Silkworm Genome Informatics Database

Gene

KWMTBOMO15889

Pre Gene Modal

BGIBMGA013375

Annotation

PREDICTED:_uncharacterized_protein_LOC101735325_[Bombyx_mori]

Location

Bomo_Chr27(+):712142-715395 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.776

CDS

ATGAAAGCCAAGCTGTCGGGTGCTGTAGCCGCAGCAGCGAAACAAGCCGCCAACTCAGAGCAACTGGCTGCGGCCTTTACTGATTACATTGCTGATATAGCTAGTTCTGACTACGGAAGTAATGGAGAAAAAAGAGAACTACTCCTAGCCCATCTATACAAATTGGTGGATCTCATGAAGATACTCTCTCTGACCGTCAATAAAAGAGTTGCGACATGGCAACCAGTTGAAGATCCTGAAGTGAGCCGTATTACCGAACAAATCCTACGGGAAATTGAGAATCCCGAAAGTAAATTTTCCGCAGCCGAGTCCTCGGCACAGAACCAACTGTTCAGCGCCGACAACGCTTATCAGATGTTGTTGCCCAACGACAAAATAAAGATCATTGACGAACAGAAATTGAACAAGAAACTTCATCAGTATTCGTCAAAGCTAAGCGGGACGTGCACCGATATTCTCCAGAGTCTGTCCCAGCCATCAAGTCTGCCGCAAGTCCTGGCTGGTGCTGTTCACAGCGCTGCACAACTAGGGGACGTCGCTCGAGCTCACAGGAACAAGGATCCCGTGCACAACTCCAGAATTGAAGACGCAATACAGGATTTGTCCTTCGCCACTTATAATGTCCTTAAGACCGCCGAGTATGCTAGTCGGGTAAACATTAATATTATAATATAA

Protein

MKAKLSGAVAAAAKQAANSEQLAAAFTDYIADIASSDYGSNGEKRELLLAHLYKLVDLMKILSLTVNKRVATWQPVEDPEVSRITEQILREIENPESKFSAAESSAQNQLFSADNAYQMLLPNDKIKIIDEQKLNKKLHQYSSKLSGTCTDILQSLSQPSSLPQVLAGAVHSAAQLGDVARAHRNKDPVHNSRIEDAIQDLSFATYNVLKTAEYASRVNINIII

Uniprot

H9JV12 A0A1Z2RRF7 A0A0N0PCT8

Pubmed

19121390 28605547 26354079

EMBL

BABH01037495 BABH01037496 BABH01037497 BABH01037498 KY924783 ASA46437.1 + More
KQ460466 KPJ14605.1

Proteomes

UP000005204 UP000053240

PRIDE

H9JV12

Pfam

PF01044   Vinculin        + More
PF00373   FERM_M
PF09379   FERM_N
PF16511   FERM_f0
PF09141   Talin_middle

Interpro

IPR006077   Vinculin/catenin        + More
IPR036723   Alpha-catenin/vinculin-like_sf
IPR017997   Vinculin
IPR032425   FERM_f0
IPR014352   FERM/acyl-CoA-bd_prot_sf
IPR019749   Band_41_domain
IPR035963   FERM_2
IPR018979   FERM_N
IPR019748   FERM_central
IPR011993   PH-like_dom_sf
IPR036476   Talin_cent_sf
IPR015224   Talin_cent
IPR000299   FERM_domain
IPR035964   I/LWEQ_dom_sf

SUPFAM

SSF47220   SSF47220        + More
SSF47031   SSF47031
SSF109885   SSF109885
SSF109880   SSF109880

Gene 3D

1.20.80.10 2.30.29.30

CDD

cd14473 FERM_B-lobe

ProteinModelPortal

H9JV12 A0A1Z2RRF7 A0A0N0PCT8

KEGG

101735325 no KO assigned | (RefSeq) uncharacterized LOC101735325

GO

GO:0051015 GO:0007155 GO:0007016 GO:0005856 GO:0005200 GO:0005925 GO:0001726

PANTHER

PTHR46180

Length:

224

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00666999999999998

Exp number, first 60 AAs:

0.00466

Total prob of N-in:

0.07909

outside

1 - 224

Pi

273.562573

Theta

147.461674

Tajima's D

2.627345

CLR

1.26757

CSRT

0.955002249887506

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics