Gene

KWMTBOMO15931

Pre Gene Modal

BGIBMGA013390

Annotation

PREDICTED:_zinc_finger_protein_rotund_isoform_X1_[Papilio_polytes]

Location

Bomo_Chr27(-):2364819-2366768      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.224

CDS

ATGTCATCCAAGGGCGAAATTCGCTTTCCGCTGGTGTTCGGCTCCAAGGCCGACCTTCAGCTCCACACGCAGATCCATCTCCGAGAAGCCAAGCCCTACCGGTGTACGCAGTGTCCGAAGGCTTTCGCCAATTCGTCATACCTAGCCCAGCATTCCCGTATCCATTTGGGCATAAAGCCTTACCGCTGTGAAATTTGCCAGAGGAAGTTCACTCAGCTGTCCCACCTCCAGCAACACATCAGGACGCACACCGGCGACAAGCCCTACCGTTGCACGCAGATCGGGTGCACGAAAGCTTTCTCCCAGCTATCGAATCTCCAAAGCCACAGTCGTTGCCACCAAACCGACAAGCCCTTCAAATGCAACTCTTGCTATAAATGTTTCACACACGAGAAAGACTTGCTCGAACACATCCCCAAGCATAAAGAATCGAAGCACCTCAAAACGCACATATGCCAGTACTGTGGGAAAAGTTATACGCAAGAGACGTATCTCAGTAAGCACATGAATAAGCACGCGGAGAGGGCTGACAAGCGGCCGCCTATCTCGGCGTTAGGGCTGAGCGGCTTGAACAGGTCCCTAGCTGCAGCAGCGCCGACGGCCGCGCCTTTCGCAGACCATCCATACTGGCCCAAAGTCAGTCCTGATTCGGCAGCCCACATGTCCGACGAGGGCGGGTACCATCAGCAACGTGAAAGCGACGACCACCACGAGCAGCAGATGCAGCAACAGCGGGCGCTGTTCGCTCAGCACGAGAGCCAGGACGACAGGATCCAGCCCCCCGTGTCTTCCGCCGCGAACTCCGCGTTCACGCCGATAAACTCGATGGCCCCGCATTTGAATGGCCTGTCGCACCACAGCGCGTTGCCGACTCGGCCGTATCTCTACGACCCCCTGCACTTCCAGCAAGGGAAGCAGCAGCCCGGCTCCTTCCCAAACCAGCTCATTTCCTTACACCAGATCAGGAATTACGCGCATCAGCCCTCGGCGTTGCTGCCCGCAGAACACATCCTACCGCACGCTCTATCGCACAAAGATAAACAGTAA

Protein

MSSKGEIRFPLVFGSKADLQLHTQIHLREAKPYRCTQCPKAFANSSYLAQHSRIHLGIKPYRCEICQRKFTQLSHLQQHIRTHTGDKPYRCTQIGCTKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFTHEKDLLEHIPKHKESKHLKTHICQYCGKSYTQETYLSKHMNKHAERADKRPPISALGLSGLNRSLAAAAPTAAPFADHPYWPKVSPDSAAHMSDEGGYHQQRESDDHHEQQMQQQRALFAQHESQDDRIQPPVSSAANSAFTPINSMAPHLNGLSHHSALPTRPYLYDPLHFQQGKQQPGSFPNQLISLHQIRNYAHQPSALLPAEHILPHALSHKDKQ

Uniprot

A0A0C5AMJ7   A0A2A4J9X4   A0A2H1WAI6   A0A0N1ICN8   A0A212ENY5   A0A0L7LSB4   + More
Q1DGT1   Q17H86   A0A182MW03   A0A139W8M7   A0A182UPY1   A0A139W8M5   A0A1Y1MCH6   A0A1B0CD76   N6TGP9   A0A1W4WFD8   A0A1W4W4V7   A0A1W4W4T1   B0XLM0   A0A336K0R1   A0A1A9WL87   A0A0Q9X8D2   A0A2J7QN56   A0A182HC33   A0A182H7R5   A0A0C9QFG2   A0A158NWY6   A0A088AR39   A0A195C1W4   E1ZWD7   A0A0N0U741   A0A195F6D0   E9IQB0   A0A0J7K394   A0A3Q0ITE4   A0A0L7R8X5   A0A3L8E3E0   A0A3Q0IMU7   A0A1B0C421   A0A3Q0IN16   A0A0C9RI28   Q17BW8   A0A1S4F8N0   A0A1J1IY97   A0A2P2IEI9   A0A1B6KXK3   T1H9N7   A0A1B6FA91   A0A2R7W9E4   A0A182GCW3   A0A224XID6   A0A0K8S414   E0VJL2   A0A1B6FHE7   A0A2P8YGN9   X5JB75   T1JKT8   A0A2A3EDG6   F4WXG9   A0A0P4WLZ9   A0A182U917   A0A182UEK7   W8CDL0   A0A182QTJ1   A0A1A9Y073   A0A182IRT1   A0A1A9ZT99   A0A1B0FPQ8   F5HM69   A0A067QUI3   A0A2R5LCR5   A0A2C9GPP0   Q7PYS1  

Pubmed

26354079    22118469    26227816    17510324    18362917    19820115    + More
28004739    23537049    17994087    26483478    21347285    20798317    21282665    30249741    20566863    29403074    24519327    21719571    24495485    12364791    24845553    14747013    17210077   

EMBL

KM879339    AJK22578.1    NWSH01002475    PCG68222.1    ODYU01007385    SOQ50099.1    + More
KQ459572    KPI99577.1    AGBW02013586    OWR43198.1    JTDY01000212    KOB78269.1    CH900500    EAT32360.1    CH477252    EAT46004.1    AXCM01004778    KQ973123    KXZ75641.1    KXZ75640.1    GEZM01037650    JAV82005.1    AJWK01007463    AJWK01007464    APGK01038816    APGK01038817    KB740963    ENN76968.1    DS234556    EDS34433.1    UFQS01000006    UFQT01000006    SSW97048.1    SSX17435.1    CH933806    KRG00897.1    NEVH01013200    PNF30009.1    JXUM01032863    KQ560969    KXJ80180.1    JXUM01028520    KQ560824    KXJ80733.1    GBYB01002139    JAG71906.1    ADTU01028821    KQ978344    KYM94864.1    GL434809    EFN74506.1    KQ435711    KOX79644.1    KQ981805    KYN35619.1    GL764688    EFZ17239.1    LBMM01015843    KMQ84641.1    KQ414631    KOC67278.1    QOIP01000001    RLU27211.1    JXJN01025254    GBYB01012847    JAG82614.1    CH477315    EAT43785.1    CVRI01000063    CRL04532.1    IACF01006839    LAB72422.1    GEBQ01023815    JAT16162.1    ACPB03022328    GECZ01022627    JAS47142.1    KK854491    PTY16306.1    JXUM01054869    JXUM01054870    JXUM01054871    JXUM01054872    KQ561841    KXJ77376.1    GFTR01005612    JAW10814.1    GBRD01017810    JAG48017.1    DS235226    EEB13568.1    GECZ01020152    JAS49617.1    PYGN01000609    PSN43403.1    HG794499    CDK60411.1    JH431842    KZ288289    PBC29269.1    GL888424    EGI61135.1    GDRN01030761    JAI67538.1    GAMC01001761    JAC04795.1    AXCN02001154    CCAG010010748    AAAB01008987    EGK97391.1    KK852995    KDR12712.1    GGLE01003133    MBY07259.1    APCN01002019    APCN01002020    EAA01436.5   

Proteomes

UP000218220    UP000053268    UP000007151    UP000037510    UP000008820    UP000075883    + More
UP000007266    UP000075903    UP000092461    UP000019118    UP000192223    UP000002320    UP000091820    UP000009192    UP000235965    UP000069940    UP000249989    UP000005205    UP000005203    UP000078542    UP000000311    UP000053105    UP000078541    UP000036403    UP000079169    UP000053825    UP000279307    UP000092460    UP000183832    UP000015103    UP000009046    UP000245037    UP000242457    UP000007755    UP000075902    UP000075886    UP000092443    UP000075880    UP000092445    UP000092444    UP000007062    UP000027135    UP000075840   

Pfam

PF00096   zf-C2H2

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

A0A0C5AMJ7   A0A2A4J9X4   A0A2H1WAI6   A0A0N1ICN8   A0A212ENY5   A0A0L7LSB4   + More
Q1DGT1   Q17H86   A0A182MW03   A0A139W8M7   A0A182UPY1   A0A139W8M5   A0A1Y1MCH6   A0A1B0CD76   N6TGP9   A0A1W4WFD8   A0A1W4W4V7   A0A1W4W4T1   B0XLM0   A0A336K0R1   A0A1A9WL87   A0A0Q9X8D2   A0A2J7QN56   A0A182HC33   A0A182H7R5   A0A0C9QFG2   A0A158NWY6   A0A088AR39   A0A195C1W4   E1ZWD7   A0A0N0U741   A0A195F6D0   E9IQB0   A0A0J7K394   A0A3Q0ITE4   A0A0L7R8X5   A0A3L8E3E0   A0A3Q0IMU7   A0A1B0C421   A0A3Q0IN16   A0A0C9RI28   Q17BW8   A0A1S4F8N0   A0A1J1IY97   A0A2P2IEI9   A0A1B6KXK3   T1H9N7   A0A1B6FA91   A0A2R7W9E4   A0A182GCW3   A0A224XID6   A0A0K8S414   E0VJL2   A0A1B6FHE7   A0A2P8YGN9   X5JB75   T1JKT8   A0A2A3EDG6   F4WXG9   A0A0P4WLZ9   A0A182U917   A0A182UEK7   W8CDL0   A0A182QTJ1   A0A1A9Y073   A0A182IRT1   A0A1A9ZT99   A0A1B0FPQ8   F5HM69   A0A067QUI3   A0A2R5LCR5   A0A2C9GPP0   Q7PYS1  

PDB

2I13     E-value=5.05335e-23,     Score=266

KEGG

101738651    K23480 zinc finger protein 362/384 | (RefSeq) rn, rotund; zinc finger protein rotund-like

GO

GO:0003676   GO:0005634   GO:0046872   GO:0003723   GO:0006811   GO:0005220   GO:0005783   GO:0006816   GO:0000287   GO:0006281   GO:0006259  

Length:

348

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00105

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.00872

outside

1  -  348

 

 

Pi

148.92659

Theta

179.074702

Tajima's D

-0.708914

CLR

0.404392

CSRT

0.1996400179991

Interpretation

Uncertain