Gene

KWMTBOMO15901

Pre Gene Modal

BGIBMGA013403

Annotation

PREDICTED:_muscle_calcium_channel_subunit_alpha-1-like_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr27(-):1525590-1600283      View in EpiBrowser

Full name

Voltage-dependent L-type calcium channel subunit alpha       + More
Voltage-dependent calcium channel type D subunit alpha-1      
Muscle calcium channel subunit alpha-1      

Alternative Name

MDL-alpha-1

Location in the cell

PlasmaMembrane   Reliability : 4.375

CDS

ATGGCATCGATAGAGCAAACCCCGACGGTGGCTACGACCCCGTACATGGAGAACGTCACTGACCCGACACTGGCAGCAGCCGCCGCCGCGAAGAAACAGGCTCGGGGCAGAGGAAAAGCGCAACCAGAAAAACCTAAGAGGAGCTTGATGTGCCTCACTCTGGACAACCCTTTACGGAAACTATGTTATAGCATCGTTGAGTGGAAACCATTTGAATACATGATCTTGACCACGATCTTCGCAAATTGCATCGCCTTAGCGGTATTCACACCGTACCCGTTCGGAGATACGAACAACACAAATCAAATACTGGAAAAAGTGGAATGGGTTTTCATGGTGATATTCACCGGGGAGTGCATCATCAAGATCATAGCGTACGGCTTCTTTTTTCATCCAGGAGCCTATCTTCGGAATACTTGGAACAGTCTAGATTTTACTATAGTCACAATCGGTATTGCGAGTATGATACAACAGTACCTTTCGATAGATTTGTTCGACGTAAAAGCACTGAGAGCTTTCAGGGTACTGAGGCCCTTACGACTCGTTTCCGGAGTACCTAGTCTTCAAATAGTTCTGAATTCCATCCTGAAAGCCATGGTGCCGCTCTTTCACATAGCCTTCCTTGTGCTGTTCGTGATCATCATCTATGCCATCATAGGCTTGGAGCTGTTCTCGGGAGTGCTCCATGAAACTTGCTTCAACAATGAAACAGGTGAGACAATGGCGAACCCTGCGCCTTGTAGTAGCACTCAAGGCGATGGTATGAAGTGCAAAGACAATATGACTTGCAAGGGTTATTGGGATGGACCCAATGATGGGATCACCAATTTTGACAACATCGGATACGCCATGTTGACTGTCTTCCAATGTATCACGCTTGAAGGCTGGACAGATATTATGTATGCGGTGGCCAACGTCAAAGGCAAAACGTGGGTTTGGATCTACTTCGTGACTTTGGTGATCTTCGGGAACTTCTTCGTCATGAATCTGATCCTGGGTGTGTTGTCAGGTGAGTTTTCCAAAGAAAGAGAGAAAGCGAAGAGCCGTGGCGATTTCCAGAAGTCACGCGAAAGGCAACAGCTGGAAGAAGACATGAAGGGGTATCTGAATTGGATCACAGTTGCGGAAGAGCTGGACTTGGAGAATGAACAGACGCAGAATGAAGATGATCAGGACGCCCAGGGCAAGAAAGATAGAAAGAGCAATGAAGAATCACAGAATAATTTGAATGTGAACGGGGATCAAGTACAAACATCAAGATCCTATAGATTCGATAAGGTCAATCGTCGATTACGTAGAGCCTGCAGAATAGCCGTGAAGACACAGACTTTCTATTGGGCAATCATCATATTGGTATTCCTCAATACGCTGGTGCTAGCTACTGAACATTACAATCAACCTCGATGGCTTGATTATTTCCAGAACTACGCCAACTATTTTTTCGTTGTTCTGTTCACCCTTGAGATGATGCTGAAGATGTACGCGCTAGGATTTCAGGGCTACTTCGTATCCCTATTCAATCGCTTCGATTGCTTCATCATGGTCTGCTCTGTGGTGGAATTGGCGCTTACTTTAACAGAGACCATACCGCAGCTCGGTATCTCCGTGCTGAGGTGTGTCAGGCTACTAAGAGTCTTCAAGGTTACCAAGTATTGGCGGTCTCTTTCTAATCTCGTAGCATCTCTGCTTAACTCCATCCAGTCCATCTTCTCCCTTCTTCTGCTGCTATTCTTGTTTATCGTGATCTTCGCTTTACTTGGGATGCAAGTGTTTGGTGGGAGATTCGACTACGCGCCGGAAGCTGAGAAAGAGAGGCATAACTTCGATTCTTTCTGGCAGGCAGTTCTGACCATGTTTCAGATACTGACAGGCGAAGATTGGAATGTAGTCATGTATGAGGGGATCAAGGCATACGGAGGCGCCGGGACTCCGGGCATGCTGGCGTCTATATACTTCATCGTTATATTCATTTGCGGCAATTATATTTTACTAAACGTATTCTTGGCCATCGCTGTCGACAACCTCGGCGACGCAGAGGAAATGGATGCAATCGAAAAACAGAAAGAGATGGCAGAAAACGCTGAAGCCGGTAATGTGGTTCTCGATGAAGAAAGAGGAGAAACTGATGATGAATATGTTAACGAGGAAGAAGGATATTCTAATGAAGGATCTGAGAATGAATGTGAAGAGACCGGTTCTGAAGAAGACGTGGAAGAACAGGAACAAGAGGAGAAAGAGAATCCTCAAGATATATTGGTCACTATTGACAAAAAACAAAATGGAGACGTTAACAAAAAAGAATCAGAGCCCCATGTAACAATTTCGGCCCGACCTCGAAGGTTATCGGATGTGAACATCAAAACGCAAGAGAAGCCTATACCTGATGCCAGTAGCTTCTTTATACTCTCCAAGGATAATTGTTTTCGGGTGGCCTGCTACAATATTCAAAAAAATTCCTGGTTCAAGAATCTTATTCTGATATGCATCTTGGCGTCTTCCGTCATGCTGGCTTTGGAGGACCCTGTTACCAGCAACTTGAACACCCCTACTGGGATAAATGAGGTTCTACGCAACGTGGATTACTTCTTCACGGCTGTTTTTACAATTGAGCTGCTATTGAAGCTCATTACATACGGTTTTATACTGCACAAAGATTCTTTCTGTCGTTCTGGATTCAACTTGCTCGATTTGCTGGTTGTGATCGTGTCTTTTATATCGTTGGACAGATCAAACAGCGTCAACTTCATTAAGATTTTGAGGGTCTTCCGCGTTTTAAGGCCGCTTCGTGCCATAAACAGAGCCAAAGGTCTGAAGCACGTAGTTCAATGCGTGATCGTTGCTATAAAGACAATCGGAAACATATTATTGGTGACAAATCTTCTACAATTCATGTTTGCCGTTATGGGAGTGCAAATGTTCAAGGGTAGATTTTTTAAATGTACAGATATTACGAAGGACAATGAAAATGATTGCCATGGCACGTATCTCATTTACGAGAACGGCGAGGCCATAACGAACGATCGTTTGTGGCTGCGCAACAAATTCAACTTCGACGACGTCCTCAACGGTATGCTGACTCTTTTCACCGTCTCCACGTACGAGGGATGGCCGGCTCTGCTCTCCACATCAATGGATTCTAATAAAGAGAATCACGGACCTATAGAAAATTCAAGGCCGTTCGTCGCGTTCTTCTATATCAGCTACATCATTGTCATTGCCTTTTTTATGGTCAATATCTTCGTGGGCTTTGTCATAGTCACGTTCCAGAAAGAAGGAGAGCAAGAGTTCAAGGACTGCGAGCTGGATAAGAACCAGAGGAACTGTATAGAGTTCGCACTAAAAGCCAAACCGATCAGAAGATACATTCCAAAGCATCGCATCCAGTACAAGACTTGGTGGTTTGTGACCTCGCAGCGTTTTGAAAACGTCATCTTTTTCTTCATCGTGCTAAACACCATCGCGCTGATGATGAAGTTCCATGGCTCCAAAACGGAATATAAAAAGGGACTTGACGTTCTTAATATGGGATTAACCACTGTCTTTACTTTGGAGTTCATCCTGAAATTGGCCGCATTTAGGTTTAAGAACTACTTCGGCGATGCTTGGAATACGACGGATTTCATTCTAGTCGTGGGGAGTATCATTGACATACTGGTGACGCAGGTCAACGAAAAAAAGGAGCTCGGAAGTTTCGATGCAAAAACTGAGAAAGGTCCCCTGTCAAAATACATTACGTTCTTTCGTCTCTTCCGGGCCATGAGGTTGATAAAACTCTTATCCAGAGGAGAGAGGATCAGGACTCTCCTGTGGACCTTCATCAAGTCATTCCAGGCTCTACCTTATGTCGCTTTATTGATTGTACTGCTATTCTTCATTTACGCTGTGGTTGGAATGCAGCTTTTCGGAAGAATTTACTTTGACGACGCAGTCATAACTGACCATAATAATTTCCAGACATTTCCGAACGCTCTCATGGTGCTCTTTCGGTCTGCCACAGGTGAAGCATGGCAGGAGATCATGATGGCACTGTCGCCCAATGAATACGAGCGTCCAGGTAATCCGCCTCACTGCATCAAAATCGACACAGACGGCCGCTACGTTGAAGATACAACAGAATGCGGTAGTTGGCTAGCGTTCCCCTACTTCATATCCTTCTCTTTGCTCTGTACATTCTTGATCATTAACTTATTTGTGGCGGTCATCATGGACAACTTTGATTATTTGACGAGAGATTGGTCCATTCTTGGCCCCCATCATCTGGACGAGTTTGTTCGGTTGTGGAGTGAATACGACCCCGACGCTAAAGGCAGGATCAAGCACTTAGACGTGGTGACGTTGCTGAGGAAAATAAGCCCGCCTTTAGGTTTCGGAAAGTTGTGCCCTCACAGGACTGCGTGCAAGCGTCTGGTGTCGATGAACATGCCTCTCAATTCCGACGGGACGGTCAATTTCAACGCGACCCTCTTTGCTGTTGTCCGAACTCAACTCCAAATAAAGACTACAGGTGTAATTGACGAATGCAATACCCAACTCCGCGCGATCATCAAAAGAGTTTGGAAGAGAACTTCTCCCAAGCTCCTGGACCAAGTGGTCCCGCCTCCCGGAGACCCGAACGAGATCACGGTGGGAAAATTCTACGCGACTTTCCTAATTCAAGATTACTTCCGGAGGTTCCGAAAACGAAAGGAGCAGGCTGCAGCCACCAACGTCCAGAAAACCTTCCAGGCTGGTATGAGGACTCTACACGAAGCCGGTCCAGAGCTGAAGAGAGCTATCTCCGGTAACCTAGATGAGATCGTCGAAATTGTGGAGCCTATGCACAGGCGCAACCACACATTATTCGGTGCTGTCCTAGCAAGTATCAAGAAACACGGTCGCGAGAGCTTGTATAGAAGAGAAAAACCACGTCAAGAAGTAAAAAGCTCTGCATCTGGCGATGGACCATCACTGGGCGCCATGATGCGACGGGAGCTTGGCTTGGATGGCAAAATACCTGAGGAAGAAGTGAAAGGTGACGAAGGTAACCACAGCGACGAAGAGATAGCGATGCAGCCTCTCCTTCACGGCAAAGATTCGGAAAGCATTTTCAAAGTTATCGAAAAAACATCCAACGATTTATTGCAGAGTATGCGAAACAACCGTCGTGACAAACAACGTGTACAAACCAACCACGTGCCTTACTGTGTAGAGAATCCTGCGGAGAAATTAATAATAAGGGTGCTGACCGAGCAAGGTCTAGGGAAGTACTGCGACAAAGACTTCATCGAGACCACGCTAAGAGAGATGCGAGAGGCGCTGGACCTAACACCGAACGAGATGGACACTGCTGCCAACCAAATAATAATGCAAGAGAGGATAATGAACGAAGCACAGCATCGACCGAGCGATGTGGAGAGTATTTTGTCAAGGCAGTACCATCCCTTCCACCAGCCTCCGATGCAGCCCCCTCCTAGGAAGAAATAA

Protein

MASIEQTPTVATTPYMENVTDPTLAAAAAAKKQARGRGKAQPEKPKRSLMCLTLDNPLRKLCYSIVEWKPFEYMILTTIFANCIALAVFTPYPFGDTNNTNQILEKVEWVFMVIFTGECIIKIIAYGFFFHPGAYLRNTWNSLDFTIVTIGIASMIQQYLSIDLFDVKALRAFRVLRPLRLVSGVPSLQIVLNSILKAMVPLFHIAFLVLFVIIIYAIIGLELFSGVLHETCFNNETGETMANPAPCSSTQGDGMKCKDNMTCKGYWDGPNDGITNFDNIGYAMLTVFQCITLEGWTDIMYAVANVKGKTWVWIYFVTLVIFGNFFVMNLILGVLSGEFSKEREKAKSRGDFQKSRERQQLEEDMKGYLNWITVAEELDLENEQTQNEDDQDAQGKKDRKSNEESQNNLNVNGDQVQTSRSYRFDKVNRRLRRACRIAVKTQTFYWAIIILVFLNTLVLATEHYNQPRWLDYFQNYANYFFVVLFTLEMMLKMYALGFQGYFVSLFNRFDCFIMVCSVVELALTLTETIPQLGISVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIFSLLLLLFLFIVIFALLGMQVFGGRFDYAPEAEKERHNFDSFWQAVLTMFQILTGEDWNVVMYEGIKAYGGAGTPGMLASIYFIVIFICGNYILLNVFLAIAVDNLGDAEEMDAIEKQKEMAENAEAGNVVLDEERGETDDEYVNEEEGYSNEGSENECEETGSEEDVEEQEQEEKENPQDILVTIDKKQNGDVNKKESEPHVTISARPRRLSDVNIKTQEKPIPDASSFFILSKDNCFRVACYNIQKNSWFKNLILICILASSVMLALEDPVTSNLNTPTGINEVLRNVDYFFTAVFTIELLLKLITYGFILHKDSFCRSGFNLLDLLVVIVSFISLDRSNSVNFIKILRVFRVLRPLRAINRAKGLKHVVQCVIVAIKTIGNILLVTNLLQFMFAVMGVQMFKGRFFKCTDITKDNENDCHGTYLIYENGEAITNDRLWLRNKFNFDDVLNGMLTLFTVSTYEGWPALLSTSMDSNKENHGPIENSRPFVAFFYISYIIVIAFFMVNIFVGFVIVTFQKEGEQEFKDCELDKNQRNCIEFALKAKPIRRYIPKHRIQYKTWWFVTSQRFENVIFFFIVLNTIALMMKFHGSKTEYKKGLDVLNMGLTTVFTLEFILKLAAFRFKNYFGDAWNTTDFILVVGSIIDILVTQVNEKKELGSFDAKTEKGPLSKYITFFRLFRAMRLIKLLSRGERIRTLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQLFGRIYFDDAVITDHNNFQTFPNALMVLFRSATGEAWQEIMMALSPNEYERPGNPPHCIKIDTDGRYVEDTTECGSWLAFPYFISFSLLCTFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFVRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRTACKRLVSMNMPLNSDGTVNFNATLFAVVRTQLQIKTTGVIDECNTQLRAIIKRVWKRTSPKLLDQVVPPPGDPNEITVGKFYATFLIQDYFRRFRKRKEQAAATNVQKTFQAGMRTLHEAGPELKRAISGNLDEIVEIVEPMHRRNHTLFGAVLASIKKHGRESLYRREKPRQEVKSSASGDGPSLGAMMRRELGLDGKIPEEEVKGDEGNHSDEEIAMQPLLHGKDSESIFKVIEKTSNDLLQSMRNNRRDKQRVQTNHVPYCVENPAEKLIIRVLTEQGLGKYCDKDFIETTLREMREALDLTPNEMDTAANQIIMQERIMNEAQHRPSDVESILSRQYHPFHQPPMQPPPRKK

Description

Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death.
Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. Encodes a dihydropyridine- and diltiazem-sensitive current in larval body wall muscle. Vital for embryonic development.
Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death (By similarity). MDL-alpha1 encodes a dihydropyridine- and diltiazem-sensitive current in larval body wall muscle.

Similarity

Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.

Keywords

Alternative splicing   Calcium   Calcium channel   Calcium transport   Complete proteome   Glycoprotein   Ion channel   Ion transport   Membrane   Metal-binding   Phosphoprotein   Reference proteome   Repeat   Transmembrane   Transmembrane helix   Transport   Voltage-gated channel  

Feature

chain  Voltage-dependent calcium channel type D subunit alpha-1
splice variant  In isoform B.

Uniprot

A0A2H1V5W4   A0A2A4JH62   A0A0N1ICW1   H9JV40   A0A2A4JHK9   A0A194PPI5   + More
A0A3S2TK45   A0A194PP78   A0A212F4Q3   A0A182J4Y3   A0A0J9R317   Q24270-3   A0A146LAM7   A0A0R1DSB5   M9PD04   A0A0R1DV93   A0A182N8Y2   A5YW88   A0A2H1WBU8   A0A1B6MRB3   A0A0Q9WRS5   A0A1W4VY04   A0A1B6L2C7   A0A1B6KE01   A0A1B6LPL5   A0A336KLA4   A0A1B6MJ45   A0A034V872   A0A084W5P2   A0A3B0K9Z1   A0A1A9W1K3   A0A0R1DN16   A0A2S1ZNL4   A0A0P6IY66   Q16QJ2   A0A1A9ZAA4   A0A1A9YAX7   A0A1W4VXA8   A0A0J9R2K5   A0A0J9R321   A0A182RAG6   A0A336MCG2   A0A336KKI5   A0A336MHW1   A0A336MC97   B3MKY4   A0A336MGI3   A0A1I8NY94   A0A1I8NYA2   A0A1I8NWX6   Q25452   A0A1A9UT84   A0A0A9X2A8   A0A139WPC9   A0A0A9WYS4   E0VY79   T1GVR3   A0A2S2Q3V7   A0A1W4X2P7   A0A0A9WWT5   A0A0A9WZR4   A0A2S1WM49   A0A0N5DJ56   A0A1W4X2N9   A0A1W4WRY0   A0A0J9R2K9   A0A1W4X2W4   A0A1W4WRY1   A0A0V1ME06   A0A182N8Y0   A0A0V1MD94   A0A0N5AZQ0   W5JR46   A0A0K0F0E8   A0A0N5BCI2   A0A0K0E6W3   A0A090MQP3   A0A2A2KHM2   A0A3Q2UF34   A0A2A2KHQ8   A0A0V1BDZ5   W5KJY4   A0A182MQB5   A0A0K8V6G5   A0A1B6J310   A0A1B6K0F5   A0A1B6IYS2   A0A1B6JJV1  

Pubmed

26354079    19121390    22118469    22936249    7869089    10471707    + More
10731132    12537572    12537569    9502794    9539432    26823975    17994087    17550304    12537568    12537573    12537574    16110336    17569856    17569867    25348373    24438588    26999592    17510324    8313972    25401762    18362917    19820115    20566863    20920257    23761445    15592404    25329095   

EMBL

ODYU01000836    SOQ36207.1    NWSH01001536    PCG70924.1    LADJ01044508    KPJ21426.1    + More
BABH01026241    BABH01026242    PCG70923.1    KQ459597    KPI95222.1    RSAL01000085    RVE48330.1    KPI95241.1    AGBW02010326    OWR48711.1    CM002910    KMY90461.1    U00690    AE014134    AY058268    GDHC01013994    JAQ04635.1    CM000157    KRJ98658.1    AGB93019.1    KRJ98662.1    EF595743    ABQ88369.1    ODYU01007597    SOQ50517.1    GEBQ01001497    JAT38480.1    CH963913    KRF98665.1    GEBQ01022182    JAT17795.1    GEBQ01030306    JAT09671.1    GEBQ01014334    JAT25643.1    UFQS01000565    UFQT01000565    SSX05001.1    SSX25363.1    GEBQ01004055    JAT35922.1    GAKP01019444    GAKP01019436    JAC39516.1    ATLV01020677    KE525304    KFB45536.1    OUUW01000006    SPP82466.1    KRJ98660.1    MF359245    AWK26948.1    GDUN01001113    JAN94806.1    CH477747    EAT36648.1    KMY90457.1    KMY90463.1    UFQT01000900    SSX27916.1    SSX04999.1    SSX25361.1    SSX27917.1    SSX27915.1    CH902620    EDV30642.2    SSX27913.1    Z31723    GBHO01030681    JAG12923.1    KQ971307    KYB29717.1    GBHO01030685    JAG12919.1    DS235844    EEB18335.1    CAQQ02090988    CAQQ02090989    CAQQ02090990    CAQQ02090991    GGMS01003201    MBY72404.1    GBHO01030682    JAG12922.1    GBHO01030683    JAG12921.1    MG973401    AWJ68254.1    KMY90462.1    JYDO01000127    KRZ69843.1    KRZ69841.1    ADMH02000580    ETN65778.1    LN609399    CEF60493.1    LIAE01008608    PAV73407.1    AADN05000356    AC171014    PAV73408.1    JYDH01000055    KRY35332.1    AXCM01000634    GDHF01017792    JAI34522.1    GECU01014145    JAS93561.1    GECU01002798    JAT04909.1    GECU01015631    JAS92075.1    GECU01008269    JAS99437.1   

Proteomes

UP000218220    UP000053240    UP000005204    UP000053268    UP000283053    UP000007151    + More
UP000075880    UP000000803    UP000002282    UP000075884    UP000007798    UP000192221    UP000030765    UP000268350    UP000091820    UP000008820    UP000092445    UP000092443    UP000075900    UP000007801    UP000095300    UP000095301    UP000078200    UP000007266    UP000009046    UP000015102    UP000192223    UP000046395    UP000054843    UP000046393    UP000000673    UP000035680    UP000046392    UP000035681    UP000218231    UP000000539    UP000054776    UP000018467    UP000075883   

PRIDE

H9JV40    Q24270    Q25452   

Pfam

PF16905   GPHH        + More
PF00520   Ion_trans
PF08763   Ca_chan_IQ
PF16885   CAC1F_C

Interpro

IPR014873   VDCC_a1su_IQ        + More
IPR027359   Volt_channel_dom_sf       
IPR005821   Ion_trans_dom       
IPR031649   GPHH_dom       
IPR002077   VDCCAlpha1       
IPR005446   VDCC_L_a1su       
IPR031688   CAC1F_C       
IPR000731   SSD       
IPR029033   His_PPase_superfam       
IPR005452   LVDCC_a1dsu       
IPR005451   VDCC_L_a1csu       

