Gene

KWMTBOMO15947  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013423

Annotation

PREDICTED:_rho_GTPase-activating_protein_190_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr27(+):3464911-3505819      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.301

CDS

ATGGCAAAAAAATCTGATAATACTGGCGGGAAGCTGGTTACCATATCTGTAGTTGGTTTGTCTGGTACGGAAAAGGAGAAAGGGCAGCTAGGCGTGGGCAAGTCGTGCCTCTGTAACAGGTTTGTTCGAACCCACGCCGATGATTACAACGTCGATCACATTTGCGTTCTGAGTCAGTCGGATTTCAGCGGGCGCGTTGTGAACAACGATCATTTCCTGTACTGGGGCAACGTGCAGAAGGAGAACGACGATCAGGAGTACAGGTTCGAGATAGTCGAGCAGACCGAGTTTGTGGACGATGCGTGCTTTCAGCCGTTCAAAGTTGGCAAAACTGAACCGTACGTGAAGCGATGCGTCGCCACGAAACTCCAGTCGGCCGAGAAATACATGTACGTGTGCAAGAACCAGCTCGGCATAGAGAAGGAGTACGAGCAGAAACTGATGCCGGAAGGGAAGCTCACCGTTGACGGGTTCATGTGTGTCTATGACGTCAGCCTGGTGCCGGGGAGGACTTGGGAGAAACAGAACGAAATTATAGCGGCCATATTGCAGAATATAATCAAGCTCAAGAAGCCGGTTGTACTGGTGACTACGAAAAACGATGAGGCTTGCGACCAGGGAGTCCGGGAGGCCGAACGCTTAGTTCAAAGGAAAGAGTTCAAAGGTTCCATACCGATAGTGGAGACGTCCAGCCACGACAACGTCAATGTGGACCAAGCGTTCTTCCTGCTGGCCCAGATGATTGATAAGTCGAAAGCGAGGATCAAGGTGGCGAACTACGCGGAGGCTCTGCGCATAAGGCGGGAAACTTTGGACTTCGTGACGGAAGCGTTCACTCAGCTCATACGGATACACGTCGAGGATCATAAAGAATTATGGTCTTCTGTGAGCAAGAGGCTTTGTCATCACGCGGAGTGGATTAAGTTTGTTCAACAGTTTGGGAATGATGGTACTCAAGTCGTGTTCCGTCGGCACGTGCGCCGCCTCAAGGAGGAGCGCTCTGCGAAGAAGCTGCGGAACCAACTCGCCAAGCTGCCTCAAGTGTTGGCGAGACTCCAGCTGCCCACCGAAGAACTACAAGAGAACGACTGGCCGGTGGTGGTGCGGCAGCTGCGCCTGCACCGCGACTTCTCGGTGTACTTCAGCGAGGGCCGCGGCGCCGACTCGTGCTCCGAGACCGGCTCCGAGCTGGACAGCCCCCTCGCCATCGACACCACGCTGCGGGTCGGCGAGAGGACTCGCTATCAGACACTCGGTCAGTCGCAGAAGATACCCTACGAGATATTGGAGACGAACGAGGCAGCTGCGGTGTTCAAGTCCTTCCTTCACGAAGCCCAGGAGGAGCAGAGGAATTATGAATGGTGTCAGCAATTCAAACGTCTCCTGGAGGAGACCGGGTACGTGACCCCTGGGAAGCAGCTGTCGGAGGTGCGCGTGCTGCTGATGGGCAGGGAGTGCTACGAGGCCCTCTCCGAAGAACAACAGCAGAGGGTCTACGACCAGCACCAGAGGCAGATACAGCGTCGGGCGAAACACAACTTTCAGGAGTTGCTACTGGAGCACGCGGACCTGTTCTACCATTTCAAGAGCATATCGCCGACCGGGACCATAACGCAAGAAGACATCAAGGAAATCACCGATGTGCTGCAAGATGACTTTAGGTACAAAATGCTGGATCGGATGGAGCAAGACAGGAAGCTGATGCTGTTCCAGCACCTCGGGTTCGTGCACTGCCCGATGCGGGAGCACTGCCCCGCCGGACCCAACTGTCTGGACGCCACCCTGCCCGTCATACTCAACACCAGAGTCGGGTCGCTGACGTCGGCAGGCGAGTCCCAGTGCCTGGCCGGGCCGCCCGCCGCGCCCTGGGCCCTCACCACCGACACCAACCACATCAACGTCATCATCCTCGGGATGGAAGGTGTGGCTGGCGAATTCGGCAAGCGCCTGATGGCCGGCTGCGACTCCGAGCGGCGCATCAACGTGCACGGACACAGCTGGAGGCTCGAGCAGAGGATCAGGACCGATGACTTCTCTGAAACGACCTCCATAGACGATTTTGCACCTAATGGCTACTTCTGTGTGTATCAAGATCAAGAATCTTTTGAATACATCCGAGCTTGTGCCGAGAAGACTTTGCTTTGTAGTTTGGAACAAGAAGACAAACTGCCTTTTCAAGGTCTGCCGCTAGTCGTGATGTTCGTACAAGACGAGGGAATGGATAAGAAGGAGCTGGCCAGACTCCAAGAGGAGGGTCAGAATCTCGCCGACAACCTCCACTGCTCGTATATGGAGGCGTCCATCGGCGAGCTGGGCACGGAGGCGCTGACCCGCGAGGCGGTGCAGGAGCTGGTGCGCGCCAACAGGGACAAGGCGAGCTACGCGCATTTGTACCGTGACGTCATTGTGTGCTTCGACTCCGATATCAGAATAATGGTGTGCATGTTCTGCGACGACCCGTACTCGGCGGAGCGAGTGCTGAGTCCGTTCCTGTCGCACCGCGGCTGCTTCCTCACCGGCGACCGCTCGCTGCTCATAGAGACCTTCCTCGGAGACTCCAAACGGAAGGTCGAGGTAATAATATCAAGTTTCCACGGAGCCAGTCAATTCAGAGAGGAGCTGATACACGGTTTCATTCTGATTTATTCGGCGAAGAGAAAAGCCAGCTTAGCTACCTTAAATGCGTTTTCGATGAACATACCAAACCTGCCAATACAAATGGTGGCGGTGACGGAGGGCGGCGGCTCGGCGGCCAGCGCGTTCTTCGGCACGGACGTCGGGCACGCGCTGCTCACGGACGGGAACGCCACCGCCGACCGCCTCGCCGCGCACTTCGCCACCTACTCCTGCAGCGCAGACGCCAAATCCGCGTTCTACACGTCGTTCTTCAAGGAGGTGTGGGAGCGCAAGGGCGAGATCGAGCGCGCCTTCCGCCTGGAGCAGCCCGGCGCCGCGCACAACCTGCCCGACGTGGCCGCGGCGCGCGCGCCCGCTCGCTGCGACCCCGCGAGGGAGCACAAGTTAACGAACTCGTTGGATCTGCTCATCGGGCCCGACTCGAGAGCCGACATCGACTCTGAGTACAGCGACACCCTGAACAACTCCAAGAACAGAGGATTCTTGAAAGGTTTCAGCGTGTACCCCCCTCCCAGCACGCCGCCGGAGCCTGCGCCCCCGGACCACAGAATGCACCCGGATTTGTCTCCGGATCTCAACTGTTCTGAAGATTCACTGAGCACACACGAGTCAGATGGCGGTGGGTTGTGGCAGCCTCCCGGCTACGGGCACCGCGCCTTTACCACGGGACGCACGCGCCCGCACCCGCCGCCCCCGCGCCCCCGACACTCACAGACGCTCAAGCAACCCGGTAAATTGGACATGAACAACTACACGATGGTCAGCGACGCTCTACAACACATCACTATAGGTCCCCCGGCTCACTCCCGAGACAGGAAGTCTCAACGTTCCGGCTGGTCACACTCGAGCGGTCAGCAGGGTCACCACCACCACCCCTCCGGAGTCAGCTCGGAAACTGAACTGGATGCTCAATACGCGCAGATTAAAGAAACGAACGAGTATATGGAGGCGCCATCTATGACGCGCTTGAGGAGACATCGGAGACACGAGAAGACACCGCTGCACCAACCATCGTTCTCGGAGACGGACAGTTCCGGTTCTAGCGAAGCGTCCGGTGCCGGACGCGCGCCCGCCCGCCGCCGCCACGCCGCGCACCACGCGCCGCGACACTACAAGAAACGGTCCTTAGGTAACCTGGTGGCGGTGCAAAGCCCGCGAGTCCCGAAGCTCGGCATGTTCGTGGGGCCGCCGGAGCTGCCCACCGGCTACAGAGGTAGAACGCAAGAGGACAAGGCCGCCAGCGAGTCTAGCGACGGCAGCTCGGACGCGGACACGCGGCGGGTGCGCCCGCTGCCGCCGCCCCCGCACCACGAGCCCACCCACAAGATACTTGCCGGCGAGTACCCGGCGTCGATACAGGAGAACTGTACGGCCAGCGCGCCGGACCCGCGCCGCAGACCTCACCCCTTCGGCAAACACGACAGGAGGCACAAGGAATTCTCGAAGAGTAAGGACAAGAAGAACTCATCACAAGCAGCCAATGCAGCGTCAATTCAGAATTGGGGTCCGCAGGGCGGACACGGCGTTCCACTGTTCGTAGAGAAGTGCATAGAGTTCATAGAGCGCGAAGGGCTGGGCTCCGAGGGACTGTACCGCGTGCCTGGAAATAGGGCTCACGTCGATATGCTCTTCACCAAGTTCTACGAAGATCCGAATATAGATTTAGATTCGCTAGACATACCCGTGAATGCTGTCGCCACTGCGCTCAAGGATTTCTTCTCGAAGAAATTACCGCCATTACTCGATGAGGCGAGCATGGCGCAATTGGAAGATATCGCGAAAGTGCACGTTGTGGGTACAGCGATGCGCGGCTGCATGGCGGGCGGCGTGGAGCTCAAGGACCGCAGCTGGCGGCTGCTGGCCCTGCGCGCGCTGCTGCACTCCGCGCTCACGCCGCTCGCGCGCGCCACGCTCGACTACTTGCTGCACCACTTCGCCAGATTGGATAGAATCTCTATAAACTCCTTAAAATGTTCATAA

