Silkworm Genome Informatics Database

Gene

KWMTBOMO15926

Annotation

PREDICTED:_membrane-associated_guanylate_kinase?_WW_and_PDZ_domain-containing_protein_2-like?_partial_[Bombyx_mori]

Location

Bomo_Chr27(-):2193500-2199038 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.559

CDS

ATGTGTATTAACGTTGCTTTAAAAATGGCACAAAGCTCAGTGGATTCAGACAGATTGTCTTCAGCTGGAATTTCGACACATAGTTCTGGTACTGCTGGAAATGTAGGAGGTTCAGTAGTGGGCGTGAGAGCTGGAGAACCAGGCCAGAAAAGACAGGATGAAGATGACTATGATTTGGGACCCCTGCCTCCGATGTGGGAAAAAGCATTCACACCTGCTGGTGAAGTTTATTTTATTGATAACAACACTGGTACTTCGCACTGGCTTGATCCAAGACTCGCAAGGGTCCGTAAACACTCTCTAGGGGAATGTGGTGAAGACGAGCTGCCATATGGCTGGGAAAGAGTGACAGACGAACGTTATGGTTCATACTATGTTGACCATATTAATAGAAGGACCCAGTATGAGAACCCTGTACTCCAAGCAAGAAGATTAAGAGCGGAGAAACTTGCTGCCGAGAACACCACTAACGGTCAGTCCAACGGCCCGACCCCCGGGGGAGAGTTGCGCGGGAACAGATTAACAGTAAACCTCACTAAAGGACCACAGGTAACAGCACAGTCGTGGCATCAGCGCGGTCCTCTGGTAGTGGATTCACGAATTAGATCCGAAAGCGCAACTGTACAATTCGCGATCACTTTGTAA

Protein

MCINVALKMAQSSVDSDRLSSAGISTHSSGTAGNVGGSVVGVRAGEPGQKRQDEDDYDLGPLPPMWEKAFTPAGEVYFIDNNTGTSHWLDPRLARVRKHSLGECGEDELPYGWERVTDERYGSYYVDHINRRTQYENPVLQARRLRAEKLAAENTTNGQSNGPTPGGELRGNRLTVNLTKGPQVTAQSWHQRGPLVVDSRIRSESATVQFAITL

Uniprot

A0A194RHH1 A0A194QA62 A0A2H1VTS6 A0A2A4JY98 A0A3S2NDK9 A0A212F0Z5 + More

Pubmed

26354079 22118469

EMBL

KQ460207 KPJ16770.1 KQ459249 KPJ02314.1 ODYU01004403 SOQ44239.1 + More
NWSH01000442 PCG76400.1 RSAL01000085 RVE48357.1 AGBW02011006 OWR47402.1

Proteomes

UP000053240 UP000053268 UP000218220 UP000283053 UP000007151

Pfam

PF00397   WW        + More
PF00595   PDZ
PF17820   PDZ_6

Interpro

IPR001202   WW_dom        + More
IPR036020   WW_dom_sf
IPR036034   PDZ_sf
IPR001478   PDZ
IPR041489   PDZ_6

SUPFAM

SSF50156 SSF50156 + More
SSF51045 SSF51045

CDD

cd00201 WW

ProteinModelPortal

A0A194RHH1 A0A194QA62 A0A2H1VTS6 A0A2A4JY98 A0A3S2NDK9 A0A212F0Z5 + More

PDB

6J69 E-value=1.228e-14, Score=191

KEGG

105842917 no KO assigned | (RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein

GO

GO:0016301 GO:0005515 GO:0006508 GO:0005216 GO:0006811 GO:0005220 GO:0005783 GO:0006816 GO:0000287 GO:0006281 GO:0006259

Length:

214

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01199

Exp number, first 60 AAs:

0.01199

Total prob of N-in:

0.11169

outside

1 - 214

Pi

191.262801

Theta

199.432679

Tajima's D

0.613619

CLR

0.351635

CSRT

0.546672666366682

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics