SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15922
Pre Gene Modal
BGIBMGA001310
Annotation
PREDICTED:_membrane-associated_guanylate_kinase?_WW_and_PDZ_domain-containing_protein_1_[Papilio_xuthus]
Location in the cell
Extracellular   Reliability : 1.093
 

Sequence

CDS
ATGCACTCGCCGTTGAGACAGTCGCCATCTTGTTACGACGCCGACTCATTGGCTCAGTCCAATACCGTCTACGTGCCGAACTACCCGCAGGTCGAAGCCGGTGGCACGACGGACCCTGAGGCAGACGTACTGGTGCGGCTGGGGCGCGGAGCCGCGGGGTTCGGGTTCAGGATCGTGGGCGGCACCGAAGACGGGAGCAGAGTGGCTGTCGGTTACGTCGTGCCGGGCGGGCCGGCGGAGGGGCTGGTCCGCGCGGGGGACCTGCTGACGTCAGTGGACGGCGTGCCCGTGACGGGCGCCACGCACCAGCGCGCCGTGGCGCTCGTGTGCCGCGCCGCGCACCGCGGACACGTAAGGCGGCCTCGGCCTCAGCGTTACTTCATGACCTGTGACGTCATTTGTGCAAAAAAAACAGCTGACTCTACATCGCACACAATGACGTCTAGCCTAACTTGA
Protein
MHSPLRQSPSCYDADSLAQSNTVYVPNYPQVEAGGTTDPEADVLVRLGRGAAGFGFRIVGGTEDGSRVAVGYVVPGGPAEGLVRAGDLLTSVDGVPVTGATHQRAVALVCRAAHRGHVRRPRPQRYFMTCDVICAKKTADSTSHTMTSSLT

Summary

Pfam
PF17820   PDZ_6        + More
PF00397   WW
PF00595   PDZ
Interpro
IPR036034   PDZ_sf        + More
IPR001478   PDZ       
IPR041489   PDZ_6       
IPR036020   WW_dom_sf       
IPR001202   WW_dom       
SUPFAM
SSF50156   SSF50156        + More
SSF51045   SSF51045       
PDB
2Q9V     E-value=8.40469e-05,     Score=103

Ontologies

Topology

Length:
151
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00315
Exp number, first 60 AAs:
0.00166
Total prob of N-in:
0.07124
outside
1  -  151
 
 

Population Genetic Test Statistics

Pi
235.328868
Theta
127.850615
Tajima's D
3.14535
CLR
0
CSRT
0.985850707464627
Interpretation
Uncertain
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