Protein

MAKKSDNTGGKLVTISVVGLSGTEKEKGQLGVGKSCLCNRFVRTHADDYNVDHICVLSQSDFSGRVVNNDHFLYWGNVQKENDDQEYRFEIVEQTEFVDDACFQPFKVGKTEPYVKRCVATKLQSAEKYMYVCKNQLGIEKEYEQKLMPEGKLTVDGFMCVYDVSLVPGRTWEKQNEIIAAILQNIIKLKKPVVLVTTKNDEACDQGVREAERLVQRKEFKGSIPIVETSSHDNVNVDQAFFLLAQMIDKSKARIKVANYAEALRIRRETLDFVTEAFTQLIRIHVEDHKELWSSVSKRLCHHAEWIKFVQQFGNDGTQVVFRRHVRRLKEERSAKKLRNQLAKLPQVLARLQLPTEELQENDWPVVVRQLRLHRDFSVYFSEGRGADSCSETGSELDSPLAIDTTLRVGERTRYQTLGQSQKIPYEILETNEAAAVFKSFLHEAQEEQRNYEWCQQFKRLLEETGYVTPGKQLSEVRVLLMGRECYEALSEEQQQRVYDQHQRQIQRRAKHNFQELLLEHADLFYHFKSISPTGTITQEDIKEITDVLQDDFRYKMLDRMEQDRKLMLFQHLGFVHCPMREHCPAGPNCLDATLPVILNTRVGSLTSAGESQCLAGPPAAPWALTTDTNHINVIILGMEGVAGEFGKRLMAGCDSERRINVHGHSWRLEQRIRTDDFSETTSIDDFAPNGYFCVYQDQESFEYIRACAEKTLLCSLEQEDKLPFQGLPLVVMFVQDEGMDKKELARLQEEGQNLADNLHCSYMEASIGELGTEALTREAVQELVRANRDKASYAHLYRDVIVCFDSDIRIMVCMFCDDPYSAERVLSPFLSHRGCFLTGDRSLLIETFLGDSKRKVEVIISSFHGASQFREELIHGFILIYSAKRKASLATLNAFSMNIPNLPIQMVAVTEGGGSAASAFFGTDVGHALLTDGNATADRLAAHFATYSCSADAKSAFYTSFFKEVWERKGEIERAFRLEQPGAAHNLPDVAAARAPARCDPAREHKLTNSLDLLIGPDSRADIDSEYSDTLNNSKNRGFLKGFSVYPPPSTPPEPAPPDHRMHPDLSPDLNCSEDSLSTHESDGGGLWQPPGYGHRAFTTGRTRPHPPPPRPRHSQTLKQPGKLDMNNYTMVSDALQHITIGPPAHSRDRKSQRSGWSHSSGQQGHHHHPSGVSSETELDAQYAQIKETNEYMEAPSMTRLRRHRRHEKTPLHQPSFSETDSSGSSEASGAGRAPARRRHAAHHAPRHYKKRSLGNLVAVQSPRVPKLGMFVGPPELPTGYRGRTQEDKAASESSDGSSDADTRRVRPLPPPPHHEPTHKILAGEYPASIQENCTASAPDPRRRPHPFGKHDRRHKEFSKSKDKKNSSQAANAASIQNWGPQGGHGVPLFVEKCIEFIEREGLGSEGLYRVPGNRAHVDMLFTKFYEDPNIDLDSLDIPVNAVATALKDFFSKKLPPLLDEASMAQLEDIAKVHVVGTAMRGCMAGGVELKDRSWRLLALRALLHSALTPLARATLDYLLHHFARLDRISINSLKCS

Uniprot

H9JV60   A0A3S2TRZ6   A0A2H1V6C9   A0A194PVW5   A0A1Y1KQ67   A0A1Y1KQ54   + More
A0A1Y1KQ68   A0A1Y1KTM3   A0A1Y1KSJ7   A0A1Y1KSI6   A0A139WPM0   D6W848   A0A139WPB0   A0A139WPL6   A0A139WPT7   A0A139WPB3   E2C5J7   A0A0J7L0Y0   A0A1B6D9I5   A0A310SAT8   F4WQS4   E2A9N1   A0A195CZU1   A0A195EG12   A0A1B6DTL1   A0A195BRL7   A0A1B6C2R3   A0A026WFE0   A0A195ERU0   N6TE97   A0A232EWD7   A0A1B6K9C5   A0A1B6LPU4   A0A2S2QI88   E0VLS6   J9K7E6   A0A2S2P1B2   A0A0P6J4T1   A0A182GV26   A0A1Q3G0P2   A0A1Q3FVT6  

Pubmed

19121390    26354079    28004739    18362917    19820115    20798317    + More
21719571    24508170    23537049    28648823    20566863    26999592    26483478   

