Gene

KWMTBOMO15921

Pre Gene Modal

BGIBMGA001310

Annotation

Membrane-associated_guanylate_kinase?_WW_and_PDZ_domain-containing_protein_1_[Papilio_xuthus]

Location

Bomo_Chr27(-):2162668-2165898      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 0.987

CDS

ATGTCAAAGTACGGAGGCGTGCAGTACGACGCCACGCCCGCCAGCTGGGCCGGCGTGCCCTATGACGTCACGGTGACGCGCAGCGACGGCGAGGGCTTCGGGTTCGTCGTCATATCGTCGACCAACAAGGCCACGAGCACCATAGGTCAACTAATCCCGAACTCTCCGGCGGCGCGCTGCGGGCTGCTGCACGTGGGGGACACCATCGTGGCCATCAACCACGCGCCCGTCCGCAACCTCTCCCACCCCGAGGTGGTGGCGCTCATCAAGCGCTCCGGCACCACCGTCACGCTCACCGTGCTGCCGCCGGAGACCAGGCTCGACTGA

Protein

MSKYGGVQYDATPASWAGVPYDVTVTRSDGEGFGFVVISSTNKATSTIGQLIPNSPAARCGLLHVGDTIVAINHAPVRNLSHPEVVALIKRSGTTVTLTVLPPETRLD

Uniprot

H9IVM9   A0A0N1IC73   A0A194QA62   A0A194RHH1   A0A2A4JY98   A0A212F0Z5   + More
A0A1B6KXW3   A0A1B6FUK0   A0A1B6ILI7   A0A067R7W8   A0A1B6IZK3   A0A2P8ZHX5   A0A1B6CSV5   A0A1B6CAM6   A0A1B6CEB4   A0A1B6DAZ4   A0A026WDI4   A0A3L8DFS1   A0A1S3CYY8   A0A232FFC5   N6T9A8   U4UYY7   A0A1Y1LH66   A0A0N4Y997   A0A0K2SVR2   A0A1Y1LH87  

Pubmed

19121390    26354079    22118469    24845553    29403074    24508170    + More
30249741    28648823    23537049    28004739   

EMBL

BABH01039650    BABH01039651    BABH01039652    BABH01039653    BABH01039654    BABH01039655    + More
BABH01039656    BABH01039657    BABH01039658    KQ458895    KPJ04571.1    KQ459249    KPJ02314.1    KQ460207    KPJ16770.1    NWSH01000442    PCG76400.1    AGBW02011006    OWR47402.1    GEBQ01023736    JAT16241.1    GECZ01015889    JAS53880.1    GECU01019930    JAS87776.1    KK852819    KDR15614.1    GECU01015367    JAS92339.1    PYGN01000052    PSN56094.1    GEDC01020831    JAS16467.1    GEDC01026760    JAS10538.1    GEDC01025516    JAS11782.1    GEDC01014439    JAS22859.1    KK107274    EZA53736.1    QOIP01000008    RLU19307.1    NNAY01000287    OXU29466.1    APGK01047273    KB741077    ENN74313.1    KB632432    ERL95550.1    GEZM01055648    JAV72992.1    UYSL01020877    VDL76452.1    HACA01000224    CDW17585.1    GEZM01055647    JAV72993.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007151    UP000027135    + More
UP000245037    UP000053097    UP000279307    UP000079169    UP000215335    UP000019118    UP000030742    UP000038043    UP000271162   

PRIDE

H9IVM9   

Pfam

PF00595   PDZ        + More
PF13532   2OG-FeII_Oxy_2
PF17820   PDZ_6
PF00883   Peptidase_M17
PF02789   Peptidase_M17_N
PF00397   WW
PF00625   Guanylate_kin

Interpro

IPR000819   Peptidase_M17_C        + More
IPR037151   AlkB-like_sf       
IPR036034   PDZ_sf       
IPR008283   Peptidase_M17_N       
IPR027450   AlkB-like       
IPR001478   PDZ       
IPR005123   Oxoglu/Fe-dep_dioxygenase       
IPR041489   PDZ_6       
IPR011356   Leucine_aapep/pepB       
IPR036020   WW_dom_sf       
IPR001202   WW_dom       
IPR027417   P-loop_NTPase       
IPR008144   Guanylate_kin-like_dom       
IPR020590   Guanylate_kinase_CS       
IPR008145   GK/Ca_channel_bsu       

SUPFAM

SSF50156   SSF50156        + More
SSF51045   SSF51045       
SSF52540   SSF52540       

Gene 3D

2.60.120.590    

CDD

cd00433  Peptidase_M17
cd00201  WW

ProteinModelPortal

H9IVM9   A0A0N1IC73   A0A194QA62   A0A194RHH1   A0A2A4JY98   A0A212F0Z5   + More
A0A1B6KXW3   A0A1B6FUK0   A0A1B6ILI7   A0A067R7W8   A0A1B6IZK3   A0A2P8ZHX5   A0A1B6CSV5   A0A1B6CAM6   A0A1B6CEB4   A0A1B6DAZ4   A0A026WDI4   A0A3L8DFS1   A0A1S3CYY8   A0A232FFC5   N6T9A8   U4UYY7   A0A1Y1LH66   A0A0N4Y997   A0A0K2SVR2   A0A1Y1LH87  

PDB

1UEW     E-value=1.54813e-11,     Score=160

KEGG

101735377    K14834 nucleolar complex protein 3 | (RefSeq) nucleolar complex protein 3 homolog

GO

GO:0030145   GO:0005737   GO:0008235   GO:0016491   GO:0004177   GO:0016301   GO:0005515   GO:0006508   GO:0005216   GO:0006811   GO:0005220   GO:0005783   GO:0006816   GO:0000287   GO:0006281   GO:0006259  

PANTHER

PTHR11963  

Length:

108

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.018

Exp number, first 60 AAs:

0.01432

Total prob of N-in:

0.32897

outside

1  -  108

 

 

Pi

249.614127

Theta

153.473448

Tajima's D

1.600575

CLR

0.240138

CSRT

0.806559672016399

Interpretation

Uncertain