Gene

KWMTBOMO15966  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005723

Annotation

hypothetical_protein_ZHAS_00006196_[Anopheles_sinensis]

Location

Bomo_Chr27(+):4214533-4217011      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.385 Nuclear   Reliability : 1.239

CDS

ATGACATACGTGGCCGATATATTTTTGGCACAATCCTGGCGCGATCCCCGACTGCGCTTACCAGAGAACATGCACGAAGAGTACAGAATCCTGGACGTAGACTGGCTGAACAGCATCTGGCGTCCGGACTGCTTCTTTAAGAACGCAAAGAAAGTCACTTTCCATGAAATGAGCATACCGAATCATTATCTCTGGCTGTACCACGACAAGACTCTTCTTTATATGTCCAAATTGACATTGGTGCTTTCGTGTGCTATGAAATTTGAATCGTATCCTCACGACACCCAGAGCTGTTCCATAATGATAGAGAGCTGTGAGTATATCTGA

Protein

MTYVADIFLAQSWRDPRLRLPENMHEEYRILDVDWLNSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQSCSIMIESCEYI

Similarity

Belongs to the ligand-gated ion channel (TC 1.A.9) family.

Uniprot

A0A182XY07   A0A182N0W4   A0A084VLN8   Q0IGC1   A0A182WTN1   A0A182RCI3   + More
A0A182SHD0   A0A182JAN8   A0A182U867   A0A182IAF1   F5HJP4   A0A182KS63   A0A182LY34   A0A2A4JP73   A0A182PN45   W5JPG8   A0A182VKB2   A0A182FJ12   A0A1B0DGB8   A0A2H1W5V6   A0A182W5B0   B0XDT5   A0A3S2PJT8   A0A0N1IQ08   A0A3G9DMN8   A0A0N1IEF9   Q95T69   A0A034W8Z9   A0A034WAL8   H9J881   A0A1Q3EUP5   A0A310SEG0   A0A1B0CM64   A0A1A9WRY3   A0A1I8M7V0   A0A1B6EN59   A0A0C9QKA2   A0A1B0G9J2   A0A1A9UNE5   A0A1B6DKK2   A0A1I8NS14   B3M1G5   B4NIH8   A0A0A1XPF1   A0A1W4W1I0   B4GMH0   A0A3B0K2G3   B4HHX1   A0A0R1E8K5   A0A0P9A011   A0A0L0CLY6   B3P4F2   A0A1W4WDG6   Q294Z2   B5SUY9   Q9VGI0   B4PTF9   B4JSX1   E1JII9   Q8WS32   W8C0U9   A0A1B0BKL8   B4M4W1   B4KE13   A0A0K8V3F7   A0A1A9Y6E8   A0A1B6KKM0   A0A1B6LI61   A0A0C9RN68   A0A0R3NNT3   D3UAF1   A0A336MDT1   A0A0C9S226   A0A026WNJ8   E2A862   Q0GQR1   F4X7P9   A0A0M4F5D8   A0A154PLZ5   A0A2S2NNB6   A0A3L8DWG3   A0A1B0A8M5   A0A1B1QGD8   A0A1W4WKB6   A0A0L7RBB9   A0A1W4WKL3   A0A1J1J2L9   A0A0J7L6J1   A0A087ZTP8   A0A2S2NHX7   A0A1B6E7N4   J9K562   A0A2P8YR57   D6W801   A8DMU8   A0A0M8ZW46   A0A2J7R413   A0A0P6G9Z4   A0A195EUU5   A0A0P5CJE1  

Pubmed

25244985    24438588    17510324    12364791    20966253    20920257    + More
23761445    26354079    10731132    12537568    12537572    12537573    12537574    11753412    16110336    17569856    17569867    26109357    26109356    25348373    19121390    25315136    17994087    25830018    17550304    26108605    15632085    11714703    24495485    20087392    24508170    20798317    16902773    21719571    30249741    29403074    18362917    19820115    17880682   

EMBL

ATLV01014533    KE524974    KFB38882.1    CH477260    EAT45718.1    APCN01001220    + More
AAAB01008846    EGK96505.1    AXCM01000943    NWSH01000851    PCG73847.1    ADMH02000736    ETN65208.1    AJVK01059488    ODYU01006534    SOQ48470.1    DS232781    EDS45612.1    RSAL01000012    RVE53511.1    KQ459933    KPJ19279.1    LC373509    BBD14179.1    KQ458565    KPJ05811.1    AY060303    AF435471    AE014297    AAL25342.1    AAL74415.1    AAS65139.1    GAKP01007778    JAC51174.1    GAKP01007777    JAC51175.1    BABH01038193    BABH01038194    GFDL01016033    JAV19012.1    KQ778189    OAD52008.1    AJWK01018258    GECZ01030408    JAS39361.1    GBYB01003994    JAG73761.1    CCAG010015406    GEDC01011075    JAS26223.1    CH902617    EDV43256.1    CH964272    EDW84801.1    GBXI01001844    JAD12448.1    CH479185    EDW38044.1    OUUW01000014    SPP88424.1    CH480815    EDW42553.1    CM000160    KRK03898.1    KPU80154.1    JRES01000211    KNC33252.1    CH954181    EDV49467.1    CM000070    EAL28820.1    EU308114    ACA13298.1    AF382401    AAF54699.2    AAL66186.1    EDW97658.1    CH916373    EDV94861.1    ACZ94888.1    AY049775    AF382402    AF435470    AAL12211.1    AAL66187.1    AAL74414.1    AAN13530.2    GAMC01007259    JAB99296.1    JXJN01015975    CH940652    EDW59672.1    CH933806    EDW16034.1    GDHF01018933    JAI33381.1    GEBQ01027986    GEBQ01019979    JAT11991.1    JAT19998.1    GEBQ01016600    GEBQ01005649    JAT23377.1    JAT34328.1    GBYB01014927    JAG84694.1    KRT01103.1    FJ851090    ACZ51422.1    UFQT01000750    SSX26953.1    GBYB01014926    JAG84693.1    KK107144    EZA57612.1    GL437497    EFN70374.1    DQ667188    ABG75740.1    GL888873    EGI57522.1    CP012526    ALC47062.1    KQ434977    KZC12901.1    GGMR01006071    MBY18690.1    QOIP01000003    RLU24840.1    KU532294    ANT80569.1    KQ414617    KOC68217.1    CVRI01000067    CRL06685.1    LBMM01000538    KMQ98109.1    GGMR01004184    MBY16803.1    GEDC01003372    JAS33926.1    ABLF02012898    ABLF02012900    ABLF02012903    ABLF02012906    ABLF02066860    PYGN01000418    PSN46723.1    KQ971307    EFA11563.2    EF545125    ABU63603.1    KYB29824.1    KQ435851    KOX70813.1    NEVH01007816    PNF35566.1    GDIQ01039109    JAN55628.1    KQ981965    KYN31667.1    GDIP01173416    JAJ49986.1   

Proteomes

UP000076408    UP000075884    UP000030765    UP000008820    UP000076407    UP000075900    + More
UP000075901    UP000075880    UP000075902    UP000075840    UP000007062    UP000075882    UP000075883    UP000218220    UP000075885    UP000000673    UP000075903    UP000069272    UP000092462    UP000075920    UP000002320    UP000283053    UP000053240    UP000053268    UP000000803    UP000005204    UP000092461    UP000091820    UP000095301    UP000092444    UP000078200    UP000095300    UP000007801    UP000007798    UP000192221    UP000008744    UP000268350    UP000001292    UP000002282    UP000037069    UP000008711    UP000001819    UP000001070    UP000092460    UP000008792    UP000009192    UP000092443    UP000053097    UP000000311    UP000007755    UP000092553    UP000076502    UP000279307    UP000092445    UP000192223    UP000053825    UP000183832    UP000036403    UP000005203    UP000007819    UP000245037    UP000007266    UP000053105    UP000235965    UP000078541   

PRIDE

Q95T69    H9J881    Q9VGI0    E1JII9    Q8WS32   

Pfam

PF02931   Neur_chan_LBD        + More
PF02932   Neur_chan_memb

Interpro

IPR036734   Neur_chan_lig-bd_sf        + More
IPR006201   Neur_channel       
IPR006202   Neur_chan_lig-bd       
IPR018000   Neurotransmitter_ion_chnl_CS       
IPR036719   Neuro-gated_channel_TM_sf       
IPR006029   Neurotrans-gated_channel_TM       
IPR006028   GABAA/Glycine_rcpt       
IPR017877   Myb-like_dom       

SUPFAM

SSF63712   SSF63712        + More
SSF90112   SSF90112       

Gene 3D

2.70.170.10    

ProteinModelPortal

A0A182XY07   A0A182N0W4   A0A084VLN8   Q0IGC1   A0A182WTN1   A0A182RCI3   + More
A0A182SHD0   A0A182JAN8   A0A182U867   A0A182IAF1   F5HJP4   A0A182KS63   A0A182LY34   A0A2A4JP73   A0A182PN45   W5JPG8   A0A182VKB2   A0A182FJ12   A0A1B0DGB8   A0A2H1W5V6   A0A182W5B0   B0XDT5   A0A3S2PJT8   A0A0N1IQ08   A0A3G9DMN8   A0A0N1IEF9   Q95T69   A0A034W8Z9   A0A034WAL8   H9J881   A0A1Q3EUP5   A0A310SEG0   A0A1B0CM64   A0A1A9WRY3   A0A1I8M7V0   A0A1B6EN59   A0A0C9QKA2   A0A1B0G9J2   A0A1A9UNE5   A0A1B6DKK2   A0A1I8NS14   B3M1G5   B4NIH8   A0A0A1XPF1   A0A1W4W1I0   B4GMH0   A0A3B0K2G3   B4HHX1   A0A0R1E8K5   A0A0P9A011   A0A0L0CLY6   B3P4F2   A0A1W4WDG6   Q294Z2   B5SUY9   Q9VGI0   B4PTF9   B4JSX1   E1JII9   Q8WS32   W8C0U9   A0A1B0BKL8   B4M4W1   B4KE13   A0A0K8V3F7   A0A1A9Y6E8   A0A1B6KKM0   A0A1B6LI61   A0A0C9RN68   A0A0R3NNT3   D3UAF1   A0A336MDT1   A0A0C9S226   A0A026WNJ8   E2A862   Q0GQR1   F4X7P9   A0A0M4F5D8   A0A154PLZ5   A0A2S2NNB6   A0A3L8DWG3   A0A1B0A8M5   A0A1B1QGD8   A0A1W4WKB6   A0A0L7RBB9   A0A1W4WKL3   A0A1J1J2L9   A0A0J7L6J1   A0A087ZTP8   A0A2S2NHX7   A0A1B6E7N4   J9K562   A0A2P8YR57   D6W801   A8DMU8   A0A0M8ZW46   A0A2J7R413   A0A0P6G9Z4   A0A195EUU5   A0A0P5CJE1  

PDB

5VDI     E-value=1.90334e-18,     Score=220

KEGG

101743028    K05397 histamine-gated chloride channel | (RefSeq) uncharacterized LOC101743028

GO

GO:0004888   GO:0016021   GO:0005230   GO:0007165   GO:0042391   GO:1902476   GO:0034220   GO:0007268   GO:0050877   GO:0005254   GO:0005887   GO:0045202   GO:0043005   GO:0005886   GO:0006811   GO:0006821   GO:0019183   GO:0019182   GO:0043052   GO:0006810   GO:0016020   GO:0005783   GO:0006816   GO:0000287   GO:0006281   GO:0006259   GO:0005216  

PANTHER

PTHR18945  

Length:

108

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05361

Exp number, first 60 AAs:

0.0006

Total prob of N-in:

0.14703

outside

1  -  108

 

 

Pi

281.524173

Theta

134.23329

Tajima's D

3.458057

CLR

0.673259

CSRT

0.993550322483876

Interpretation

Uncertain