Gene

KWMTBOMO15972

Pre Gene Modal

BGIBMGA010729

Annotation

PREDICTED:_uncharacterized_protein_LOC105663895_[Megachile_rotundata]

Location

Bomo_Chr27(-):4380493-4382101      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.612

CDS

ATGATTCGTGTGGAGGTAAATTTCAGAAACGAAAATTGGTCAGAAGTTTTGTGGAAACTGCAGCTCACCCTGAACGTTACGAAACAAAAGTCCACTCAATATTCACCTTTATATTTGTTAATTGGTAGCGATGCTGTGACGCCCGTCATTCGTTCCGTTGTACGCGATGTGGCTCTAGAAGGAACAAGTGCCAACAGAGAAACCTTACGCGAGCTTGCCCGACAAAGAGCTTCTCAACTGCTGGACAAAAACCGAAAACAGCAGGACACTCGAGTAAATGAACGGCGCAAACCCCCGCGTACTTTCCATGAAAACGACGTGGTCTTCGTGCATAAGAATAGCCAGTCTGTTGGAAAGCTGGATTCTGGTATGCGTGGCCCGTACAAAATAGTGCGTGCGCTGCCACATGGACGTTATGAACTGAAGCTTCTTTCTGGCTCACTTGGGAAGACCACGGAAGCTGCTGCAGAATTTATAAGTGCCTGGCACGGAGAGTGGACGCCGGATGTGTGCACCGCATTTTTCGAGTGTGATGAGAATAGCTCTGAGGAAGGTATTGTCGCCGGTCCATCACACCGCCATGACGACATAGTACCTCTAGACGGACCTATTAATGCGGGCGAGGACGCTCCGCCGTCAGGAGAGGCCGTGTTAGAAGATGATGATGACATTGGACGCGTGGCCTAA

Protein

MIRVEVNFRNENWSEVLWKLQLTLNVTKQKSTQYSPLYLLIGSDAVTPVIRSVVRDVALEGTSANRETLRELARQRASQLLDKNRKQQDTRVNERRKPPRTFHENDVVFVHKNSQSVGKLDSGMRGPYKIVRALPHGRYELKLLSGSLGKTTEAAAEFISAWHGEWTPDVCTAFFECDENSSEEGIVAGPSHRHDDIVPLDGPINAGEDAPPSGEAVLEDDDDIGRVA

Uniprot

A0A194R3M4   A0A3S2PH68   A0A0A9X1Z8   A0A146M2J2   W8APB2   A0A0J7NF11   + More
A0A0J7KLK4   A0A1Y1LBL8   A0A2A4JMN7   A0A162QSQ3   A0A1Y1NKQ3   A0A2D7MNY1   A0A2D7MUC4   A0A0P6HGX0   A0A182H0Z9   A0A2A4J7U9   A0A0C9QX60   A0A1G4M4G7   A0A131XQ77   A0A034VDD5   L7LV95   L7ML53   A0A182G9K0   A0A034WKE0   A0A034VKV9   A0A1R1PJ63  

Pubmed

26354079    25401762    26823975    24495485    28004739    26483478    + More
25348373    25576852   

EMBL

KQ460855    KPJ11840.1    RSAL01000035    RVE51343.1    GBHO01030786    JAG12818.1    + More
GDHC01004980    JAQ13649.1    GAMC01020207    JAB86348.1    LBMM01005919    KMQ91095.1    KMQ91096.1    GEZM01063860    JAV68946.1    NWSH01001093    PCG72660.1    LRGB01000295    KZS19922.1    GEZM01004879    JAV96287.1    NZIP01000006    MAJ36369.1    NZIP01000057    MAJ38290.1    GDIQ01042946    JAN51791.1    JXUM01259513    KQ644494    KXJ62352.1    NWSH01002797    PCG67520.1    GBYB01008369    JAG78136.1    FLMD02000219    SCV66471.1    GEFM01006999    JAP68797.1    GAKP01019384    JAC39568.1    GACK01009043    JAA55991.1    GACK01000334    JAA64700.1    JXUM01049447    KQ561604    KXJ78025.1    GAKP01004347    JAC54605.1    GAKP01016235    JAC42717.1    LSSK01001748    LSSK01001018    OMH78870.1    OMH80988.1   

Proteomes

UP000053240    UP000283053    UP000036403    UP000218220    UP000076858    UP000226717    + More
UP000069940    UP000249989   

Pfam

PF17921   Integrase_H2C2        + More
PF00665   rve
PF00078   RVT_1
PF00077   RVP
PF17919   RT_RNaseH_2
PF00098   zf-CCHC
PF02037   SAP
PF17917   RT_RNaseH
PF03732   Retrotrans_gag
PF00385   Chromo
PF12384   Peptidase_A2B

Interpro

IPR036397   RNaseH_sf        + More
IPR041588   Integrase_H2C2       
IPR012337   RNaseH-like_sf       
IPR001584   Integrase_cat-core       
IPR001878   Znf_CCHC       
IPR001969   Aspartic_peptidase_AS       
IPR001995   Peptidase_A2_cat       
IPR041577   RT_RNaseH_2       
IPR000477   RT_dom       
IPR018061   Retropepsins       
IPR021109   Peptidase_aspartic_dom_sf       
IPR036875   Znf_CCHC_sf       
IPR003034   SAP_dom       
IPR041373   RT_RNaseH       
IPR036361   SAP_dom_sf       
IPR005162   Retrotrans_gag_dom       
IPR000953   Chromo/chromo_shadow_dom       
IPR016197   Chromo-like_dom_sf       
IPR023780   Chromo_domain       
IPR024650   Peptidase_A2B       

SUPFAM

SSF53098   SSF53098        + More
SSF50630   SSF50630       
SSF57756   SSF57756       
SSF68906   SSF68906       
SSF54160   SSF54160       

Gene 3D

3.30.420.10     2.40.70.10     1.10.720.30    

CDD

cd00024  CHROMO

ProteinModelPortal

A0A194R3M4   A0A3S2PH68   A0A0A9X1Z8   A0A146M2J2   W8APB2   A0A0J7NF11   + More
A0A0J7KLK4   A0A1Y1LBL8   A0A2A4JMN7   A0A162QSQ3   A0A1Y1NKQ3   A0A2D7MNY1   A0A2D7MUC4   A0A0P6HGX0   A0A182H0Z9   A0A2A4J7U9   A0A0C9QX60   A0A1G4M4G7   A0A131XQ77   A0A034VDD5   L7LV95   L7ML53   A0A182G9K0   A0A034WKE0   A0A034VKV9   A0A1R1PJ63  

KEGG

101738461    no KO assigned | (RefSeq) uncharacterized LOC101738461

GO

GO:0003676   GO:0015074   GO:0004190   GO:0008270  

Length:

228

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06444

Exp number, first 60 AAs:

0.06444

Total prob of N-in:

0.14007

outside

1  -  228

 

 

Pi

123.993062

Theta

142.796532

Tajima's D

-0.413833

CLR

127.836471

CSRT

0.262986850657467

Interpretation

Uncertain