EMBL

BABH01026459    BABH01026460    BABH01026461    BABH01026462    BABH01026463    RSAL01000012    + More
RVE53521.1    ODYU01000720    SOQ35952.1    KQ459590    KPI97467.1    GEZM01076910    JAV63559.1    GEZM01076916    JAV63549.1    GEZM01076914    JAV63552.1    GEZM01076909    JAV63560.1    GEZM01076913    GEZM01076911    JAV63558.1    GEZM01076917    JAV63548.1    KQ971307    KYB29836.1    EFA10998.2    KYB29839.1    KYB29837.1    KYB29835.1    KYB29838.1    GL452770    EFN76810.1    LBMM01001449    KMQ96291.1    GEDC01014951    JAS22347.1    KQ778189    OAD52014.1    GL888275    EGI63437.1    GL437918    EFN69833.1    KQ977041    KYN06136.1    KQ978983    KYN26834.1    GEDC01008319    JAS28979.1    KQ976424    KYM88586.1    GEDC01029497    JAS07801.1    KK107274    EZA53739.1    KQ981993    KYN30896.1    APGK01032712    KB740848    KB632411    ENN78679.1    ERL95234.1    NNAY01001878    OXU22660.1    GEBQ01031930    JAT08047.1    GEBQ01014443    JAT25534.1    GGMS01008218    MBY77421.1    DS235281    EEB14332.1    ABLF02022299    ABLF02022300    GGMR01010576    MBY23195.1    GDUN01000811    JAN95108.1    JXUM01090180    JXUM01090181    JXUM01090182    JXUM01090183    JXUM01090184    JXUM01090185    KQ563823    KXJ73225.1    GFDL01001677    JAV33368.1    GFDL01003348    JAV31697.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000007266    UP000008237    UP000036403    + More
UP000007755    UP000000311    UP000078542    UP000078492    UP000078540    UP000053097    UP000078541    UP000019118    UP000030742    UP000215335    UP000009046    UP000007819    UP000069940    UP000249989   

PRIDE

H9JV60   

Pfam

PF00620   RhoGAP        + More
PF00071   Ras
PF16512   RhoGAP-FF1

Interpro

IPR002713   FF_domain        + More
IPR036517   FF_domain_sf       
IPR000198   RhoGAP_dom       
IPR008936   Rho_GTPase_activation_prot       
IPR032835   RhoGAP-FF1       
IPR039007   pG1       
IPR027417   P-loop_NTPase       
IPR039006   RhoGAP_pG2       
IPR001806   Small_GTPase       

SUPFAM

SSF52540   SSF52540        + More
SSF48350   SSF48350       
SSF81698   SSF81698       

Gene 3D

1.10.10.440     1.10.555.10    

ProteinModelPortal

H9JV60   A0A3S2TRZ6   A0A2H1V6C9   A0A194PVW5   A0A1Y1KQ67   A0A1Y1KQ54   + More
A0A1Y1KQ68   A0A1Y1KTM3   A0A1Y1KSJ7   A0A1Y1KSI6   A0A139WPM0   D6W848   A0A139WPB0   A0A139WPL6   A0A139WPT7   A0A139WPB3   E2C5J7   A0A0J7L0Y0   A0A1B6D9I5   A0A310SAT8   F4WQS4   E2A9N1   A0A195CZU1   A0A195EG12   A0A1B6DTL1   A0A195BRL7   A0A1B6C2R3   A0A026WFE0   A0A195ERU0   N6TE97   A0A232EWD7   A0A1B6K9C5   A0A1B6LPU4   A0A2S2QI88   E0VLS6   J9K7E6   A0A2S2P1B2   A0A0P6J4T1   A0A182GV26   A0A1Q3G0P2   A0A1Q3FVT6  

PDB

6D4G     E-value=7.06835e-67,     Score=650

KEGG

101742582    K13709 Rho GTPase-activating protein 5 | (RefSeq) rho GTPase-activating protein 190

GO

GO:0007165   GO:0003924   GO:0005525   GO:0007264   GO:0006811   GO:0005220   GO:0005783   GO:0006816   GO:0000287   GO:0006281   GO:0006259  

Length:

1538

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02849

Exp number, first 60 AAs:

0.00692

Total prob of N-in:

0.00041

outside

1  -  1538

 

 

Pi

229.454927

Theta

170.956273

Tajima's D

1.196159

CLR

0.141623

CSRT

0.71636418179091

Interpretation

Uncertain