SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15955
Pre Gene Modal
BGIBMGA013376
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743303_[Bombyx_mori]
Location
Bomo_Chr27(-):3706489-3718240      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.69
 

Sequence

CDS
ATGAAGCTAGAACTAGTCGATTTTAATTCTGATGGAACAATCGAATCATCGAGAATCAAAAGGGAAGGAGGCCCAGAAAACAGGGACTTGACAGTACTCCTTGTGAATCAGAAGAGAAACGAATACAATACGAAGGTCGGAAGGTATCACAGCGTCAAACCTCTCATCGGCTTGTTGACGTCGACAGCGAGGACTTTCATCCAGGACGGTGTCACCACGGAATATGCGACCCAAATCCTCGGCACCACCTTGGACAATGGGCGCATATACGCACAGCTCCTCACCAAGTCTTCTTTAGTGTTGTACAATAAGCCTTCTGCTGTCGATGAGCCTGTCATTGTCAATCCGACGCGTATACATTCCGCTTTCGATGGACAATGGAACGTCAAGCAAGATTTAGGCTTCATAGACCCCGAGAATTTCGTATTAAAAAATACAGATTACTTGGCGCCTAATAGTATGATGGAAATCGTCTATGCCAGTAAACCAGTTCAAGATGTTAATTACTGGAGTCCGTCAGCTCCTGAAAGCCAAACTGAAAACCAACTCGATGAGCCGGTGGCACGCAGAGTGCAACCAGTTAAAGAGATTCCGCGTTATGTTCAGAATGACGCCTTAAACTATCTTGACGGTCCAGTCATCGAAAGCGAGAAGAAATTCGAATTTTTCGTTGAACCTACCCAAATAGCTTACAATAACCCGGTCTATAGACAAAGTAAGGCTTACGAACATATAGCCGAACCTGTCAAACCAGTTATACGCAATGAACCTTTGCCAGAGGAGCTTAATATTAGTAAAGTTAAACCTAATTACGATTTACCGACATTTACGATTAAAAACGAATTCTCTCCGATATTTTATTATATAGATAATGTTGAAACGCGCAAGCAATTTCAACCAGCAGTCCAACAGACTAAAACGCCTAAGAAGTTATTTGGACAAAAAAGCGAACCTAGACCTAAGAAAACTTTCACGTATGCCGGATTTGCCGATTTTACGACGGTCGTTGGAGATACTGTTATTATATTTACGCCAAACACAGAAACAAGTCAACCACAGCACCCTGGGGAAGTTAATGTTTTTCCATCGGCTAAACCAGTTCAAAAGTTAGGTTCTAAGATAACTTTCCTTGCCTCTGATATTCCTGTAGCAAGTTCCACATATAAAGCACACGAAGATATCTCTCCAACTAAAATAATAACGTCAATTTCTAGTGAAGATAATAATAGATCCGAGAAAGCCCTTTACAATGACGAAGAGAGCCTTAAAAAAGTCCTGTATCAAGTTGATGATGTTATTCCAGATACAATGAGTGTTCAGTTTGATCATAATTTTGGTCTTAATGTGGACGTTATTCAACCATCAGAAGTTTCTGTATCTACAACAGAAAGCACACGCTTAACTGACTTTTTGGGTGTTATACCGATCCAAGATTTTAGTTCCAAGCCGACGGATCCTTTGAGCTCCGTTTCTCCGACACCAATGGTAGTGGAATCTTCTCAAGAAACCGTGGTCACAGAACCAAATATTGTTGATGTTTTTACAAATTCCGAAGAAGAGAGTGAGAACACAGCTGCTGAAGTAAGTGAGACCGCAGAAGAAGACCAAGAAGATGAGGAAGAAAACGAGACAACAACGGAGGCATCACAAGCGTTATTTACTACAACAGAAAGTGGGCATAGTGATGAATCGTCAGAAGATTTTGAAACTACCACTGAAGCGAAGGTATTCGTAACGGAACCTGAACAAAATAACGATGAACAGGGCACTGAGGATGATGAGGATGATGAAAATGATAGCAACGAAAACATTGAAACCTATAATGAAGAACACGAAACACACGAAGACGTGTTTTGCACTAATGGTTTAGAAACACAATCTACAATGACTACTGCTTACAAGACACTTACATATCTGACAACTTATTTTATTACATTAGAAAACACTGAAACAACAACCTCTGTTAAATCGAATGTAGTTGTAGAAAGTAACATTGGCTACTTTACAAATGTTGTGTGTCGAACTAACTTTGAGATCGAACCAACTGCAGTTGTTTCTATTGATGTAAATTATTCTGTACATTCCAATTTGGAAACCCCAGAAACGCAATCAGAAGAACCAACAACTAAAACAAGTATAGAGATTGAACCTAGCACTGAAGACTATAAAATAACAGTAGCTAAGCAAGAAATCGAAATTGCACCTCAAGGTGGAACAGTAAATGAAGAAAATAGAACATCATCTGATGAAAGTAGCGCTGAGGCAAACAATGAAGGGAATGAAGAGAAACAGCCGACTACATCGACAACCACCACCAGTACAACTACTACTACTACAGAAAGAGGGAACGAGAACAATGAAAGAGAAACTACCAGTGAAAATCATACTGAGGAAACGGAAAGAGTCGGACAAGGTGTCGTTACAACGACTGAATCACTGCTCGATGAAGATAAGGTGGATGATGAAGAAAATGAGATCGATGTCATATATAAAACACTTTACACTACTTACACATACTTTACGACGTTCTTCGGAGACGAATCATCAAGTGTAGCCAGTCATAAATCAGTGGTTACAAATATTATTACATCTACGATTGATTTGAACAAGTTAGACCCTTCGCTATTAGGTGCTTTTGATGAAGGAGAAATAGCACCAACTAGTGTCGGTGTAGGGCGTCCGACTGAATCAGTGGCCATTAACAGTATAATTGATTTGGTGAAAAACAAAGACGTTATTGAATCTGTTGAAGTTGATGAAGTATACAGTTCCCAGACGCCAACTCCATCTTTAGGTGACGATGTTGTTGCAAGTATCAAGCCAGATGCCGTAAAAACATATTTCACAACTTATACATTCTTCACAACTATATTTGTTGGTACTGATGCAAATGTCTGCAGTAGAAGCGAAGTATACACAAACTATGTAGGACCTGATGCACTAGTACCAACAAAGAGTAACCCGCTCGCAGCAGAAAGTACAAGAGCTCAATTTGACTTTAGGAATTGTAGGCAAGTCAAAATGGACCCCCCCTCAAATCCTGAAGACAACTCGTCTATGGAAAAGACTATCAGTGTTGAACAGATGGAGCAAACTCATAGCGAAACCAAGAAAGAATTAATTCAACCTAATCCTCTTGAAGTTGACATGTTGTTTAGTGTAGAGGCTAAACCCTTAGAATCTGACAATTCAAATTATGTAACAGACGTCAAGTCCTCATCATCTAAAGGAGAAAGGCAATATTTAGATAATAACAATGTATTGGATGATCAAATAAGTTCAGAGAGTAACATCGATGAAATTTTGCCATCCCCTACCCTTTTGCTACAGACTAGCTACACAACATTTACGTACTTTACGACAATGTATATTGGTAAAGATTCTAGTAAAGTGAAAAGTCACTTAGAAACTATCACCAACGTTGTCACGGAAACTATTATGCCGAATAAAGAACCAGAAGAGGAAAGTAATTTACCTATTACTTATTATACTACCTTTACTTATTGGACTACACTGTACAAGGATAAATCAACGACCATCACGAGTCGTGAAGAAATTGTTTCGAATGTCGTCACTCCAACAGTTCAAGTATTACCAACTGTCAGTCCAATTGACACAACCCCCATTGAAGTAGACAGTGTTCTACCACCAAAAGATCTGGAAGTCGAGATAAAACCATCTTTAATAGATGATAGCTCAGAACCGGATGACGGTAAAGCAACGTTCTATACAACATATACTTATTTCACCACATTTTACGCTGGAAACACTTCGCAAATAAGAAGTAGCTTAGAAACAGTGACAAACATTGTGGACAATACAAAGGTCGCTGAAGACAATCAAATAGGGCGCAAAGTTCCGGCTGGTGCTCCAGAAAATAATTTGATTCAAGACAAGGGTGAAAAGGTACTTATTGCACCTACTTTGGTCAAGGAAGTTATTCAGCCGACCAAACTACCGGATATCTCATCAGCGTCACCTACAGTACTTTTAGGTACATACATTGATAACCTATTTGCTGAAGTAAAACCAGACGTACCAACAACTGAAAGCGAAAAGAAAATTTTGTTTTCACAAGTGGCAGTTATTTCAGGCGATTCGACAATCGTGACAAGCGATAACAAAACATTTAATACGGAGAGTACTACATCATCAACTACCACTACCACAACCACAACCACAACCACAGAAAACAATAATATAAGCTCATCCACAGAAATTTTAGAGGGTTCAGTTACAACAGAATCTGAATCATCTACAGAATCTAAGTACGAAGATGAGGATGATGGCACAAATAGTAGGAAAAAGTCACGTCTTACTTTTAAACCTAAGAAACCGTCAATTACTCCAGTCATAACGCCATTCTCATCAAGAAATAGGCCCACATTTATTCCAAAACGTGTACCTCTACCCAGTAGTGCTACCACGATAACTCGTTTAGATGCAACGCCTACCATTACTGCCACACCAACATTGAAATCTGTTAGGCAGTCCGGTTTCCCAGGTAGCAGAAAGCAGTCCGCATCGCCTGGAGCATCTAGTGCCGGCAAACGTTTTCCTGGGCGTAGCAGTGTCAACAATCCATCGGCTAATGCCCCATCTGCGTCACGAGGTGGATTTGGAAGAAGTTCCATTTCACCTACATCTCGACGAACTGGTTTTAGAACTAGTTCTCTGAGAAGTGGTAGCCTAGATTACGCTAGTAGATCAGCTGTTCCAAGAATTATTAGGCCTACAGCTTCGTTAAGGCTACCTGCTGCAAGAAACAGTAAACAACCAACTGCATTAACCATCCCACCCACTGATCAAAACGAGGAGACTTTTGGAACTCAGTTTGAAGAAGCTGCTACGGAACCTTATGAAGAAGTCACTGAACAACCGATTAGAACGACCAATAATCCTTTGCTAAGGTTCAGAAGACCTCCAATTTTAAGACAACCAGGAACAGCCATCACTCCACGTACGACTACACCATCTAATAGACGAGGAATAACATCTAGAAGTCGAATCACAACAACAACTAGAAGATCAACAACTCGTAGTACACCTAATCCTTTACTGGCATTGAGGAGACAAAGGCCAAATGCACTCTTTCCACGAAGAAATCTTTTCAGACAGCCAGAACCAGAACCAGAAGAAGAAATCAAAGAAGATGAACAAAAAGTAGAAGAAGATGAAGAATTATTAGAAGAAGAAGAAGAGTTTGAAGAAGATAATGATTACGACTCATCCGACAGAAAAGAGAGACAAGTCGCTACACCACCCACATCAAAACCCATAGTACAAATCAGACCTTTCGCATTTAGGCGTCGTACCAAGCGTCAAGTTAATACTGCGAACCGTCGGTACACAAACTTTAGACGACCAGGACTAAAAGGTACATCCACTAAGCGACCCGAACCAGAACCTGAAACGCAAGCTCCATCTACACAAAAACCTAGACCAGGTTCACGATTTAATAAAGGAACAACGTCACGTAATAAAGCAACAACGTCATCCAGTGTAAAAGCTGCATCTAGACAGCCTTTCATTATTCGTGGAGAAAGTAGAACTACATCGACCGCTGCTACACCATCATATAGAAGAGCAAAGACCCGGACTTCATCTAGAACAACTACATCGGCTTCTAGACCGAAACTACCAAGACTATCTGCCAAGACCTCAACTTCTAGGTCAAGTCCGTCCAGGGCAACGACCAGGGCTCGTACCCGCACAACCACGAGTAGAGTATCAAGCAGACAAAGAAGCTCATTTGAAAATTTGAGTGGCGAGAGATTCAACAATTTTAACAACATTCTTAATGACGGAAAGATTACTATTACTTATCAAATACCAACAGAGGTCACTATTCCTTTTGTAAACGGCAAAATAACGGAATACAAGAATGTTTTGTCAGCTACCCCTAGCATTGAGACTTTATTACTAAATCAAGTTTCGACATCTATAGGGCCATTAGGTCAGCAGCAATTAGTACTTGCCGCGGAATCTACCGAACTAGCAGAAAACGGCGCTACAAAACTAATTAAATATCTACTTCACGAAACCCCGACAACTACAGTGATTTTCACACCCACAACTATAAGGGGCCGTAAGACTTCGTTCTCTCACATTTTACCTAGCACAGTATACAATGTCGAATCCGTAACTCAGACTGTGGCTCCAGAAATTAATACAAACGTTCCCTTGGCCAATTTGCTTCTATCACAACTTTTGCTTGGCAACCAACAACCTGCGATCAACCCTCTCCTAGCATTCCAAGGACAGGGATTGTTACCGCAGCAACCTATAGTACAAACTCCTGTAACGGAATATAAGACTAGAGCCACCACTTACGTCACCACAATTACTGATGCTAGAGAAACAGTTTTGCCAATTACATTCAGAGGCAAGGCAATTTTGACTACAATTGTAGATCCCACGACAAACGTTATAACCGCTACTGAATTCGTTACGGAAACTGTGATTACGACTCCCACTGCTTTGGGTCCATCTCCGCAGTTGAATTCGTTGCTTCTTCCCCTCTTACTTCAGCAACAGCAACAGCAACAGCAGAGCCTTTCGCTTCCTACAGTAAATCCCTTAGCAGGATTGGGCCAATCAGATCTTAATCTAAACAATTTAAATGCCCTTCAAAACAATTTTAATAATGACATATACAGTAACAGCCCCAAACCTAACATCCTATCAGATCTGAATAGCAACGAAAACTTCTCTGATGATTACGAAATAGATAGCGATGATGATTCCCCTCCACCGCCGCCTCCTTCCCGGTCAAGAAGCAAGCAAAAAGCGCCTAAGCCCGCACCTCCACCCAAGCAAACCAGTGTTGTCACTTTATACGTATCTGGTAAGCATCCAGGTGAATTCAGTACAGTTCTATCAACGGTCATCAGTGATGACACACAGACGGTTAGGAAACGCGAAGCCATTTATTATGAGGACGCCGTAGTCTCTCCATCCATTTTACCAACAATAGACGAGCTGTATGGTTCACAGTTGGATAGTAGCGCAACAATCTTACTTTCAGACAGAGATAGATTCTTAGATGACTCCTCATTTGAGAACCAGATTGAAACCCAAAGCCTGGAGAGTATTGTAGGTGAAATCAGTAAGCATATAAAATATAACGCGTCACCAACGTACGTCGTAGACTTAGGCAGTCCTTCTTCAATCAGGCATATGAAAGAAGGAACTTCGGTCGATGATATTTCGTGA
Protein
MKLELVDFNSDGTIESSRIKREGGPENRDLTVLLVNQKRNEYNTKVGRYHSVKPLIGLLTSTARTFIQDGVTTEYATQILGTTLDNGRIYAQLLTKSSLVLYNKPSAVDEPVIVNPTRIHSAFDGQWNVKQDLGFIDPENFVLKNTDYLAPNSMMEIVYASKPVQDVNYWSPSAPESQTENQLDEPVARRVQPVKEIPRYVQNDALNYLDGPVIESEKKFEFFVEPTQIAYNNPVYRQSKAYEHIAEPVKPVIRNEPLPEELNISKVKPNYDLPTFTIKNEFSPIFYYIDNVETRKQFQPAVQQTKTPKKLFGQKSEPRPKKTFTYAGFADFTTVVGDTVIIFTPNTETSQPQHPGEVNVFPSAKPVQKLGSKITFLASDIPVASSTYKAHEDISPTKIITSISSEDNNRSEKALYNDEESLKKVLYQVDDVIPDTMSVQFDHNFGLNVDVIQPSEVSVSTTESTRLTDFLGVIPIQDFSSKPTDPLSSVSPTPMVVESSQETVVTEPNIVDVFTNSEEESENTAAEVSETAEEDQEDEEENETTTEASQALFTTTESGHSDESSEDFETTTEAKVFVTEPEQNNDEQGTEDDEDDENDSNENIETYNEEHETHEDVFCTNGLETQSTMTTAYKTLTYLTTYFITLENTETTTSVKSNVVVESNIGYFTNVVCRTNFEIEPTAVVSIDVNYSVHSNLETPETQSEEPTTKTSIEIEPSTEDYKITVAKQEIEIAPQGGTVNEENRTSSDESSAEANNEGNEEKQPTTSTTTTSTTTTTTERGNENNERETTSENHTEETERVGQGVVTTTESLLDEDKVDDEENEIDVIYKTLYTTYTYFTTFFGDESSSVASHKSVVTNIITSTIDLNKLDPSLLGAFDEGEIAPTSVGVGRPTESVAINSIIDLVKNKDVIESVEVDEVYSSQTPTPSLGDDVVASIKPDAVKTYFTTYTFFTTIFVGTDANVCSRSEVYTNYVGPDALVPTKSNPLAAESTRAQFDFRNCRQVKMDPPSNPEDNSSMEKTISVEQMEQTHSETKKELIQPNPLEVDMLFSVEAKPLESDNSNYVTDVKSSSSKGERQYLDNNNVLDDQISSESNIDEILPSPTLLLQTSYTTFTYFTTMYIGKDSSKVKSHLETITNVVTETIMPNKEPEEESNLPITYYTTFTYWTTLYKDKSTTITSREEIVSNVVTPTVQVLPTVSPIDTTPIEVDSVLPPKDLEVEIKPSLIDDSSEPDDGKATFYTTYTYFTTFYAGNTSQIRSSLETVTNIVDNTKVAEDNQIGRKVPAGAPENNLIQDKGEKVLIAPTLVKEVIQPTKLPDISSASPTVLLGTYIDNLFAEVKPDVPTTESEKKILFSQVAVISGDSTIVTSDNKTFNTESTTSSTTTTTTTTTTTENNNISSSTEILEGSVTTESESSTESKYEDEDDGTNSRKKSRLTFKPKKPSITPVITPFSSRNRPTFIPKRVPLPSSATTITRLDATPTITATPTLKSVRQSGFPGSRKQSASPGASSAGKRFPGRSSVNNPSANAPSASRGGFGRSSISPTSRRTGFRTSSLRSGSLDYASRSAVPRIIRPTASLRLPAARNSKQPTALTIPPTDQNEETFGTQFEEAATEPYEEVTEQPIRTTNNPLLRFRRPPILRQPGTAITPRTTTPSNRRGITSRSRITTTTRRSTTRSTPNPLLALRRQRPNALFPRRNLFRQPEPEPEEEIKEDEQKVEEDEELLEEEEEFEEDNDYDSSDRKERQVATPPTSKPIVQIRPFAFRRRTKRQVNTANRRYTNFRRPGLKGTSTKRPEPEPETQAPSTQKPRPGSRFNKGTTSRNKATTSSSVKAASRQPFIIRGESRTTSTAATPSYRRAKTRTSSRTTTSASRPKLPRLSAKTSTSRSSPSRATTRARTRTTTSRVSSRQRSSFENLSGERFNNFNNILNDGKITITYQIPTEVTIPFVNGKITEYKNVLSATPSIETLLLNQVSTSIGPLGQQQLVLAAESTELAENGATKLIKYLLHETPTTTVIFTPTTIRGRKTSFSHILPSTVYNVESVTQTVAPEINTNVPLANLLLSQLLLGNQQPAINPLLAFQGQGLLPQQPIVQTPVTEYKTRATTYVTTITDARETVLPITFRGKAILTTIVDPTTNVITATEFVTETVITTPTALGPSPQLNSLLLPLLLQQQQQQQQSLSLPTVNPLAGLGQSDLNLNNLNALQNNFNNDIYSNSPKPNILSDLNSNENFSDDYEIDSDDDSPPPPPPSRSRSKQKAPKPAPPPKQTSVVTLYVSGKHPGEFSTVLSTVISDDTQTVRKREAIYYEDAVVSPSILPTIDELYGSQLDSSATILLSDRDRFLDDSSFENQIETQSLESIVGEISKHIKYNASPTYVVDLGSPSSIRHMKEGTSVDDIS

Summary

Uniprot
H9JV13  
Pubmed
19121390   
EMBL
BABH01026488    BABH01026489   
Proteomes
UP000005204   
PRIDE
H9JV13   
Pfam
PF07645   EGF_CA        + More
PF15950   DUF4758
Interpro
IPR000152   EGF-type_Asp/Asn_hydroxyl_site        + More
IPR000742   EGF-like_dom       
IPR018097   EGF_Ca-bd_CS       
IPR013032   EGF-like_CS       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR031866   DUF4758       
IPR036364   SEA_dom_sf       
IPR001881   EGF-like_Ca-bd_dom       
SUPFAM
SSF82671   SSF82671        + More
SSF57184   SSF57184       
ProteinModelPortal
H9JV13  

Ontologies

KEGG
101743303    no KO assigned | (RefSeq) uncharacterized LOC101743303
GO
GO:0005509  

Topology

Length:
2404
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00697999999999998
Exp number, first 60 AAs:
0.00308
Total prob of N-in:
0.00032
outside
1  -  2404
 
 

Population Genetic Test Statistics

Pi
175.119003
Theta
164.214992
Tajima's D
-0.736244
CLR
1.16262
CSRT
0.187240637968102
Interpretation
Uncertain
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