SUPFAM

SSF53254   SSF53254       

Gene 3D

1.20.120.350     3.40.50.1240    

ProteinModelPortal

A0A2H1V5W4   A0A2A4JH62   A0A0N1ICW1   H9JV40   A0A2A4JHK9   A0A194PPI5   + More
A0A3S2TK45   A0A194PP78   A0A212F4Q3   A0A182J4Y3   A0A0J9R317   Q24270-3   A0A146LAM7   A0A0R1DSB5   M9PD04   A0A0R1DV93   A0A182N8Y2   A5YW88   A0A2H1WBU8   A0A1B6MRB3   A0A0Q9WRS5   A0A1W4VY04   A0A1B6L2C7   A0A1B6KE01   A0A1B6LPL5   A0A336KLA4   A0A1B6MJ45   A0A034V872   A0A084W5P2   A0A3B0K9Z1   A0A1A9W1K3   A0A0R1DN16   A0A2S1ZNL4   A0A0P6IY66   Q16QJ2   A0A1A9ZAA4   A0A1A9YAX7   A0A1W4VXA8   A0A0J9R2K5   A0A0J9R321   A0A182RAG6   A0A336MCG2   A0A336KKI5   A0A336MHW1   A0A336MC97   B3MKY4   A0A336MGI3   A0A1I8NY94   A0A1I8NYA2   A0A1I8NWX6   Q25452   A0A1A9UT84   A0A0A9X2A8   A0A139WPC9   A0A0A9WYS4   E0VY79   T1GVR3   A0A2S2Q3V7   A0A1W4X2P7   A0A0A9WWT5   A0A0A9WZR4   A0A2S1WM49   A0A0N5DJ56   A0A1W4X2N9   A0A1W4WRY0   A0A0J9R2K9   A0A1W4X2W4   A0A1W4WRY1   A0A0V1ME06   A0A182N8Y0   A0A0V1MD94   A0A0N5AZQ0   W5JR46   A0A0K0F0E8   A0A0N5BCI2   A0A0K0E6W3   A0A090MQP3   A0A2A2KHM2   A0A3Q2UF34   A0A2A2KHQ8   A0A0V1BDZ5   W5KJY4   A0A182MQB5   A0A0K8V6G5   A0A1B6J310   A0A1B6K0F5   A0A1B6IYS2   A0A1B6JJV1  

PDB

5GJW     E-value=0,     Score=2559

KEGG

101740314    K04851 voltage-dependent calcium channel L type alpha-1D | (RefSeq) muscle calcium channel subunit a

GO

GO:0034765   GO:0005891   GO:0005245   GO:0016021   GO:0005244   GO:0005262   GO:0016322   GO:0042045   GO:0019722   GO:0006816   GO:0016324   GO:0070588   GO:0046872   GO:0006936   GO:0016323   GO:0070509   GO:0040017   GO:0045989   GO:0043051   GO:0035545   GO:0003301   GO:0048701   GO:0001947   GO:0008016   GO:0001822   GO:0005216   GO:0006811   GO:0016020   GO:0043565   GO:0003677   GO:0003707   GO:0006281   GO:0006259   GO:0055085  

Subcellular location

Membrane  

Length:

1820

Number of predicted TMHs:

19

Exp number of AAs in TMHs:

425.9204

Exp number, first 60 AAs:

0.01478

Total prob of N-in:

0.55610

outside

1  -  72

TMhelix

73  -  95

inside

96  -  107

TMhelix

108  -  130

outside

131  -  144

TMhelix

145  -  167

inside

168  -  201

TMhelix

202  -  224

outside

225  -  310

TMhelix

311  -  333

inside

334  -  443

TMhelix

444  -  461

outside

462  -  475

TMhelix

476  -  498

inside

499  -  568

TMhelix

569  -  591

outside

592  -  649

TMhelix

650  -  672

inside

673  -  818

TMhelix

819  -  838

outside

839  -  860

TMhelix

861  -  883

inside

884  -  889

TMhelix

890  -  907

outside

908  -  944

TMhelix

945  -  967

inside

968  -  1019

TMhelix

1020  -  1042

outside

1043  -  1061

TMhelix

1062  -  1084

inside

1085  -  1139

TMhelix

1140  -  1157

outside

1158  -  1171

TMhelix

1172  -  1194

inside

1195  -  1278

TMhelix

1279  -  1301

outside

1302  -  1378

TMhelix

1379  -  1401

inside

1402  -  1820

 

 

Pi

264.861805

Theta

158.097867

Tajima's D

0.520532

CLR

0.707547

CSRT

0.524423778811059

Interpretation

Uncertain