Gene

KWMTBOMO15961  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005717

Annotation

PREDICTED:_dihydropyrimidinase_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr27(-):4051868-4096032      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.83

CDS

ATGACCGTTGACGCCACAGCGACATCTGTGTCCGGTGTTAATATCAAAAGCTCTCAAAACCGGCTTCTGATCAAGAATGGCAGGATCGTTAACGACGATGGTATCGAGGAGGCTGACGTCTACATTGAAGACGGCATCATCAAGCAAGTTGGCCGCAACCTCATCATTCCTGGAGGCACACGGACCATCGATGCCGCTGGCAAACTGGTCATGCCCGGGGGCATCGACCCCCACACTCACTTCGAGCTGGAAATGATGGGCGCTAAAACTGCCGATGACTTCTACAAGGGCACCCGGGCTGCGGTCGCTGGAGGGACAACAACCATAATTGACTTCGTTCTACCTGAAAAGGGGCAGTCGCTTCTAGAGGCCTATGCGAATTGGCGGGAAAAAGCCGATAATAAGGTGTGCTGCGACTACGGTCTCCACGTAGGAGTGACCTGGTGGTCGCCGGCCGTGCAGAAGGAGATGAAACAGCTGGTCTCCGAGCAGTACGGCGTGAACTCCTTCAAGATGTTCATGGCGTACCGGAACACCTGGATGCTCGACGACTACGACCTGTACTGCGCCATCGAGACCTGTGCTGAACTCAAAGCCCTGCCCCAAGTCCACGCAGAGAACGGCCACATCATAGCTCGCAACACCGAGAAGCTCCTCGCGGCCGGAGTGACCAGGCCCGAGGGTCATCAGCTCTCCAGAGACGAGGAAGTCGAAAGCGAGGCCGTGAACAGGGCATGCGTCATCGCCAATCAGGCAAACAGCCCCCTGTATATCGTGCACATGATGTCGAAGAGCGCAGTCCGAGCTCTCCAACTGGCCCGCAACAAACAGAAACAGCCTGTATACGGGGAAACTCTGGCCGCCACTGTCGGTACCGATGGTACTCACTACCGGAACTCCTGTTTCCGTCACGCGGCCGCTCACGTGCTCTCTCCTCCACTGAGACCTGACCCGTCCACTCCTCAAGCCATGGTGGAAGCGCTGGCCGATGACCACTTACAGCTGATCGGCAGCGACAACTGCACGTTCCACGAGAAAGACAAGGAAATCGGCAAAGGGAACTTCTCCAAGATTCCGAATGGCGTTAATGGAGTCGAAGACCGCATGACCATATTGTGGCAGAAGGGAGTCAACACTGGAATAATGGACCCGTGCCGGTTCGTGGCGGTGACCAGCTCCAGCGCCGCTAAGATCTTCAACCTGTGGCCGCAGAAGGGGCGCGTGGCGGTCAACAGCGACGCCGACATCGTCGTCTGGGATCCGCGCCTCGAGAAGACCATAACCGCCGCCAGCCACAAGCAGGCGGTCGACTTCAACATCTTCGAGGGTCAGCACGTGGTCGGCGGGCCGCAGTACGTCATCGTGAACGGCAGGGTGTGCCTGGACGACGGCGAACTCAGAGTCGTTGAAGGTCTAGGCAAGTTCCTGAAGACCCCAATAAACAGTCCGTACGTTTACGGGGAGCAGAATCTATCGCACGGCGACCACGACCTGCTCGAGCCGCTAAGCCGGGATTCCCCCGATAGGGTCAACGGTTCCTCCGTGCCAACCGACCTGGCCCTCGTGAACAAGCATCTCGAAGGTCTGAGCGTGACGTCATCCGGCTGTAGCACCCCGACCGGACGGAAAATGAGGGACCCCATGCAGAGGGACTTGCAAAACTCCACCTTCTCTATCAGCAAAGAGACTGAAGGACTCGACACCAAGACTTCGGTTCGCGTCCGCAACCCGCCGGGCGGCAAGTCCTCCGGGCTCTGGTAG

Protein

MTVDATATSVSGVNIKSSQNRLLIKNGRIVNDDGIEEADVYIEDGIIKQVGRNLIIPGGTRTIDAAGKLVMPGGIDPHTHFELEMMGAKTADDFYKGTRAAVAGGTTTIIDFVLPEKGQSLLEAYANWREKADNKVCCDYGLHVGVTWWSPAVQKEMKQLVSEQYGVNSFKMFMAYRNTWMLDDYDLYCAIETCAELKALPQVHAENGHIIARNTEKLLAAGVTRPEGHQLSRDEEVESEAVNRACVIANQANSPLYIVHMMSKSAVRALQLARNKQKQPVYGETLAATVGTDGTHYRNSCFRHAAAHVLSPPLRPDPSTPQAMVEALADDHLQLIGSDNCTFHEKDKEIGKGNFSKIPNGVNGVEDRMTILWQKGVNTGIMDPCRFVAVTSSSAAKIFNLWPQKGRVAVNSDADIVVWDPRLEKTITAASHKQAVDFNIFEGQHVVGGPQYVIVNGRVCLDDGELRVVEGLGKFLKTPINSPYVYGEQNLSHGDHDLLEPLSRDSPDRVNGSSVPTDLALVNKHLEGLSVTSSGCSTPTGRKMRDPMQRDLQNSTFSISKETEGLDTKTSVRVRNPPGGKSSGLW

Uniprot

A0A3S2P022   A0A2H1W4V5   A0A0N0PE68   A0A194Q221   A0A2A4KAT6   A0A212FBK2   + More
A0A1S4FHC5   A0A023EVC9   A0A1Y1JWL0   A0A1Q3FZ81   U5ERH4   A0A1L8DY05   A0A1L8DXV1   A0A0P6GVF2   A0A0P6DZ65   A0A0P5E6K1   A0A0P5T0U9   A0A0P5VLS1   A0A026VXA1   E9HEG7   A0A0P6AA33   A0A0P5VU65   A0A3F2YSP3   A0A2M4CIC6   A0A0P5TAY5   A0A158N946   A0A0P6BI46   W5JG30   A0A0P5K9R4   A0A151IQ59   A0A0P5T3M7   A0A0P5ALC3   A0A0P5YQZ7   A0A0P5A115   A0A1B6DMF4   A0A0K8W795   A0A034WEF9   A0A0K8VS20   A0A1B6LJK0   A0A0N8ABD8   A0A0P5ZK81   A0A034WIJ3   A0A0P5D6G8   A0A0P5FGC6   A0A1I8NWP1   A0A0P5UYD8   K7J5X3   A0A0N8CGY8   A0A0N8CHE4   A0A0P4ZJ43   A0A0P5BLY7   J9JRJ8   A0A0P5K0T4   A0A0P5V4Z7   A0A336KUI5   A0A0C9RYA2   A0A0N8CYM0   A0A0T6AUZ7   D6W7R7   B4KU98   A0A2J7RMY9   A0A2H8U0N4   A0A0P5NJJ5   A0A1Y1K493   A0A1Q3G4S4   J9EA44   A0A1B6IG16   A0A1B6F4W7   Q171I1   B4LKF4   A0A1S4FH89   A0A0P5UQE7   A0A336M9S2   A0A1B6DF52   K1PGY5   V4AUM4   A0A0P5FYR3   V9IGU4   A0A3R7M0S1   B4NFK4   A0A0P5KNS2   A0A0P4XMH6   B4J537   A0A1I8MJV5   A0A1I8MBF6   A0A0P5T385   T1PGN2   A0A0P4WCD9   A0A1Q3G4L9   A0A182XVL4   A0A0P4WL42   A0A0M3QV77   A0A210PIS8   B3N1T5   A0A1W4UY79   A0A0P5KM06   A0A1S3D1S6   Q8IPQ2   A0A1Y1K2S8  

Pubmed

26354079    22118469    24945155    28004739    24508170    21292972    + More
21347285    20920257    23761445    25348373    20075255    18362917    19820115    17994087    17510324    22992520    23254933    25315136    25244985    28812685    10731132    12537568    12537572    12537573    12537574    12626710    16110336    17569856    17569867    26109357    26109356   

EMBL

RSAL01000012    RVE53514.1    ODYU01006314    SOQ48053.1    KQ459933    KPJ19275.1    + More
KQ459590    KPI97455.1    NWSH01000003    PCG81024.1    AGBW02009300    OWR51124.1    GAPW01000657    JAC12941.1    GEZM01098876    JAV53692.1    GFDL01002198    JAV32847.1    GANO01002806    JAB57065.1    GFDF01002795    JAV11289.1    GFDF01002794    JAV11290.1    GDIQ01028206    JAN66531.1    GDIQ01070105    JAN24632.1    GDIP01147389    JAJ76013.1    GDIP01137186    JAL66528.1    GDIP01099585    JAM04130.1    KK107638    EZA48392.1    GL732629    EFX69844.1    GDIP01045266    LRGB01003271    JAM58449.1    KZS03445.1    GDIP01109796    JAL93918.1    APCN01002114    GGFL01000723    MBW64901.1    GDIP01132742    JAL70972.1    ADTU01009076    ADTU01009077    ADTU01009078    ADTU01009079    GDIP01014374    JAM89341.1    ADMH02001318    ETN63026.1    GDIQ01187406    JAK64319.1    KQ976785    KYN08291.1    GDIP01131496    JAL72218.1    GDIP01211077    JAJ12325.1    GDIP01056008    JAM47707.1    GDIP01209869    JAJ13533.1    GEDC01010460    JAS26838.1    GDHF01027016    GDHF01018802    GDHF01017488    GDHF01005390    GDHF01004659    JAI25298.1    JAI33512.1    JAI34826.1    JAI46924.1    JAI47655.1    GAKP01004991    GAKP01004989    JAC53961.1    GDHF01010623    GDHF01006962    JAI41691.1    JAI45352.1    GEBQ01016149    JAT23828.1    GDIP01164033    JAJ59369.1    GDIP01056009    JAM47706.1    GAKP01004992    JAC53960.1    GDIP01164786    JAJ58616.1    GDIQ01254930    JAJ96794.1    GDIP01109797    JAL93917.1    GDIP01132743    JAL70971.1    GDIP01131495    JAL72219.1    GDIP01212077    JAJ11325.1    GDIP01186725    JAJ36677.1    ABLF02034884    ABLF02034890    ABLF02034903    GDIQ01191456    JAK60269.1    GDIP01104947    JAL98767.1    UFQS01000940    UFQT01000940    SSX07882.1    SSX28116.1    GBYB01012926    JAG82693.1    GDIP01086087    JAM17628.1    LJIG01022826    KRT78519.1    KQ971307    EFA11336.2    CH933808    EDW09694.1    NEVH01002547    PNF42198.1    GFXV01007945    MBW19750.1    GDIQ01145376    JAL06350.1    GEZM01098879    JAV53687.1    GFDL01000276    JAV34769.1    CH477454    EJY57696.1    GECU01021853    JAS85853.1    GECZ01024542    JAS45227.1    EAT40651.1    CH940648    EDW60675.1    GDIP01109800    JAL93914.1    UFQS01000755    UFQT01000755    SSX06649.1    SSX26995.1    GEDC01013028    JAS24270.1    JH817585    EKC20858.1    KB201305    ESO97476.1    GDIQ01253839    JAJ97885.1    JR047070    AEY60318.1    QCYY01002657    ROT68566.1    CH964251    EDW83071.2    GDIQ01188854    JAK62871.1    GDIP01240482    JAI82919.1    CH916367    EDW00663.1    GDIP01133993    JAL69721.1    KA647300    AFP61929.1    GDRN01081560    JAI61994.1    GFDL01000295    JAV34750.1    GDRN01081563    JAI61993.1    CP012524    ALC41903.1    NEDP02076628    OWF36385.1    CH902661    EDV34054.2    GDIQ01187407    JAK64318.1    AE014297    AF465756    GU452674    GU452675    AAN13245.2    AAO33382.1    ADD13532.1    GEZM01098880    JAV53686.1   

Proteomes

UP000283053    UP000053240    UP000053268    UP000218220    UP000007151    UP000053097    + More
UP000000305    UP000076858    UP000075840    UP000005205    UP000000673    UP000078542    UP000095300    UP000002358    UP000007819    UP000007266    UP000009192    UP000235965    UP000008820    UP000008792    UP000005408    UP000030746    UP000283509    UP000007798    UP000001070    UP000095301    UP000076408    UP000092553    UP000242188    UP000007801    UP000192221    UP000079169    UP000000803   

PRIDE

Q8IPQ2   

Pfam

PF01979   Amidohydro_1        + More
PF00462   Glutaredoxin

Interpro

IPR032466   Metal_Hydrolase        + More
IPR011778   Hydantoinase/dihydroPyrase       
IPR006680   Amidohydro-rel       
IPR011059   Metal-dep_hydrolase_composite       
IPR007110   Ig-like_dom       
IPR002109   Glutaredoxin       
IPR014025   Glutaredoxin_subgr       
IPR011899   Glutaredoxin_euk/vir       
IPR036249   Thioredoxin-like_sf       

SUPFAM

SSF51338   SSF51338        + More
SSF51556   SSF51556       
SSF52833   SSF52833       

Gene 3D

2.30.40.10    

CDD

cd01314  D-HYD

ProteinModelPortal

A0A3S2P022   A0A2H1W4V5   A0A0N0PE68   A0A194Q221   A0A2A4KAT6   A0A212FBK2   + More
A0A1S4FHC5   A0A023EVC9   A0A1Y1JWL0   A0A1Q3FZ81   U5ERH4   A0A1L8DY05   A0A1L8DXV1   A0A0P6GVF2   A0A0P6DZ65   A0A0P5E6K1   A0A0P5T0U9   A0A0P5VLS1   A0A026VXA1   E9HEG7   A0A0P6AA33   A0A0P5VU65   A0A3F2YSP3   A0A2M4CIC6   A0A0P5TAY5   A0A158N946   A0A0P6BI46   W5JG30   A0A0P5K9R4   A0A151IQ59   A0A0P5T3M7   A0A0P5ALC3   A0A0P5YQZ7   A0A0P5A115   A0A1B6DMF4   A0A0K8W795   A0A034WEF9   A0A0K8VS20   A0A1B6LJK0   A0A0N8ABD8   A0A0P5ZK81   A0A034WIJ3   A0A0P5D6G8   A0A0P5FGC6   A0A1I8NWP1   A0A0P5UYD8   K7J5X3   A0A0N8CGY8   A0A0N8CHE4   A0A0P4ZJ43   A0A0P5BLY7   J9JRJ8   A0A0P5K0T4   A0A0P5V4Z7   A0A336KUI5   A0A0C9RYA2   A0A0N8CYM0   A0A0T6AUZ7   D6W7R7   B4KU98   A0A2J7RMY9   A0A2H8U0N4   A0A0P5NJJ5   A0A1Y1K493   A0A1Q3G4S4   J9EA44   A0A1B6IG16   A0A1B6F4W7   Q171I1   B4LKF4   A0A1S4FH89   A0A0P5UQE7   A0A336M9S2   A0A1B6DF52   K1PGY5   V4AUM4   A0A0P5FYR3   V9IGU4   A0A3R7M0S1   B4NFK4   A0A0P5KNS2   A0A0P4XMH6   B4J537   A0A1I8MJV5   A0A1I8MBF6   A0A0P5T385   T1PGN2   A0A0P4WCD9   A0A1Q3G4L9   A0A182XVL4   A0A0P4WL42   A0A0M3QV77   A0A210PIS8   B3N1T5   A0A1W4UY79   A0A0P5KM06   A0A1S3D1S6   Q8IPQ2   A0A1Y1K2S8  

PDB

2VR2     E-value=1.07786e-151,     Score=1378

KEGG

101742594    K01464 dihydropyrimidinase [EC:3.5.2.2] | (RefSeq) dihydropyrimidinase

PATHWAY

00240    Pyrimidine metabolism - Bombyx mori (domestic silkworm)
00410    beta-Alanine metabolism - Bombyx mori (domestic silkworm)
00770    Pantothenate and CoA biosynthesis - Bombyx mori (domestic silkworm)
00983    Drug metabolism - other enzymes - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016810   GO:0005737   GO:0006208   GO:0004157   GO:0005829   GO:0016021   GO:0045454   GO:0009055   GO:0015035   GO:0051642   GO:0007265   GO:0006207   GO:0007613   GO:0016787   GO:0006811   GO:0005220   GO:0005783   GO:0006816   GO:0000287   GO:0006281   GO:0006259  

Length:

586

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0343900000000002

Exp number, first 60 AAs:

0.00029

Total prob of N-in:

0.00363

outside

1  -  586

 

 

Pi

280.270725

Theta

165.105749

Tajima's D

2.632036

CLR

0.250794

CSRT

0.95705214739263

Interpretation

Uncertain