Silkworm Genome Informatics Database

Gene

KWMTBOMO15953

Pre Gene Modal

BGIBMGA013377

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743303_[Bombyx_mori]

Location

Bomo_Chr27(-):3687715-3691970 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.909

CDS

ATGCCGAAGCAGCGGAACGACCGGCGAGCTCTTATCAGTGAGCAAGGCGAGCCTCGTGATAACACCAGTATCCAGAACGCCTCCCTGCCTTACATGCCCGCCAAGCGACCCTCGTCTTCGAAGAAGCTGGTGATCTCGGATCCCCCGAGTCACGATCCGCCCCCTCCCCCCGCACCAGCCGTGCTGATACCTCGAGCCAGGTTCCATCCTCATCACGGAGACAGTCGGGAGAATCTAGCCAGAAAGAGGAGTTTGGAGTTGAGCAGCGAGGCTAAGCTGATCAGCTACTTGGAGTCCGGGGCCGCCACTACTCACGACGAGATGCGAAGGAAGCACAGCTTGGAGTCTTCGTATAGCGCCAACAGGGATAGACCAAACAAAAAGGGAGCTTTAGTATCGGCCGGCTTTAAAGTATCCACCACGATCCGACCTGATGAGAATATGAAGGATGACAGAGACGATATGTCTTCGGTGAACAAAGCAGAGTTGGAAGCGGATTTAGCAAGATTCGACTCTTTAAGGAAGGCCTACAGGTAA

Protein

MPKQRNDRRALISEQGEPRDNTSIQNASLPYMPAKRPSSSKKLVISDPPSHDPPPPPAPAVLIPRARFHPHHGDSRENLARKRSLELSSEAKLISYLESGAATTHDEMRRKHSLESSYSANRDRPNKKGALVSAGFKVSTTIRPDENMKDDRDDMSSVNKAELEADLARFDSLRKAYR

Uniprot

H9JV14 A0A2A4K9R3 A0A2H1W4F4 A0A194PVP6 A0A0N1PHW1 A0A212FFN0 + More
A0A0L7LTQ2

Pubmed

19121390 26354079 22118469 26227816

EMBL

BABH01026488 NWSH01000003 PCG81035.1 ODYU01006276 SOQ47971.1 KQ459590 + More
KPI97461.1 KQ459933 KPJ19267.1 AGBW02008801 OWR52536.1 JTDY01000104 KOB78845.1

Proteomes

UP000005204 UP000218220 UP000053268 UP000053240 UP000007151 UP000037510 + More

PRIDE

H9JV14

Pfam

PF07645 EGF_CA + More
PF15950 DUF4758

Interpro

IPR000152   EGF-type_Asp/Asn_hydroxyl_site        + More
IPR018097   EGF_Ca-bd_CS
IPR013032   EGF-like_CS
IPR000742   EGF-like_dom
IPR000082   SEA_dom
IPR009030   Growth_fac_rcpt_cys_sf
IPR036364   SEA_dom_sf
IPR001881   EGF-like_Ca-bd_dom
IPR031866   DUF4758

SUPFAM

SSF57184 SSF57184 + More
SSF82671 SSF82671

ProteinModelPortal

H9JV14 A0A2A4K9R3 A0A2H1W4F4 A0A194PVP6 A0A0N1PHW1 A0A212FFN0 + More
A0A0L7LTQ2

KEGG

101743303 no KO assigned | (RefSeq) uncharacterized LOC101743303

GO

GO:0016021 GO:0005509 GO:0031514

Length:

178

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00065

Exp number, first 60 AAs:

0

Total prob of N-in:

0.70384

inside

1 - 178

Pi

225.798355

Theta

159.601328

Tajima's D

1.36487

CLR

1.547252

CSRT

0.753212339383031

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics