Silkworm Genome Informatics Database

Gene

KWMTBOMO15932

Pre Gene Modal

BGIBMGA013389

Annotation

hypothetical_protein_RR46_01267_[Papilio_xuthus]

Location

Bomo_Chr27(-):2419357-2423518 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.079

CDS

ATGATGGAAGGAAGGACCATCGATTACAGGCCGGACGGTGGTGGCCTTGACTACCACAATTCCCCGCTGATGGCCGAAATACCAGTAGACAATTATTCCCATATACATAGAAGCATAGAGCACCTAAGATCAATAGTGCCAACGCCTTTAGACCATCACAGGCATCTAGCAACGAATCTAGCGGACTTGAGACGGTACGAACATCCTGATGAGATGCCGGAGATTAAGCCTTCGGTTTTGAGGTTGAGCGAATTTAAGAGCGGCTTGCAGGATATGAGGTCGCACAACGAACAAGAGAACGACTCCCACAGACAGCTGACGTCACAAGACGACGGCCCCAAGGGTTACAGCGCGCCTTCGACTCCCCTATCAGAGAACGGAGGGCAGAACATTCAAGAGGAAAAGGACTAA

Protein

MMEGRTIDYRPDGGGLDYHNSPLMAEIPVDNYSHIHRSIEHLRSIVPTPLDHHRHLATNLADLRRYEHPDEMPEIKPSVLRLSEFKSGLQDMRSHNEQENDSHRQLTSQDDGPKGYSAPSTPLSENGGQNIQEEKD

Uniprot

H9JV26 A0A0C5AMJ7 A0A0N0P9A8 A0A0N1PI58 A0A2H1WAK9 A0A2A4J9X4 + More
A0A212ENY5 A0A0L7LS22 A0A084VWR6 A0A182FNZ7 W5JI58

Pubmed

19121390 26354079 22118469 26227816 24438588 20920257 + More
23761445

EMBL

BABH01026336 KM879339 AJK22578.1 KQ459572 KPI99578.1 KQ460448 + More
KPJ14667.1 ODYU01007385 SOQ50098.1 NWSH01002475 PCG68222.1 AGBW02013586 OWR43198.1 JTDY01000212 KOB78270.1 ATLV01017719 KE525181 KFB42410.1 ADMH02001110 ETN64077.1

Proteomes

UP000005204 UP000053268 UP000053240 UP000218220 UP000007151 UP000037510 + More
UP000030765 UP000069272 UP000000673

PRIDE

H9JV26

Pfam

PF00096 zf-C2H2

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf
IPR037800   GCN5

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9JV26 A0A0C5AMJ7 A0A0N0P9A8 A0A0N1PI58 A0A2H1WAK9 A0A2A4J9X4 + More
A0A212ENY5 A0A0L7LS22 A0A084VWR6 A0A182FNZ7 W5JI58

KEGG

101738651 K23480 zinc finger protein 362/384 | (RefSeq) rn, rotund; zinc finger protein rotund-like

GO

GO:0003676

PANTHER

PTHR45750

Length:

136

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.41085

outside

1 - 136

Pi

214.489246

Theta

199.703829

Tajima's D

0.24199

CLR

0.148949

CSRT

0.434978251087446

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics