Gene

KWMTBOMO15944

Pre Gene Modal

BGIBMGA013381

Annotation

PREDICTED:_protein_THEM6_[Bombyx_mori]

Location

Bomo_Chr27(-):3402920-3411600      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.79

CDS

ATGTGGACGGTCTGCATCCCGGGATGGAGCGCGGCGATTGCGGCCGGCGCCATACTTCTGTACGGCACCCTGGATGTAGCGTATTTTGCCCGGATGATGTACACCGTGGCTAAAGCGCGCTACTTCAAGAAGAAATGTTGTATACTAGACACCACTGAGGTCCAATCTTGGTGTCTTCTCACTGATATCGATACTCTGCTGTACCACATGAATAATGCTCGTTATCTCCGCGAATTGGACTTCGCTCGAGCTGACTTCTACGAGCGGACCGGGCTCTATGCGAACATCAAAGCGGCTGGAGGCGCGGTCGTCCAGGGCGCCGCCACAATAAGATACAGGCGCTACTTGAAGCCCTTCACCAGGTTTACTATAACGTCCAAGGCTGTCTACTGGGACGACAGGACCTTCTTCATGGAGCACGAATTCGTAGGTCCAGGCGGCTTCGTTCACGCCATCGCCGTCTGCCGGCAAAGGGTCATTGACACTTCTGCTTCTGCTATAGCTGAGTTATTGCTCCAACTGCACTGTGCTGGATCTTGTAGGCCGGCTCCCGGGAAGATACCTCCCGAGTTGGAGCTTTGGGTGCAGAGCAACGAGCTGAGTTCGGCCAAACTGCGGGCCGTCAATGCCCCACTCCCAACCATCCCTTCCCCGAGTAATATCGGATGCGGTGAGGTTATACCCACAGTGACAACTGAATGA

Protein

MWTVCIPGWSAAIAAGAILLYGTLDVAYFARMMYTVAKARYFKKKCCILDTTEVQSWCLLTDIDTLLYHMNNARYLRELDFARADFYERTGLYANIKAAGGAVVQGAATIRYRRYLKPFTRFTITSKAVYWDDRTFFMEHEFVGPGGFVHAIAVCRQRVIDTSASAIAELLLQLHCAGSCRPAPGKIPPELELWVQSNELSSAKLRAVNAPLPTIPSPSNIGCGEVIPTVTTE

Uniprot

A0A0N1IPC5   A0A0N1IMY0   A0A2A4JEY3   A0A212FB02   A0A3S2M8N8   A0A0C9RJ94   + More
A0A154NXP2   A0A0N0BE14   A0A0L7RK37   K7IZ91   Q16PY3   E1ZZ55   A0A195F4J9   A0A195CAZ8   A0A1B6H0F0   A0A026W3H1   E2B963   W5JNR7   A0A158N985   A0A182MFS2   A0A182H2U7   A0A1B6LHZ6   A0A182WJL9   A0A182FG63   A0A182IQ57   A0A151HZ00   A0A182RTY6   A0A1B6I721   A0A182UZL6   A0A182UGX1   A0A182WZ44   Q7QJ53   A0A182I2W2   A0A1J1HT82   A0A2A3ETB7   V9IJC2   A0A088AUJ7   A0A182P215   A0A1B6D6F7   A0A182KE82   A0A023F2A2   A0A0K8UBP7   A0A182SPR9   A0A182QE26   A0A0A1XKA9   F4W9F8   A0A084VQR8   B4R5C6   Q9W439   B3NXN4   B4I0F1   B3MQ36   A0A232FJX6   B4L6G6   Q8MR97   N6UTK1   A0A1I8PWL4   B0W3U1   A0A3B0J6V1   A0A1B0DJS3   A0A1Q3FS46   W8BLH8   A0A1B0C6H2   A0A0A9WB89   A0A0K8SS48   A0A0M4EMR9   A0A1C7CZH7   A0A1Y1MTD4   A0A1A9WAX2   A0A182NKN7   A0A2S2QH04   E0VCD5   A0A034VXM3   J9JMJ0   A0A2H8TT72   A0A1I8MM50   A0A2S2PQB1   A0A194R0V5   A0A194Q372   A0A2A4IW88   A0A2H1V3H5   A0A0L0CTC6   A0A1B0GB23  

Pubmed

26354079    22118469    20075255    17510324    20798317    24508170    + More
20920257    23761445    21347285    26483478    12364791    14747013    17210077    25474469    25830018    21719571    24438588    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    28648823    18057021    23537049    24495485    25401762    26823975    20966253    28004739    20566863    25348373    25315136    26108605   

EMBL

KQ460448    KPJ14680.1    KQ459572    KPI99592.1    NWSH01001707    PCG70379.1    + More
AGBW02009394    OWR50922.1    RSAL01000012    RVE53524.1    GBYB01008280    JAG78047.1    KQ434778    KZC04351.1    KQ435850    KOX70914.1    KQ414572    KOC71312.1    CH477769    EAT36415.1    GL435311    EFN73470.1    KQ981810    KYN35393.1    KQ978068    KYM97376.1    GECZ01001609    JAS68160.1    KK107453    EZA50583.1    GL446459    EFN87769.1    ADMH02000578    ETN65786.1    ADTU01008926    ADTU01008927    ADTU01008928    ADTU01008929    AXCM01001909    JXUM01024037    JXUM01024038    JXUM01024039    KQ560678    KXJ81304.1    GEBQ01022639    GEBQ01020684    GEBQ01016694    GEBQ01015867    GEBQ01007328    GEBQ01007059    JAT17338.1    JAT19293.1    JAT23283.1    JAT24110.1    JAT32649.1    JAT32918.1    KQ976714    KYM76949.1    GECU01025001    JAS82705.1    AAAB01008807    EAA04023.3    APCN01000188    CVRI01000020    CRK90770.1    KZ288192    PBC34291.1    JR050000    AEY61150.1    GEDC01016027    GEDC01002716    JAS21271.1    JAS34582.1    GBBI01002975    JAC15737.1    GDHF01028301    JAI24013.1    AXCN02000550    GBXI01002915    JAD11377.1    GL888030    EGI69133.1    ATLV01015302    KE525006    KFB40312.1    CM000366    EDX17222.1    AE014298    AAF46120.2    CH954180    EDV47335.1    CH480819    EDW52982.1    CH902621    EDV44462.2    NNAY01000095    OXU31034.1    CH933812    EDW05962.1    KRG07106.1    AY121707    AAM52034.1    APGK01016701    KB739937    KB632431    ENN82072.1    ERL95503.1    DS231833    EDS32238.1    OUUW01000003    SPP77767.1    AJVK01001043    AJVK01001044    AJVK01001045    GFDL01004670    JAV30375.1    GAMC01012350    GAMC01012349    JAB94206.1    JXJN01026629    GBHO01038943    JAG04661.1    GBRD01009627    GDHC01009677    JAG56197.1    JAQ08952.1    CP012528    ALC49108.1    GEZM01023404    JAV88408.1    GGMS01007846    MBY77049.1    DS235053    EEB11041.1    GAKP01011778    JAC47174.1    ABLF02015796    GFXV01004593    MBW16398.1    GGMR01018966    MBY31585.1    KQ460883    KPJ11428.1    KQ459586    KPI97855.1    NWSH01005657    PCG64075.1    ODYU01000339    SOQ34922.1    JRES01000037    KNC34654.1    CCAG010006530   

Proteomes

UP000053240    UP000053268    UP000218220    UP000007151    UP000283053    UP000076502    + More
UP000053105    UP000053825    UP000002358    UP000008820    UP000000311    UP000078541    UP000078542    UP000053097    UP000008237    UP000000673    UP000005205    UP000075883    UP000069940    UP000249989    UP000075920    UP000069272    UP000075880    UP000078540    UP000075900    UP000075903    UP000075902    UP000076407    UP000007062    UP000075840    UP000183832    UP000242457    UP000005203    UP000075885    UP000075881    UP000075901    UP000075886    UP000007755    UP000030765    UP000000304    UP000000803    UP000008711    UP000001292    UP000007801    UP000215335    UP000009192    UP000019118    UP000030742    UP000095300    UP000002320    UP000268350    UP000092462    UP000092460    UP000092553    UP000075882    UP000091820    UP000075884    UP000009046    UP000007819    UP000095301    UP000037069    UP000092444   

PRIDE

Q9W439    Q8MR97   

Interpro

IPR029069   HotDog_dom_sf       

SUPFAM

SSF54637   SSF54637       

ProteinModelPortal

A0A0N1IPC5   A0A0N1IMY0   A0A2A4JEY3   A0A212FB02   A0A3S2M8N8   A0A0C9RJ94   + More
A0A154NXP2   A0A0N0BE14   A0A0L7RK37   K7IZ91   Q16PY3   E1ZZ55   A0A195F4J9   A0A195CAZ8   A0A1B6H0F0   A0A026W3H1   E2B963   W5JNR7   A0A158N985   A0A182MFS2   A0A182H2U7   A0A1B6LHZ6   A0A182WJL9   A0A182FG63   A0A182IQ57   A0A151HZ00   A0A182RTY6   A0A1B6I721   A0A182UZL6   A0A182UGX1   A0A182WZ44   Q7QJ53   A0A182I2W2   A0A1J1HT82   A0A2A3ETB7   V9IJC2   A0A088AUJ7   A0A182P215   A0A1B6D6F7   A0A182KE82   A0A023F2A2   A0A0K8UBP7   A0A182SPR9   A0A182QE26   A0A0A1XKA9   F4W9F8   A0A084VQR8   B4R5C6   Q9W439   B3NXN4   B4I0F1   B3MQ36   A0A232FJX6   B4L6G6   Q8MR97   N6UTK1   A0A1I8PWL4   B0W3U1   A0A3B0J6V1   A0A1B0DJS3   A0A1Q3FS46   W8BLH8   A0A1B0C6H2   A0A0A9WB89   A0A0K8SS48   A0A0M4EMR9   A0A1C7CZH7   A0A1Y1MTD4   A0A1A9WAX2   A0A182NKN7   A0A2S2QH04   E0VCD5   A0A034VXM3   J9JMJ0   A0A2H8TT72   A0A1I8MM50   A0A2S2PQB1   A0A194R0V5   A0A194Q372   A0A2A4IW88   A0A2H1V3H5   A0A0L0CTC6   A0A1B0GB23  

KEGG

101742004    no KO assigned | (RefSeq) protein THEM6

GO

GO:0016021  

Length:

233

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

26.3859699999999

Exp number, first 60 AAs:

22.10769

Total prob of N-in:

0.46801

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  29

outside

30  -  233

 

 

Pi

212.695156

Theta

206.649348

Tajima's D

1.927591

CLR

0.242601

CSRT

0.869206539673016

Interpretation

Uncertain