SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15976
Annotation
PREDICTED:_peroxidase-like_isoform_X1_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 3.054
 

Sequence

CDS
ATGTATTATTTAGTTGGTGTGTCGGAGAGTTCGAACCTTGTGACCCGAACGAAGGCCGACGGGTTGATGGCTCCTGCAATAATCTCCAACACCCAACCAGAGGCGCCAGTCATACTCCATTCGTCAGAGTCCTACCAGCTGTTTACGATAAAGGTCATTCCAAAACACGTCATTACGGATCTTCCCGATCCATTAACAGTGCTTTTAGATTTTGAACCGAAAACGGCGAAATCCGGAAATGCTATGCCCACTCCAAGGTATTTAAGAACCAATCTGTGGAGTGTGGGCAAGGTTTCCAGCCAATTGTTTACTCAACTAGCGATTCATGATTTCGTTTTCATGTCTGCTGATGTAGTGTCTCTTCATGATACAGTAAAATATATTATATGGAAGCCATATTGCTGTACGGCCAAAGGAAAAACTGATAGAGATTGCGTACAGAATAAAATACCTGATGATGATCCGGTGCACCGCTTCTCAGACATCAGGTGTCTGAACATGACGCGACCGGAGTCTTTCCAATCCACTGGCTGTGTGAAAAATGGAACAGTTCCAGAAAGGGTATGTAATGGACACGAGATATACTCCTTACTCAACGAGATACACTGTCAGAAATAA
Protein
MYYLVGVSESSNLVTRTKADGLMAPAIISNTQPEAPVILHSSESYQLFTIKVIPKHVITDLPDPLTVLLDFEPKTAKSGNAMPTPRYLRTNLWSVGKVSSQLFTQLAIHDFVFMSADVVSLHDTVKYIIWKPYCCTAKGKTDRDCVQNKIPDDDPVHRFSDIRCLNMTRPESFQSTGCVKNGTVPERVCNGHEIYSLLNEIHCQK

Summary

Pfam
PF03098   An_peroxidase
Interpro
IPR037120   Haem_peroxidase_sf_animal        + More
IPR019791   Haem_peroxidase_animal       
IPR029585   Pxd-like       
IPR010255   Haem_peroxidase_sf       
SUPFAM
SSF48113   SSF48113       
Gene 3D
ProteinModelPortal

Ontologies

Topology

Length:
205
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02616
Exp number, first 60 AAs:
0.00108
Total prob of N-in:
0.04316
outside
1  -  205
 
 

Population Genetic Test Statistics

Pi
156.588262
Theta
20.736357
Tajima's D
0
CLR
126.146201
CSRT
0.376881155942203
Interpretation
Uncertain
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