SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15949
Pre Gene Modal
BGIBMGA013378
Annotation
PREDICTED:_uncharacterized_protein_LOC101742721_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.906
 

Sequence

CDS
ATGTCAGGGATGACAGGTGCCAGCATGCTTCGTACGCGCCGCAAGGATGTCAACGTCAAGCCGAATCGGAAATTGGACCGGAAATCGTCCCGGGGCATGCTATACGAGAACGAAGAACTCCGACTACGCACAATAAACATAAATGCTGAAGTTGAAAGAGGTCAGTCAGACATAAAGAAGTTAAAACGTGAAAACGAACAGCTGAAGAGGGAGATATCGGCCCTTCGTTATGAATACGACAGACTGGACAGCATGCTCAGGGAGAGAAGGTCATCGCCAGAACACTCGGACGACAGCGTGTCGTTATGCAGCGCGTGTCCAGAATGTGCCAGTGTGGACGGTTCGTCGCGGGCGGTCGCCTTCCATGACCTGAGCGTGGTGCCTGAAGAAGGCGAACAGGAACCTAAGAGCGGCGGCGAGTCTCCGTGCACATGCGAAGAATGCCAAACAGAAGCCTCAAAGAAACCCGACGATAAGAACAATACAAGAACAATGAACCAACGCGAAAACAATGTGAAAATACGACCAATTATAGATGACAATGCACACGAGCGCGTAGTGGACGTTTTAGTACATGACGCACCGGCCGAAACACCTAGGTTCTTTCAATCGGTGACCACGCCCCCATACCAAATCACCGCACCACCACCGCCGGGCTTCGTCGTCGCTCCATACCAAACTCCCAGGTTCCACACCGGCGGAAACGTGGAAGACCTCCTCGGGGACGTCCAGTCGACCCCTACGATCCAGCAAACAACGTTTATACAGCAGAATTCCGTATTCATGTGCAACACAAGACGGATCACGCAAAAGCAGTGCTGCTGCCAAAGGGATCCCCCGCCTATCGCAATAAACGGCAACCCGCAGCCCGAGATACCGAAATCCTACGTGACCGAAAAGAATATCGAATTGACATATGATTATCCTAGAACGAAGCCAATACAGAGCTCGAAGAATTCAGGAGAGGATTTAACTACAACGACAGAAGTCGCAAGCACGGTTGTGTTTGTCGAAAGAAGGATCCCAGTTAAACCTAAGAAATTCGACTTTCTGTTCAGATCTCGATCAGCGCCGGTCGGTGAGAACGAGGAGCCGATATACGCGACCGTGAACAAGCTACCCAAAAGATTGCGTCGTATGGAGCTCGCTAATCTTGAGAAGGAAGTCGCGTATAGAGCAGGCGAACCGGACTCTTCGATAAGAACAGATGTTACACTGAAAACCGATTCAGAGTCGCAATTACCGCCGCCCGATGACGACACCAGTAGATCGGAGAGAGAAAAATCGACGGCACCTCAAAGGGCAGAGTCTCCGAAAGCAAAGAAACGTAAAAGGTTTTCGCTGACGTTCAAAAAGAGAGAACGAAAAAGAAAAGAGAAAAAGAAGAAAGAAGGTAAGAATGGGAATTCAAAGAATGGCGTGCCCAAGAACGGAGGACCTATGCTGGGAGAGTGTGACAACGAGAGGCTGATCGAAGGAGATGCACATGACGTATCGTGTGCTTCGCCAACGAATAAACACAAACATTGCACTCGGCATAGACCTAGGAATACAGTATCGTCGTCCAGCTCTGGCCCGCGCTTCAAGCGGGATAGCTATCAGGAAATAACATCGCACTCTGAGCACGAGCGAACGAACAGCTTGTGTTCTTCGGTGAACTCGCTGGGGTCAGCGTGCACCCACAAATCGAGAAAATTATCCGCCCCAACCAACGACACCTCCATACCGTGGTGCGGCTGCTGGGGAGCCGGGTCCTCCAAGCACGTTCAAACAACGTCGTCACATCCAAACTATTTATATTCGTAG
Protein
MSGMTGASMLRTRRKDVNVKPNRKLDRKSSRGMLYENEELRLRTININAEVERGQSDIKKLKRENEQLKREISALRYEYDRLDSMLRERRSSPEHSDDSVSLCSACPECASVDGSSRAVAFHDLSVVPEEGEQEPKSGGESPCTCEECQTEASKKPDDKNNTRTMNQRENNVKIRPIIDDNAHERVVDVLVHDAPAETPRFFQSVTTPPYQITAPPPPGFVVAPYQTPRFHTGGNVEDLLGDVQSTPTIQQTTFIQQNSVFMCNTRRITQKQCCCQRDPPPIAINGNPQPEIPKSYVTEKNIELTYDYPRTKPIQSSKNSGEDLTTTTEVASTVVFVERRIPVKPKKFDFLFRSRSAPVGENEEPIYATVNKLPKRLRRMELANLEKEVAYRAGEPDSSIRTDVTLKTDSESQLPPPDDDTSRSEREKSTAPQRAESPKAKKRKRFSLTFKKRERKRKEKKKKEGKNGNSKNGVPKNGGPMLGECDNERLIEGDAHDVSCASPTNKHKHCTRHRPRNTVSSSSSGPRFKRDSYQEITSHSEHERTNSLCSSVNSLGSACTHKSRKLSAPTNDTSIPWCGCWGAGSSKHVQTTSSHPNYLYS

Summary

Ontologies

GO

Topology

Length:
601
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00024
outside
1  -  601
 
 

Population Genetic Test Statistics

Pi
217.381129
Theta
157.835251
Tajima's D
0.764586
CLR
0.156398
CSRT
0.600569971501425
Interpretation
Uncertain
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