Gene

KWMTBOMO15898

Annotation

PREDICTED:_sporozoite_surface_protein_2-like_[Bombyx_mori]

Location

Bomo_Chr27(-):1411633-1416033      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.589

CDS

ATGCGGATTTTGATACTGCTATCCATTTCCGCGGAGCTGGCGCTGACTGCTTCCATAAATGGACGATTATCCAACGATGACGATTTCAAGAGTTATGGAAAAAATGTGGAGCATCAAGAACCGGAAGAAAGAAGAGACTATAACATTCTAAGTGGATTTCCAGATAAGCCTAAAGAGGTAGCCCTTCCTTCAACGGTTGATCTCTTCAACGAATTTGAACCAAGCTTAACCGACAAACTCCATGACCTAACACCACTGAAACATAATCATCATAACGCTGCTACAGCGCCAGGAGTTCCAGATGAGTCTCAATTATCAGCACTGACCTTGATCCCGACAAAACATATCTTCCCGGATCAACCAGATCACCCCGTGAAATCACAACGTTCAAAAAAGCCTGATCATTCAGGGAAACCAGACAAACCTGGTCATCAAGAGAAACCAGACAAACCTGGTCATCAGGAGAAACCCAACAAGCCTGGTCATCACGAGAAACCGAACAAACCTAGTCATCAGGTGAAACCGGACAAACCTAGTCATCAGGAGAAACCGGACAAACCTGGTCATCAGGAGAAACCAAAAAAACCTGATCCTGATCATTTAGAAAAACCCAAGAAACCAGGTAATAATTACAAATCAGAGAAGTCTGATACTTCAGATAAACTAGAGAAGCCAGGCCACCACAAAGAAACAGAAAAATCAGAGAAATTGAGTCCTCTAGAGAAACTTGAGAAACCTGGTCATCACGAAAAACCAGATAAGCCTGATCATTTAGAGAAACTAGGCGCTCACGAAAAACCAGAGACGCCTGACCATTCAAAGAAACCAGGTCATCACGAAAAACCAGGGAAACTTGATCATTTAGAGAAACCAGGACATCACGAAAAACCAGGGAAACCTGATGATTCGGAAAAACCAAAGAAACCAGGACAACATGAAAAACCAGAGAAACCTGATCATTTAGAGAAACCAGAGAAACTAGGTCATCACGAAAAACCAGAAAAACCTCATTCAGAGAAACCAGAGAAGCCAGGCTATCACGGAAACCCAGATAAACCGTATCATCCAAAGAAACCAGGTGATCATGAAAAACCCAAGAAACCTGATCATTCAGAGAAACCAGAGAAACCTGATCATTCAGAGAAACCAGAGAAACCTAGTCATCACGAAAAACCAGAGAAACCTGGTGATGAAAAACCAGAGAAACCTGGTGATGAAAAACCAGAGAAACTTGGTGATGAAAAACCACAGGAACCTCATCATTCAGAAAAACCAGGGAAGCCAGGTCATAACGAAATACCAGGGAAACCAGGTGATGAAAAACCAGAGGAACTTGATCATTTAGAGAAACCAGAGAAACCTACTCATTCAGAGCAATCAGAGAAACCAGGAAATGAAAACCCAGAGAAACCCGATCATTCAGAGAAGCCAGAGAAACCTGGTGATGTAAACCCAGAAAAACCTGATCATTCAGAGAAACCAGAGGAACTTGAGAAGCCAGGTGATGAAAAACCAGAGAAACCAGGCGATCATGAAAAGCCAGAAAAACCTGATCCTTCAGAGAAACCAGAAAGCCCTGATAATTCAGCACATCCAAATTTGTCCGAAAATCCAGATAAACCAGAGAACGACGCCTACGGTTTACCTGGCCCAGAGAAACCAAACCATCCTTAA

Protein

MRILILLSISAELALTASINGRLSNDDDFKSYGKNVEHQEPEERRDYNILSGFPDKPKEVALPSTVDLFNEFEPSLTDKLHDLTPLKHNHHNAATAPGVPDESQLSALTLIPTKHIFPDQPDHPVKSQRSKKPDHSGKPDKPGHQEKPDKPGHQEKPNKPGHHEKPNKPSHQVKPDKPSHQEKPDKPGHQEKPKKPDPDHLEKPKKPGNNYKSEKSDTSDKLEKPGHHKETEKSEKLSPLEKLEKPGHHEKPDKPDHLEKLGAHEKPETPDHSKKPGHHEKPGKLDHLEKPGHHEKPGKPDDSEKPKKPGQHEKPEKPDHLEKPEKLGHHEKPEKPHSEKPEKPGYHGNPDKPYHPKKPGDHEKPKKPDHSEKPEKPDHSEKPEKPSHHEKPEKPGDEKPEKPGDEKPEKLGDEKPQEPHHSEKPGKPGHNEIPGKPGDEKPEELDHLEKPEKPTHSEQSEKPGNENPEKPDHSEKPEKPGDVNPEKPDHSEKPEELEKPGDEKPEKPGDHEKPEKPDPSEKPESPDNSAHPNLSENPDKPENDAYGLPGPEKPNHP

Feature

propeptide  Removed by sortase

Uniprot

A0A1D7YLD9   A0A1H5AG60   A0A2G7FBW8   A0A3Q1JJ73   A0A162LWQ3   A0A2G5DNC1   + More
A0A3Q1IB80   A0A3Q1I3G0   A0A3Q1JHV6   A0A2G5DN99   A0A2G5DNA7   A0A2G5DN97   A0A2G5DND8   A0A2G5DNA4   A0A3Q1JJB8   A0A0K0QP09   A0A3Q1I254   A0A3Q1JIZ0   A0A2G5DN88   A0A397MD90   A0A3D9J0B7   A0A2G5DNB7   A0A2G5DNC4   A0A2G5DNA1   A0A2G5DNB2   A0A2J7QN61   A0A0N0U4M6   A0A2G5DND0   A0A2G5DP16   A0A1S4DJW0   A0A1S4DJL2   A0A1S4DJK7   A0A1S4DJI6   A0A1S4DJL8   A0A1S4DJV0   A0A1S4DJK2   A0A1S4DJI1   A0A2U9C3E2   A0A1S4DJI5   A0A1S4DJM4   A0A1S4DJV5   A0A2G5DNB9   A0A2G5DNA8   A0A195D738   A0A139QNU6   F9LVS0   A0A1U7VRP7   A0A0T6B0P7  

Pubmed

27071652    24807620    23773524   

EMBL

CP017248    AOR36413.1    FNTN01000001    SED41232.1    PEFT01000001    PIG78118.1    + More
AZHC01000007    OAA46080.1    KZ305034    PIA44993.1    PIA45000.1    PIA45001.1    PIA44991.1    PIA44986.1    PIA44995.1    CP012103    AKR13228.1    PIA44990.1    QXCZ01000001    RIA22976.1    QREB01000001    RED66726.1    PIA44998.1    PIA44999.1    PIA44992.1    PIA45002.1    NEVH01013199    PNF30024.1    KQ435827    KOX71924.1    PIA45003.1    PIA44987.1    CP026254    AWP10603.1    PIA44989.1    PIA44988.1    KQ976750    KYN08705.1    LQZB01000149    KXU04230.1    AFUB01000019    EGU68650.1    LJIG01016296    KRT81027.1   

Proteomes

UP000094960    UP000199275    UP000229013    UP000265040    UP000243498    UP000230069    + More
UP000036807    UP000266543    UP000256580    UP000235965    UP000053105    UP000084051    UP000246464    UP000078542    UP000070353    UP000003858    UP000189701   

Pfam

PF15140   DUF4573        + More
PF01391   Collagen
PF04702   Vicilin_N
PF00190   Cupin_1
PF00746   Gram_pos_anchor
PF02973   Sialidase
PF13088   BNR_2
PF04650   YSIRK_signal
PF00754   F5_F8_type_C
PF07501   G5
PF03160   Calx-beta
PF01120   Alpha_L_fucos

Interpro

IPR027856   DUF4573        + More
IPR008160   Collagen       
IPR006792   Vicilin_N       
IPR014710   RmlC-like_jellyroll       
IPR011051   RmlC_Cupin_sf       
IPR006045   Cupin_1       
IPR000618   Insect_cuticle       
IPR019931   LPXTG_anchor       
IPR019948   Gram-positive_anchor       
IPR004124   Glyco_hydro_33_N       
IPR026856   Sialidase_fam       
IPR011040   Sialidase       
IPR005877   YSIRK_signal_dom       
IPR036278   Sialidase_sf       
IPR013320   ConA-like_dom_sf       
IPR017853   Glycoside_hydrolase_SF       
IPR000421   FA58C       
IPR011098   G5_dom       
IPR009003   Peptidase_S1_PA       
IPR000933   Glyco_hydro_29       
IPR003644   Calx_beta       
IPR008979   Galactose-bd-like_sf       
IPR038081   CalX-like_sf       
IPR033336   SAXO1/2       

SUPFAM

SSF51182   SSF51182        + More
SSF49899   SSF49899       
SSF50939   SSF50939       
SSF51445   SSF51445       
SSF50494   SSF50494       
SSF49785   SSF49785       
SSF141072   SSF141072       

Gene 3D

2.60.120.10     2.60.120.260     2.60.40.2030    

ProteinModelPortal

A0A1D7YLD9   A0A1H5AG60   A0A2G7FBW8   A0A3Q1JJ73   A0A162LWQ3   A0A2G5DNC1   + More
A0A3Q1IB80   A0A3Q1I3G0   A0A3Q1JHV6   A0A2G5DN99   A0A2G5DNA7   A0A2G5DN97   A0A2G5DND8   A0A2G5DNA4   A0A3Q1JJB8   A0A0K0QP09   A0A3Q1I254   A0A3Q1JIZ0   A0A2G5DN88   A0A397MD90   A0A3D9J0B7   A0A2G5DNB7   A0A2G5DNC4   A0A2G5DNA1   A0A2G5DNB2   A0A2J7QN61   A0A0N0U4M6   A0A2G5DND0   A0A2G5DP16   A0A1S4DJW0   A0A1S4DJL2   A0A1S4DJK7   A0A1S4DJI6   A0A1S4DJL8   A0A1S4DJV0   A0A1S4DJK2   A0A1S4DJI1   A0A2U9C3E2   A0A1S4DJI5   A0A1S4DJM4   A0A1S4DJV5   A0A2G5DNB9   A0A2G5DNA8   A0A195D738   A0A139QNU6   F9LVS0   A0A1U7VRP7   A0A0T6B0P7  

KEGG

101740177    no KO assigned | (RefSeq) sporozoite surface protein 2-like

GO

GO:0016021   GO:0045735   GO:0005581   GO:0042302   GO:0005576   GO:0052795   GO:0005975   GO:0052796   GO:0052794   GO:0005618   GO:0004560   GO:0007154   GO:0008017  

PANTHER

PTHR10628   PTHR10030   PTHR31516  

Subcellular location

  
Secreted  

SignalP

Position:   1 - 16,         Likelihood:  0.944929

 

 

Length:

557

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03351

Exp number, first 60 AAs:

0.03351

Total prob of N-in:

0.00192

outside

1  -  557

 

 

Pi

240.85668

Theta

174.880048

Tajima's D

0.727055

CLR

0.224269

CSRT

0.580270986450677

Interpretation

Uncertain