA

Protein

MLQLSKPSNFGDEFVLRSVDWLENLPWHDGNIVKTQKDRLEINLLVKDFAAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGSQPNKITSTLSADGVLKIVVPKETAVLKDTAIPVAYEDSKKPNSKL

Similarity

Belongs to the small heat shock protein (HSP20) family.

Uniprot

A0A2H4G8P1   S4PFH3   A0A0L7LSA1   A0A212FJC2   A0A0N0PED4   A0A194QB46   + More
I3QQD3   A0A2H1WQE6   A0A2D1CRR3   A0A2A4JH73   A0A385PHG6   H9J540   U6BMM6   A0A1E1W5U5   Q2WG64   A0A0A7BZ70   A0A212ERQ7   A0A212F0A4   A0A3S2L9M7   A0A220W0C8   Q1AMF5   A0A222NUL2   A0A2H4LHL7   E2F399   A0A0N1PH36   A0A2H1WKW0   D6WHH1   F1C928   A0A0K0XR50   A0A2W1BH28   Q9GSB6   E2F397   A0A2A4K9P8   A0A2H1W1Y8   E3UKK8   B9VTS8   A0A2A4J9J4   A0A0A7BZF0   A0A0K0XQY0   A0A194Q5N9   A0A0K0XQX1   A0A0A7BZ27   A0A0C5PKY8   Q9GN07   F1C930   A0A194Q6X9   A0A0N1PFQ5   A0A084VQX9   A0A212FIM4   A0A0P0CJ81   R9S0D1   A0A2H1W2W7   S4P142   Q1HAT5   A0A0A7BZM3   A0A2W1BHM1   R9RZX9   Q2LCS7   A0A084VQX7   A0A084VQX8   A0A343EU23   A0A0A7RE39   A0A0N1INR0   A0A182GSM1   A0A023EJ46   Q0KKB1   E2F3A1   A0A182J5R7   A0A2A4J3F8   A0A2H1X0S0   A0A0K0XR51   A0A0L7L8L1   A0A182Q6Z7   Q16JG6   A0A222NUK4   A0A3Q3MJF8   A0A0A7RCE5   Q5R1P7   A0A212FBC6   A0A3S2PJT0   A0A0A7RCH5   R4HL93   A0A2H4G806   Q5R1P4   A0A023EJ33   A0A182G9B2   A0A182G9B4   A0A023EL90   A0A2M4ANC4   A0A182Y117   A0A182J2X5   A0A023ELL3   A0A194QKZ3  

Pubmed

23622113    26227816    22118469    26354079    22957810    19121390    + More
16703614    24947609    28687981    28755305    28756777    21510953    18362917    19820115    26196395    17031055    25527122    24438588    18804477    25514417    26483478    24945155    17630658    17510324    25244985   

EMBL

KU522477    APX61063.1    GAIX01004007    JAA88553.1    JTDY01000199    KOB78327.1    + More
AGBW02008280    OWR53835.1    OWR53836.1    KQ459890    KPJ19556.1    KQ459460    KPJ00646.1    JQ707904    AFK14098.1    ODYU01010279    SOQ55273.1    KX977581    ATN45240.1    NWSH01001391    PCG71425.1    MG816464    AYA93248.1    BABH01042227    KF471527    AHA36865.1    GDQN01008714    JAT82340.1    AB214974    BAE48744.1    KJ461913    AHW45915.1    AGBW02012988    OWR44131.1    AGBW02011158    OWR47131.1    RSAL01000078    RVE48718.1    KY701309    ASK86231.1    DQ063591    AAZ14792.1    KX958479    ASQ43195.1    KX845562    KZ150055    ATB54993.1    PZC74337.1    HM046615    ADK55522.1    KQ460141    KPJ17473.1    ODYU01009326    SOQ53668.1    KQ971321    EFA00665.1    HQ219475    ADX96000.1    KP843903    AKS40082.1    KZ150133    PZC73025.1    BABH01025846    AF315318    AAG30945.2    HM046613    ADK55520.1    NWSH01000008    PCG80951.1    ODYU01005718    SOQ46842.1    HM449882    ADO33017.1    FJ602788    ACM24354.1    NWSH01002265    PCG68755.1    KJ461916    AHW45918.1    KP843906    AKS40085.1    KPJ00669.1    KP843896    AKS40075.1    KJ461920    AHW45922.1    KM881570    AJQ22645.1    AF315317    AF315319    FJ602772    AAG30944.1    AAG30946.1    ACM24338.1    HQ219477    ADX96002.1    KPJ00755.1    KQ460891    KPJ10838.1    ATLV01015347    KE525007    KFB40373.1    AGBW02008361    OWR53574.1    KR137569    ALI87024.1    KC710018    KC710022    AGM90551.1    AGM90555.1    SOQ46844.1    GAIX01009066    JAA83494.1    JX491641    KC710020    AB244517    AGC23337.1    AGM90553.1    BAE94664.1    KJ461917    AHW45919.1    PZC74338.1    KC710019    KC710024    RSAL01000012    AGM90552.1    AGM90557.1    RVE53491.1    DQ336356    ABC68342.2    ATLV01015346    KFB40371.1    KFB40372.1    MF067296    ASM61894.1    KM217077    KM217078    AJA32865.1    KPJ10837.1    JXUM01084944    KQ563469    KXJ73789.1    GAPW01004647    JAC08951.1    AB251898    BAF03558.1    HM046617    ADK55524.1    AXCP01009179    NWSH01003339    PCG66520.1    PCG66521.1    ODYU01012514    SOQ58867.1    KP843904    AKS40083.1    JTDY01002346    KOB71621.1    AXCN02000983    CH478011    CH477680    EAT34406.1    EAT37335.1    KX958471    ASQ43187.1    KM217080    AJA32868.1    AB195970    BAD74195.1    AGBW02009356    OWR51030.1    RVE53492.1    KM217079    AJA32867.1    HQ647012    AET10424.1    KU522480    APX61066.1    AB195973    BAD74198.1    GAPW01004646    JAC08952.1    JXUM01049171    KQ561594    KXJ78061.1    JXUM01049173    KXJ78063.1    GAPW01004599    JAC08999.1    GGFK01008936    MBW42257.1    GAPW01004454    JAC09144.1    KQ458671    KPJ05575.1   

Proteomes

UP000037510    UP000007151    UP000053240    UP000053268    UP000218220    UP000005204    + More
UP000283053    UP000007266    UP000030765    UP000069940    UP000249989    UP000075880    UP000075886    UP000008820    UP000261640    UP000076408   

PRIDE

H9J540    Q9GSB6    B9VTS8    Q9GN07    Q5R1P7    Q5R1P4    + More

Pfam

PF00011   HSP20

Interpro

IPR002068   A-crystallin/Hsp20_dom        + More
IPR001436   Alpha-crystallin/HSP       
IPR008978   HSP20-like_chaperone       
IPR036116   FN3_sf       
IPR003961   FN3_dom       

SUPFAM

SSF49764   SSF49764        + More
SSF49265   SSF49265       

Gene 3D

2.60.40.790    

CDD

cd00063  FN3

ProteinModelPortal

A0A2H4G8P1   S4PFH3   A0A0L7LSA1   A0A212FJC2   A0A0N0PED4   A0A194QB46   + More
I3QQD3   A0A2H1WQE6   A0A2D1CRR3   A0A2A4JH73   A0A385PHG6   H9J540   U6BMM6   A0A1E1W5U5   Q2WG64   A0A0A7BZ70   A0A212ERQ7   A0A212F0A4   A0A3S2L9M7   A0A220W0C8   Q1AMF5   A0A222NUL2   A0A2H4LHL7   E2F399   A0A0N1PH36   A0A2H1WKW0   D6WHH1   F1C928   A0A0K0XR50   A0A2W1BH28   Q9GSB6   E2F397   A0A2A4K9P8   A0A2H1W1Y8   E3UKK8   B9VTS8   A0A2A4J9J4   A0A0A7BZF0   A0A0K0XQY0   A0A194Q5N9   A0A0K0XQX1   A0A0A7BZ27   A0A0C5PKY8   Q9GN07   F1C930   A0A194Q6X9   A0A0N1PFQ5   A0A084VQX9   A0A212FIM4   A0A0P0CJ81   R9S0D1   A0A2H1W2W7   S4P142   Q1HAT5   A0A0A7BZM3   A0A2W1BHM1   R9RZX9   Q2LCS7   A0A084VQX7   A0A084VQX8   A0A343EU23   A0A0A7RE39   A0A0N1INR0   A0A182GSM1   A0A023EJ46   Q0KKB1   E2F3A1   A0A182J5R7   A0A2A4J3F8   A0A2H1X0S0   A0A0K0XR51   A0A0L7L8L1   A0A182Q6Z7   Q16JG6   A0A222NUK4   A0A3Q3MJF8   A0A0A7RCE5   Q5R1P7   A0A212FBC6   A0A3S2PJT0   A0A0A7RCH5   R4HL93   A0A2H4G806   Q5R1P4   A0A023EJ33   A0A182G9B2   A0A182G9B4   A0A023EL90   A0A2M4ANC4   A0A182Y117   A0A182J2X5   A0A023ELL3   A0A194QKZ3  

PDB

3J07     E-value=3.6659e-20,     Score=235

KEGG

101738848    no KO assigned | (RefSeq) alpha-crystallin B chain pseudogene

GO

GO:0046872  

Length:

138

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.05909

outside

1  -  138

 

 

Pi

195.933501

Theta

172.893363

Tajima's D

0.40956

CLR

0

CSRT

0.485875706214689

Interpretation

Uncertain